prot_Ecto-sp13_S_contig14041.3152.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14041.3152.1
Unique Nameprot_Ecto-sp13_S_contig14041.3152.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length77
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14041.3152.1 vs. uniprot
Match: D8LKR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR0_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.660e-11
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:   35 ATDAMTMAAADEANPLAHPDALRRRRTLRDAGLAAKAK 72
            A DAMTMAAADEANPLAHPDALRRRRTLRDAGLAAKAK
Sbjct:  236 AKDAMTMAAADEANPLAHPDALRRRRTLRDAGLAAKAK 273
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14041.3152.1 vs. uniprot
Match: A0A6H5L5F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5F4_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 1.890e-9
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 0 
Query:   39 MTMAAADEANPLAHPDALRRRRTLRDAGLAAKAK 72
            MTMAAA+EANPLAHPD LRRRRTLRDAGLAAKAK
Sbjct:    1 MTMAAANEANPLAHPDVLRRRRTLRDAGLAAKAK 34
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14041.3152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKR0_ECTSI1.660e-1197.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5F4_9PHAE1.890e-994.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14041contigEcto-sp13_S_contig14041:211..851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14041.3152.1mRNA_Ecto-sp13_S_contig14041.3152.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14041 2..851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14041.3152.1 ID=prot_Ecto-sp13_S_contig14041.3152.1|Name=mRNA_Ecto-sp13_S_contig14041.3152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bp
MSGSGALESLLVTSSPLRERELSFSGGLSHRNAAATDAMTMAAADEANPL
AHPDALRRRRTLRDAGLAAKAKAAAAA
back to top