prot_Ecto-sp13_S_contig1404.3149.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1404.3149.1
Unique Nameprot_Ecto-sp13_S_contig1404.3149.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length867
Homology
BLAST of mRNA_Ecto-sp13_S_contig1404.3149.1 vs. uniprot
Match: D8LGY8_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY8_ECTSI)

HSP 1 Score: 1043 bits (2696), Expect = 0.000e+0
Identity = 702/888 (79.05%), Postives = 709/888 (79.84%), Query Frame = 0
Query:   23 MPVLESAVGLDASFARPRAVETRDEQVEQEEQKIRQESHEQQPYEGGASLHDVKRALRNNFRATGVMDDVTARLRRQFVLELRRKGLGVPGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLASNGLMHSLAVFLPESGLGGGXXXXXXXXXXXXXXXAAPAAEAALSREDVLQALPIPADSALFRRVIRRAEEGEGNDAGPACRSDGETAAVPGTAAGVDAAVVSNAS-AVPAAGSGGHAGXXXXXXXXXXXXXQNRICGLLEALVGEVATRSRAVAVDSNTQTDEAGRSHKENLVTRLEAVRETWLRRSADERREPAQDVTERMLAYQRECESRAAAQAGCW------IKVERDSFRERDLAALRVQMAXXXXXXXXXXXXXXXXXXDARVERLQETERDRXXXXXXXXXXXXXXXXXXXXXXXXXMDLLRAREQAREACLCEIRRSAELDSRGVRAEELRLRDLAVSLEARAEEVRRREREGARGREDALQAARHEARQSLEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------SQHAETSXXXXXXXXXXXXXXXXXXXAEAEAERAAEQAAVYKEAYQMRREVTVEGDRAFVRLGRQELEGRVRSLEASMEEETTRQAKSLRKATEERDALKAEAIRLRERERQWEAEATKLRQALSSAELDRADRAEHRAEEEECERFALDGQVEELRAALRRSRDAIEAIRLCDVEAEASSTXXXXXXXXXXXXXXXXXXXXXXAERDAVRIDPGGHHLHGSTHFGAGWTGSPGQEHDRRVRGGEDGRRWNGSWEQPDGAVAGGAPGAGEFEPAPFFFRRRGGG-DRAWSPAEGAVREYHERGWLDGGGGEWV 867
            MPVLESAV  + SFA PR VETRDEQ EQEEQKIRQESHEQQP EGGASLHDVKRALR+NFRATGV+DDVTARLRRQFVLELRRKGLGVPGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLASNGL+ SLAVFLPESGLGGG               AAPAAEAALSREDVLQALPIPADS LFRRVIRRAEEGEG  AG  CRSDGETAAVPG AAG D AVVSNAS AV          XXXXXXXXXX   Q R+CGLLEALVGEVATRSRAVAVDSNTQTDEAGRSHKENLVTRLEAVRETWLRRSADERREPAQDVTERMLAYQRECESRAAAQA CW      IK ERDSFRERDLAALRVQMA                  DARVERLQETERDR XXXXXXXXXXXXXXXXXXXXXXXXMDLLR REQ       E+RRSAELDSRGVRAEELRLRDLAVSLEARAEEVRRREREGARGREDALQAARHEARQSLEVK                                                                SQHAETS    XXXXXXXXXXX    AEAEAERAAEQAAVYKEAYQMRREVTVEGDRAFVRLGRQELEGRVRSLEASMEEE  RQAKSLRKATEERDALKAEA RLRERERQWEA      QALSSAELDR DRAEHRAEEEECER ALDGQVEELRAALRRSRDAIEAIRLCDVEAEA   XXXXXXXXXXXXXXXXXXXXX AERDAVR DP G  LHGSTHFGAGWTGSPGQEH RRVRGGEDGRRWNGSW QPDGA+AGGAPG GEFEPAPFFFRRRGGG DR WSPAE AVREYHERG LDGGGGEWV
Sbjct:    1 MPVLESAVESEVSFALPRVVETRDEQAEQEEQKIRQESHEQQPNEGGASLHDVKRALRDNFRATGVIDDVTARLRRQFVLELRRKGLGVPGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLASNGLLQSLAVFLPESGLGGGSNCGNTATVGTGPG-AAPAAEAALSREDVLQALPIPADSNLFRRVIRRAEEGEGKAAGSVCRSDGETAAVPGAAAGADTAVVSNASVAVXXXXXXXXXXXXXXXXXXXXSREQKRVCGLLEALVGEVATRSRAVAVDSNTQTDEAGRSHKENLVTRLEAVRETWLRRSADERREPAQDVTERMLAYQRECESRAAAQASCWVAPRLLIKAERDSFRERDLAALRVQMASTRRREVDAMRKELQSQYDARVERLQETERDREXXXXXXXXXXXXXXXXXXXXXXXXMDLLRTREQ-------EVRRSAELDSRGVRAEELRLRDLAVSLEARAEEVRRREREGARGREDALQAARHEARQSLEVKEEGVARERCGVVGRGWEKRGEGGGGGGTGFPGGIAVLDHQRSEEFLKKEMEAVRAERKACQEQLSQHAETSRALQXXXXXXXXXXXRATAAEAEAERAAEQAAVYKEAYQMRREVTVEGDRAFVRLGRQELEGRVRSLEASMEEERARQAKSLRKATEERDALKAEATRLRERERQWEAXXXXXXQALSSAELDR-DRAEHRAEEEECERSALDGQVEELRAALRRSRDAIEAIRLCDVEAEAXXXXXXXXXXXXXXXXXXXXXXXX-AERDAVRTDPTGQLLHGSTHFGAGWTGSPGQEHHRRVRGGEDGRRWNGSWGQPDGAMAGGAPGVGEFEPAPFFFRRRGGGGDRPWSPAEEAVREYHERGRLDGGGGEWV 878          
BLAST of mRNA_Ecto-sp13_S_contig1404.3149.1 vs. uniprot
Match: A0A6H5KLA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA2_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 6.110e-87
Identity = 199/236 (84.32%), Postives = 203/236 (86.02%), Query Frame = 0
Query:  633 MEEETTRQAKSLRKATEERDALKAEAIRLRERERQWEAEATKLRQALSSAELDRADRAEHRAEEEECERFALDGQVEELRAALRRSRDAIEAIRLCDVEAEASSTXXXXXXXXXXXXXXXXXXXXXXAERDAVRIDPGGHHLHGSTHFGAGWTGSPGQEHDRRVRGGEDGRRWNGSWEQPDGAVAGGAPGAGEFEPAPFFFRRRGGG-DRAWSPAEGAVREYHERGWLDGGGGEWV 867
            MEEE  RQAKSLRK TEERDALKAEA RLRERERQWE      RQALSSAELDR DRAEHRAEEEECER ALDGQV+ELRAALRRSRDAIEAIRLCDVEAEA   XXXXXXXXXXXXXXXXXXXXXXAERDAVR DP GH+L  +THFG  WT SPGQEH RRVRGGEDGRR + SW QPDGAVAGGA G GEFEP P FFRRRGGG DRAWSPAEGAVREYHE G LDGGGGEWV
Sbjct:    1 MEEEKARQAKSLRKVTEERDALKAEATRLRERERQWEXXXXXXRQALSSAELDR-DRAEHRAEEEECERSALDGQVQELRAALRRSRDAIEAIRLCDVEAEAXXXXXXXXXXXXXXXXXXXXXXXXXAERDAVRTDPAGHYLRDTTHFG--WTRSPGQEHHRRVRGGEDGRRRDESWGQPDGAVAGGARGVGEFEPVPVFFRRRGGGGDRAWSPAEGAVREYHEGGRLDGGGGEWV 233          
BLAST of mRNA_Ecto-sp13_S_contig1404.3149.1 vs. uniprot
Match: A0A835Z6Y0_9STRA (LisH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Y0_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.840e-14
Identity = 49/95 (51.58%), Postives = 62/95 (65.26%), Query Frame = 0
Query:   71 SLHDVKRALRNNFRATGVMDDVTARLRRQFVLELRRKGLGVPGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLASNGLMHSLAVFLPESG 165
            SLH+++  LR +FR TGV+ D+TARLRRQFV EL +   G P A +A VA       R  S + L +R L +LV D L + GL+ SLAVFLPESG
Sbjct:   18 SLHELRDRLRTSFRETGVLADITARLRRQFVAELVQHHHGPP-AMKALVA------NRQISELPLTQRQLRNLVADFLRAQGLLQSLAVFLPESG 105          
BLAST of mRNA_Ecto-sp13_S_contig1404.3149.1 vs. uniprot
Match: A0A8J5XHD4_DIALT (LisH domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XHD4_DIALT)

HSP 1 Score: 58.9 bits (141), Expect = 4.510e-5
Identity = 43/95 (45.26%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   74 DVKRALRNNFRATGVMDDVTARLRRQFVLELRRKGLGVPGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLASNGLMHSLAVFLPESGLGG 168
            ++ RAL++     GV+D + A+LR + +  LR  GLG  GA   A  AG   RR      SL E    SLV  HL + GL+HSLAVFLPE+GL G
Sbjct:   11 ELARALKSG----GVLDSMRAQLRARLLEHLRTDGLG--GALAPAARAGG--RRALARAPSLAEAAELSLVAHHLQALGLVHSLAVFLPEAGLDG 97          
BLAST of mRNA_Ecto-sp13_S_contig1404.3149.1 vs. uniprot
Match: G5A2S0_PHYSP (LisH domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A2S0_PHYSP)

HSP 1 Score: 53.9 bits (128), Expect = 6.590e-5
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 0
Query:   71 SLHDVKRALRNNFRATGVMDDVTARLRRQFVLEL---RRKGLGVPGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLASNGLMHSLAVFLPESG 165
            SL ++K  +  + R  G ++ + A+LRR+F+ +L   RR      G   A+      R  RS   ++  E+++H LV ++LAS GL ++LAVF+PE G
Sbjct:   21 SLEELKEGMFQSIRDNGTVELIRAQLRRRFIEKLQQQRRLRDDQDGENNAS------RANRSTQSLTPDEKLVHGLVAEYLASKGLENTLAVFVPEIG 112          
BLAST of mRNA_Ecto-sp13_S_contig1404.3149.1 vs. uniprot
Match: A0A2P4X145_9STRA (LisH domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X145_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 8.770e-5
Identity = 32/95 (33.68%), Postives = 56/95 (58.95%), Query Frame = 0
Query:   71 SLHDVKRALRNNFRATGVMDDVTARLRRQFVLELRRKGLGVPGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLASNGLMHSLAVFLPESG 165
            SL + K  +  + R  G ++ + A+LRR+F+ +L+++        +  VAA   R  R  +  +  E+++H LV ++LAS GL ++LAVF+PE G
Sbjct:   21 SLEEFKEGMFQSIRDNGTVELIRAQLRRRFIEKLQQQRRLNDDHDQENVAA---RANRDATSSTPDEKLVHGLVAEYLASKGLENTLAVFVPEIG 112          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1404.3149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LGY8_ECTSI0.000e+079.05LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KLA2_9PHAE6.110e-8784.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6Y0_9STRA2.840e-1451.58LisH domain-containing protein (Fragment) n=1 Tax=... [more]
A0A8J5XHD4_DIALT4.510e-545.26LisH domain-containing protein n=1 Tax=Diacronema ... [more]
G5A2S0_PHYSP6.590e-534.69LisH domain-containing protein n=1 Tax=Phytophthor... [more]
A0A2P4X145_9STRA8.770e-533.68LisH domain-containing protein n=1 Tax=Phytophthor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 42..62
NoneNo IPR availableCOILSCoilCoilcoord: 644..685
NoneNo IPR availableCOILSCoilCoilcoord: 565..599
NoneNo IPR availableCOILSCoilCoilcoord: 401..421
NoneNo IPR availableCOILSCoilCoilcoord: 619..639
NoneNo IPR availableCOILSCoilCoilcoord: 520..561
NoneNo IPR availablePANTHERPTHR39063FAMILY NOT NAMEDcoord: 287..737
coord: 62..166
IPR006594LIS1 homology motifSMARTSM00667Lishcoord: 136..168
e-value: 0.0048
score: 26.1
IPR006594LIS1 homology motifPFAMPF16045LisH_2coord: 140..167
e-value: 1.0E-10
score: 40.5
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 136..168
score: 9.188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1404contigEcto-sp13_S_contig1404:2..7851 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1404.3149.1mRNA_Ecto-sp13_S_contig1404.3149.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1404 2..7851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1404.3149.1 ID=prot_Ecto-sp13_S_contig1404.3149.1|Name=mRNA_Ecto-sp13_S_contig1404.3149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=867bp
GGVQPICLVLVGSITRQLYATPMPVLESAVGLDASFARPRAVETRDEQVE
QEEQKIRQESHEQQPYEGGASLHDVKRALRNNFRATGVMDDVTARLRRQF
VLELRRKGLGVPGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLAS
NGLMHSLAVFLPESGLGGGSSSSSSTATVGTGPGAAPAAEAALSREDVLQ
ALPIPADSALFRRVIRRAEEGEGNDAGPACRSDGETAAVPGTAAGVDAAV
VSNASAVPAAGSGGHAGAASSGGGGGGSSQQNRICGLLEALVGEVATRSR
AVAVDSNTQTDEAGRSHKENLVTRLEAVRETWLRRSADERREPAQDVTER
MLAYQRECESRAAAQAGCWIKVERDSFRERDLAALRVQMASTRRREVDAM
RKELQSQYDARVERLQETERDRERRHNNRMREAEVSQFEARQNLLREMDL
LRAREQAREACLCEIRRSAELDSRGVRAEELRLRDLAVSLEARAEEVRRR
EREGARGREDALQAARHEARQSLEVKEEGVAREREFLKQEMEAVRAERKA
CQEQLSQHAETSRALQEARSDALAQEARATAAEAEAERAAEQAAVYKEAY
QMRREVTVEGDRAFVRLGRQELEGRVRSLEASMEEETTRQAKSLRKATEE
RDALKAEAIRLRERERQWEAEATKLRQALSSAELDRADRAEHRAEEEECE
RFALDGQVEELRAALRRSRDAIEAIRLCDVEAEASSTSAAAAAATTAAAA
AAASTAAAAAERDAVRIDPGGHHLHGSTHFGAGWTGSPGQEHDRRVRGGE
DGRRWNGSWEQPDGAVAGGAPGAGEFEPAPFFFRRRGGGDRAWSPAEGAV
REYHERGWLDGGGGEWV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006594LisH