Homology
BLAST of mRNA_Ecto-sp13_S_contig10317.315.1 vs. uniprot
Match:
D7G4J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J5_ECTSI)
HSP 1 Score: 597 bits (1538), Expect = 1.420e-207
Identity = 329/369 (89.16%), Postives = 342/369 (92.68%), Query Frame = 1
Query: 1 RAGTREESASPELVGVTREQRKREGSGASVSSLRSPSTPSGRRASGGPLSRLLPAPTGSIGSEGGDVSTGSDNKSVKAEVLAEEQPASTAAAPSGGSGNLAKKKKTFMEKFGDMLEAAAETAIPAAPGGGGVGYGSRAATARPREWEQWDAAPLLEFMKEEARTAADKARKEEIARTGGDKDKLVALVKAWYTPFLSQAEFVRQKEALTTQHVGMVDDSGRCVSAKSSSVASPVRGRRGGEGGPPSAAIGSADISPGLFLSRRSRAKNASPTSTKPGDPLRLSRAPEESGLELGGGDLDTASARSAAAGAPAGEGSGGISRAVVVGYVVDGGGGWGKVGSASCRDIHYLVEVEASSAEGGTRSWACYKR 1107
RAGTREESASPELVG TREQRKREGSGASV+SLRSPSTPSGRRASGGPLSRL+PAPTGSI SEGGDVSTGSDNKSVK++VLAEEQPASTAAAPSGGSGNLAKKKKTFMEKFGDMLEAAAETAIPAAPGGGGVGYGSRAATA PREWEQWDA LLEFMKEEARTAADKARKE+IARTGGDKDKLVALVK WYTPFLSQAEF+RQKEALTTQHVG VD+SGRCVSAK+SS+ASPVRGRRGGEGGP S AIGSAD+SPGLFLSRRSRAK+ SP STKPGD LRLS APEESGLELGGG DTASARSAAAG EG+GGI RAVVVGYVVDGGGGW KVGSA RDIH+LVEVE SA GGTR WACYKR
Sbjct: 343 RAGTREESASPELVGFTREQRKREGSGASVTSLRSPSTPSGRRASGGPLSRLMPAPTGSIVSEGGDVSTGSDNKSVKSDVLAEEQPASTAAAPSGGSGNLAKKKKTFMEKFGDMLEAAAETAIPAAPGGGGVGYGSRAATAGPREWEQWDAPLLLEFMKEEARTAADKARKEDIARTGGDKDKLVALVKTWYTPFLSQAEFIRQKEALTTQHVGTVDNSGRCVSAKTSSLASPVRGRRGGEGGPLSPAIGSADLSPGLFLSRRSRAKDTSPRSTKPGDALRLSPAPEESGLELGGGVFDTASARSAAAG----EGAGGIYRAVVVGYVVDGGGGWRKVGSAFSRDIHFLVEVEVFSAGGGTRFWACYKR 707
BLAST of mRNA_Ecto-sp13_S_contig10317.315.1 vs. uniprot
Match:
A0A6H5JC90_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC90_9PHAE)
HSP 1 Score: 534 bits (1376), Expect = 8.330e-175
Identity = 304/377 (80.64%), Postives = 312/377 (82.76%), Query Frame = 1
Query: 151 RLLPAPTGSIGSEGGDVSTGSDNKSVKAEVLAEEQPASTAAAPSGGSGNLAKKKKTFMEKFGDMLEAAAETAIPAAPGGGGVG-------------------------------------YGSRAATARPREWEQWDAAPLLEFMKEE--ARTAADKARKEEIARTGGDKDKLVALVKAWYTPFLSQAEFVRQKEALTTQHVGMVDDSGRCVSAKSSSVASPVRGRRGGEGGPPSAAIGSADISPGLFLSRRSRAKNASPTSTKPGDPLRLSRAPEESGLELGGGDLDTASARSAAAGAPAGEGSGGISRAVVVGYVVDGGGGWGKVGSASCRDIHYLVEVEASSAEGGTRSWACYKRFSDFRALWTGMSRRYPRME 1164
RLLPAPT SI SEGGDVSTGSDNKSVKA+VLAEEQP+S AAAPSGGSGNLAK KKTFMEKFGDMLEAAAETAIPAAPGGGGVG YGSRAATA PREWEQWDAAPLLEFMKEE AR ADK RKEEIARTGGDKDKLVALVKAWYTPFLSQAEF+RQKE L TQHVGMVDDSGRCVSAKSSS+ASPVRGRRG SAAIGS+DISPGLFLSRRSRA+NASP STKPGD LRLS APEESGLELGGG LDTASARSAA GAPAGEGSGGI RAVVVGYVVDGGGG G+V SAS RDIHYLVEVEASSA GGTRSWACYKRFSDFRALWTG+SRRYPRME
Sbjct: 3 RLLPAPTASIVSEGGDVSTGSDNKSVKADVLAEEQPSSMAAAPSGGSGNLAK-KKTFMEKFGDMLEAAAETAIPAAPGGGGVGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGVGYGSRAATAGPREWEQWDAAPLLEFMKEETQARMTADKVRKEEIARTGGDKDKLVALVKAWYTPFLSQAEFIRQKEVLATQHVGMVDDSGRCVSAKSSSLASPVRGRRGXXXXXXSAAIGSSDISPGLFLSRRSRARNASPRSTKPGDALRLSPAPEESGLELGGGVLDTASARSAAVGAPAGEGSGGIFRAVVVGYVVDGGGGRGRVASASSRDIHYLVEVEASSAGGGTRSWACYKRFSDFRALWTGLSRRYPRME 378
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10317.315.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 1.42e-207 / Id = 89.16 Expect = 8.33e-175 / Id = 80.64 Sequence D7G4J5_ECTSI A0A6H5JC90_9PHAE
Match Name E-value Identity Description
D7G4J5_ECTSI 1.420e-207 89.16 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5JC90_9PHAE 8.330e-175 80.64 PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 0 Model size 1167 Hectar predicted targeting category other localisation Exons 6 Cds size 1164
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462522.7588396-CDS-Ecto-sp13_S_contig10317:455..607 1681462522.7588396-CDS-Ecto-sp13_S_contig10317:455..607 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10317 456..607 + 1681462522.7692816-CDS-Ecto-sp13_S_contig10317:834..997 1681462522.7692816-CDS-Ecto-sp13_S_contig10317:834..997 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10317 835..997 + 1681462522.7786953-CDS-Ecto-sp13_S_contig10317:1461..1629 1681462522.7786953-CDS-Ecto-sp13_S_contig10317:1461..1629 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10317 1462..1629 + 1681462522.7878745-CDS-Ecto-sp13_S_contig10317:1905..2016 1681462522.7878745-CDS-Ecto-sp13_S_contig10317:1905..2016 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10317 1906..2016 + 1681462522.7964604-CDS-Ecto-sp13_S_contig10317:2747..3259 1681462522.7964604-CDS-Ecto-sp13_S_contig10317:2747..3259 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10317 2748..3259 + 1681462522.8068902-CDS-Ecto-sp13_S_contig10317:3573..3631 1681462522.8068902-CDS-Ecto-sp13_S_contig10317:3573..3631 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10317 3574..3631 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10317.315.1
>prot_Ecto-sp13_S_contig10317.315.1 ID=prot_Ecto-sp13_S_contig10317.315.1|Name=mRNA_Ecto-sp13_S_contig10317.315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=388bp
RAGTREESASPELVGVTREQRKREGSGASVSSLRSPSTPSGRRASGGPLS back to top mRNA from alignment at Ecto-sp13_S_contig10317:456..3632+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10317.315.1 ID=mRNA_Ecto-sp13_S_contig10317.315.1|Name=mRNA_Ecto-sp13_S_contig10317.315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10317:456..3632+ (Ectocarpus species13 EcNAP12_S_4_19m)AGAGCGGGGACGCGCGAGGAGAGCGCTAGCCCCGAGCTCGTGGGGGTTAC
TAGAGAGCAGAGGAAGCGGGAGGGGAGCGGGGCCAGCGTCAGCAGCTTGC
GCTCGCCCAGCACGCCGTCTGGCCGGAGGGCCAGCGGGGGGCCGCTTTCC
AG GTGTGTGTTGGCTGTGGTGTTTTTTTTTCTGTTTTATGCCTTTGCGTG
GCCATGGGGGGAGGATGGTCGTTTTCTGGGTGATCGCGACCATAGAGACT
TTTGATGGCAGAACAAAGCACAGACGGCCAGAACAGCTTTTGATGTGACC
ACAACACAACAACAACAACAACAACAAGAAGCAATATCACATCAATAGCA
GTGACAACAACAATATCGACGATACTCAGGTTATTGCCCGCGCCGACGGG
CAGCATTGGCTCGGAAGGGGGCGACGTTTCCACAGGCAGCGACAACAAGT
CTGTCAAGGCCGAGGTGTTGGCAGAAGAGCAGCCAGCATCGACGGCGGCG
GCACCATCCGGTGGCTCCGGTAACCTTGCCAAGAAGAAGAAG GTGCCATC
CATGTGTGTTTGCGGTGCGGTAGCGTGTGGTTGTGGGGTGACGTATCCCA
GTAGTTGCAAGCTGGTTGCGCTGTTGCTGTCATGGCCCATGTGCGAAGGT
AGTGTTGTCATTCGCCCGTCCATCCAAAACTATCTTTCTGCGCGTGCATA
CGTAGATTAATCGCTCCCATGTCTCCCTTGCACCGAACTCTCAAAGCGTG
TCTGACCATCCCAGACCGTATGCTACACTACACGTACAATCGTAGATTTA
TCGGTCCCGTATCTCCCTTGCATCCAACACGTACCTTTTTTTTTTGTAAT
TTGTGCACGGCCTACATACATCGTGACCCTGTAAGGGCACACCACCTGCT
TTTTTTTGTTGTTATTGTTTACGTCTGGTTGTGATACATCCCCTACTCTC
GTCGACGGCTGTGCATGTCCCTCGCGGTTGCAACAAAACAACAATGACAA
CTGCAGACGTTCATGGAAAAGTTCGGCGACATGCTCGAGGCTGCCGCGGA
GACCGCCATACCCGCCGCCCCTGGCGGCGGGGGAGTAGGGTACGGCAGCC
GCGCTGCTACCGCCAGGCCCCGTGAGTGGGAGCAGTGGGACGCCGCTCCG
CTTCTAGAGTTCATGAAGGAAGAG GTACGATGCCAGCAGTAGGAGTCGCC
ACCACTAGCGGTAGCGTTGGGGGTTAGAGAACCGGGGTGGAAGTTAAGAA
GTTGAGGTTACAGACGCAGGTGAGTTAAAGAGGTTGACTCTCGTTTGCTG
CTCTTGCTACCCCTGTTGCTGTTGCTGCCGTTGCTGCTCTTGTTGGTGAG
GTTGCTGGCAGCGTGGGTGATGTCCATGTTGTTGGTGCTCATGGTGAGGT
TGACGATTGCTGTTCTTCTCTCGTTGTCGTTGTTGCCATTATCGTCGCAG
GCTCGAACGGCGGCGGACAAGGCTCGCAAGGAGGAAATCGCTCGCACCGG
TGGAGACAAGGACAAGCTTGTAGCCTTGGTCAAGGCGTGGTACACGCCCT
TCCTGTCTCAG GTACTGCTGCTGCTGCTGCTGCTGCTGTTTGGTTGACTG
AAACCCGCCATCGACTTGATGTTGTAGGAGTACAATACCTCAGTACCTGC
TACTGGTTCGTTGGAGCACAGGAAGGGAACTTCTGTAGTTGTCGACTGAG
AATGTTTTTCGCTTTTCAGATGCTTTTCTTCCCATCACCTCAGCCATGGG
GTAATCCTTCATGTTCTTTTGTTCAAGATGAGTTGGGTAACTTCTCTTTG
GTTGTTGCAAGGAAACGCTCTGTGGTGTTTTCGTCAAGACTTATACAACA
TCATACACGGTTGTTTTGTTCGGGAAAATGCCGTGACGGTGTTTCGTGCT
CCTTGTGCTGTGGTACCAATGCTGGTCGACCTTGTTGTTCGACGATGGAG
AAGAGTCAACTTGACTAGAAGTGCTGGTTTTGTTTCAATCCTCTGGTTTT
TATAGGGAGATGCTCGACATTTCTGATAAGAGTTGACCCCGCCACAGTAA
AAGGTCACGTCTCAAAACCCGCGATAGTTATGGCTGCTATTATTGAACGC
CGCGGTAGTTGCAAGGCCGTAGATAGCTCTACCCTTTTATTTTTGTGCGA
GTTGTACTGCCCTGTGCTGTCCGGCCGTTGTTTTTTTTTCGGCTTTTGTG
ACCTCCCGAAGTCGTTTCTTTCTTTTCTCTCGAGTCATTCCCGTCTAAGC
AGTACAACCCCGCCCCGCCCTGTGCGTTACGACACGAAACAGGCGGAGTT
TGTCCGGCAAAAGGAAGCCCTGACCACCCAGCACGTGGGGATGGTGGACG
ATTCGGGTCGGTGCGTATCGGCGAAATCATCGTCGGTAGCGTCCCCCGTC
AGAGGAAGGAGAGGGGGGGAAGGCGGACCACCTTCCGCGGCCATCGGCTC
CGCCGACATTTCCCCAGGGCTCTTTCTCTCGAGGCGCTCCCGTGCCAAGA
ACGCCTCTCCAACAAGCACGAAACCCGGGGACCCTTTGCGGCTGTCCCGT
GCCCCCGAGGAGAGCGGGCTTGAGCTCGGCGGAGGCGATTTGGACACCGC
CTCTGCTAGGAGTGCCGCCGCCGGGGCACCGGCGGGGGAGGGGAGCGGGG
GTATTTCCCGCGCGGTCGTGGTCGGGTACGTGGTCGATGGAGGAGGGGGC
TGGGGGAAGGTTGGTTCTGCCTCTTGTCGGGACATTCACTACCTGGTGGA
GGTGGAGGCCTCTTCGGCCGAGGGAGGGACCCGCTCTTGGGCGTGCTACA
AGCG GTAAGTGGTATGGGGGGGGGGGTAGGGACTTGTAGGATGTTTGGCC
ATTTTAATGTGATCGACGGTGGGCAAGGAGGGACGTTGTGCGAGCGTGTG
GCTGCGTCCTGTTGTCTCGTGTCGCGGCTAAAGGGCTTTTGCCACCATTC
TCAGCAGCGATATCGACAAAATCGACAACCGCTGTCGTCGTTCTGCGAAC
ACCCCCCCCCGCTGCTGCCACCGCCTTCCTGTGTTTGTAGCAACGCTAAT
GTGTTAGTACCGTTTCACTTTTCTGCTGCCGTGTCCCCTCCCCTTGTGCT
GGACCATGATCACTTAAGTTTCTCCGACTTTCGAGCCTTGTGGACTGGGA
TGTCGCGACGGTATCCCCGCATGGAG back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10317:456..3632+
>mRNA_Ecto-sp13_S_contig10317.315.1 ID=mRNA_Ecto-sp13_S_contig10317.315.1|Name=mRNA_Ecto-sp13_S_contig10317.315.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1164bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10317:456..3632+ (Ectocarpus species13 EcNAP12_S_4_19m) back to top