prot_Ecto-sp13_S_contig1403.3144.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1403.3144.1
Unique Nameprot_Ecto-sp13_S_contig1403.3144.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length631
Homology
BLAST of mRNA_Ecto-sp13_S_contig1403.3144.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI)

HSP 1 Score: 1103 bits (2853), Expect = 0.000e+0
Identity = 536/555 (96.58%), Postives = 542/555 (97.66%), Query Frame = 0
Query:   76 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVENPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCSRVNNRTDASRHSARHLWYWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIGCGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAAKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYYFYPLFDFVITRGVIGGVCKLGFIVYSEVCSILGLWNALQPPFSRDDCLEALAEYSDLRCRTLFPARGMEDGRRVDAILDPEPRAWEALLDSSPLLEPIPAVAAPGPLGRATEGDSSDASIYTSVAKAADVDSARLKLVLLRDALQAPSPLEPNYDMALREEAKERSLSDRWGGWKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVLSVKCFVSRIIGDTQVGSGDTNQSSCNGVRSLDLVMIDVSLHTEELGICTADGSLGLSASEHVSRFFDNPAAHCVGYGRLGSERLSGGSL 630
            MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVENPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGC+ VNNRTDASRHSARHLWYWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIG GFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSA KTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPY FYPLFDF+ITRGVIGGVCKLGFIVYSEVCS+LGLWNALQPPFSRD CLEALAEYSDLRCRTLFPARGMED RRVDAILDPEPRAWEALLDSSPLLEPIPAVAAPGPLGRATEGDSSDASIYTSVAKA DVDSARLKLVLLRDALQAPSPLEP+Y+MALREEAKERSL DRWGGWKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELV SVKCFVSRIIG+TQVG GDTNQSSCNGVRSLDLVMIDVSLHTEELGICTADGSLGLSASE VSRFFDNPAAHC GYGRL SERLSGGSL
Sbjct:    1 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVENPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCAGVNNRTDASRHSARHLWYWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYRFYPLFDFIITRGVIGGVCKLGFIVYSEVCSLLGLWNALQPPFSRDHCLEALAEYSDLRCRTLFPARGMEDERRVDAILDPEPRAWEALLDSSPLLEPIPAVAAPGPLGRATEGDSSDASIYTSVAKAEDVDSARLKLVLLRDALQAPSPLEPHYEMALREEAKERSLLDRWGGWKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVQSVKCFVSRIIGETQVGGGDTNQSSCNGVRSLDLVMIDVSLHTEELGICTADGSLGLSASEQVSRFFDNPAAHCAGYGRLDSERLSGGSL 555          
BLAST of mRNA_Ecto-sp13_S_contig1403.3144.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 2.640e-71
Identity = 207/666 (31.08%), Postives = 287/666 (43.09%), Query Frame = 0
Query:   72 CRVAMCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVENPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCSRV----------------------------------NNRTDASR-HSARHLWYWEQR--YSPEASRSLYWQLYKSLAAYRMAL-REEKRIGCGFT----------YDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAAKTFYACD---GRSWPPPSSWWQPECATIG-----------------------------------------------------FEESVLFRHLHASEIPYYFYPLFDFVIT-------------RGVIGGVCKLGFIVYSEVCSILGLWNALQPPFSRDDCLEALAEYSDLRCRTLFPARGMEDGRRVDA---ILDPEPRAWEALLDSSPLLEPIPAVAAPGPLGRATEGDSSDASIYTSVAKAADVDSAR--LKLVLLRDAL-----QAPSPLEPNYDMALRE-----EAKERSLSDRWGG--------------WKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVLSVKCFVSRIIGDTQVGSGDTNQ-----SSCNGVRSLDLVMIDVSLHTEEL 586
            C VA+  SG +RSFV P +HRS R +++E+IKA+GC VDVF Y +  D  +  +Q  + E   N   +E  +  L PT+L+WHQ+QAGIIPN C                                     +NR++  R H+++       R  +S  + R  YWQLY+SLAAYR+A+ RE+++     T          YDW++  R DVAW + LP  R+FSR  VWF    WPMS +FALVPR FSDRFFSA + F+ACD   G SWPP  +WWQP+C   G                                                     F ES+++RHLHAS +PY  YP+F++                 G     C+     Y   C +LG        ++ ++C  AL+E+S L CRT         G + +     LDP+   W           P  +V   G     TE D+ D        +  + D  R    L  LRDA+          +      A  E     E   R+L    GG               +T+  W +HS  GC L E  +PG +PH++ + +     +REL L+ KC   R I      S          + C   RSL+LVMIDVSLH+ E+
Sbjct:   39 CAVAVSISGDVRSFVDPVLHRSFRRHVVEAIKAEGCTVDVFVYASLGDEDLLVEQ--DAETIRN---IEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEAQPSSFAESSVPNARPTGGNVGGDNRSNQPRGHASKEPSKPPSREQFSTRSER-FYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKKSLPSFRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEHGQENGNSSGNVHSGGNLHHSPRSGPAGGGGGFELRGSDDGSIFHDNRGGGRGEGFGESIVYRHLHASGVPYRPYPMFEYYTVPPYVRDGDADGDAAGDTRSGCETSTPDYFTGCVLLGTVGLFSQAYTSEECATALSEWSSLHCRTSTHLEATGPGHQTERGSENLDPDLTTW-----------PRSSV---GVYPDETETDNGDVLGAAEADRVQEEDLRRAWFNLAALRDAVIVAADDGSEEVMHGSSNAGEEDTPSGETSRRNLGKEDGGDHDAAPKPSGSSPTRQTNRSWSVHSQGGCRLNE--YPGRAPHIIRHSSTDSHRMRELALATKCLAHRFIEGATAWSSVNEDFGFDATVCASSRSLELVMIDVSLHSAEV 682          
BLAST of mRNA_Ecto-sp13_S_contig1403.3144.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 1.420e-68
Identity = 193/624 (30.93%), Postives = 272/624 (43.59%), Query Frame = 0
Query:   72 CRVAMCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVENPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCSRV----------------------------------NNRTDASR-HSARHLWY--WEQRYSPEASRSLYWQLYKSLAAYRMAL-REEKRIGCGFT----------YDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAAKTFYACD---GRSWPPPSSWWQPECATIG-----------------------------------------------------FEESVLFRHLHASEIPYYFYPLFDF------VITRGVIGGV-------CKLGFIVYSEVCSILGLWNALQPPFSRDDCLEALAEYSDLRCRTLFPARGMEDGRRVDAI---LDPEPRAWEALLDSSPLLEPIPAVAAPGPLGRATEGDSSDASIYTSVAKAADVDSARLKLVLLRDA--LQAPSPLEP---------NYDMALREEAKERSLSDRWGGW-------------KTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVLSVKCFVSRII 551
            C VA+  SG +RSFV P VH S + +++E+IKA+GC VDVF Y +  D  +  +Q  + E   N   +E  +  L PT+L+WHQ+QAGIIPN C                                     +NR++  R H ++        +++S  + R  YWQLY+SLAAYR+A+ RE+++     T          YDW++  R DVAW   +P LR+FSR  VWF    WPMS +FALVPR FSDRFFSA + F+ACD   G SWPP  +WWQP+C   G                                                     F ES+++RHLHAS +PY  YP+F++      V    V GG        C+     Y   C +LG      P ++ + C  AL+E+S L CR          GR+ +     L+P  +AW           P  +V       +   GD    +    V +  D+  A   LV LRDA  L A    E            D  +RE ++     D  G               +T+  W +HS  GC L E  +PG +PH++ + +     +REL L+ KC   R +
Sbjct:   38 CAVAVSISGDVRSFVDPVVHLSFQRHVVEAIKAEGCTVDVFVYASLGDEDLLEEQ--DAETIRN---IEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRGHVSKEPSKPPGREQFSTRSER-FYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEDGQENENGSGSVHSGGNLHHSPRGGPAGGGGDFDLRDWDDGSIFHDNRGGSRGEGFGESIVYRHLHASGVPYRPYPMFEYYAVPPYVRDGDVDGGAARDTRSGCEASTSDYLTGCVLLGTVGLFSPAYTSEACATALSEWSSLHCRASTQPEATSTGRQTERASKNLNPYLKAW-----------PRSSVGVSSGEAKTHRGDVFGTAEEDRVQEE-DLKRAWSNLVALRDAVILAADDDSEEATHGSSNAGEDDTPIREASRRHLGKDDGGDHDAAPKPSNSSPTRQTNRSWSVHSQWGCRLNE--YPGRAPHIIRHSSTDSHRMRELALATKCLAHRFM 641          
BLAST of mRNA_Ecto-sp13_S_contig1403.3144.1 vs. uniprot
Match: D8LCA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA5_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 1.910e-36
Identity = 109/342 (31.87%), Postives = 153/342 (44.74%), Query Frame = 0
Query:   59 PEVHTDPDGTGVSCRVAMCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTVVKAKQVENPE-------FTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCSRVNNRTDASRHSARHLWYWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIGCGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAAKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYYFYPLFDFVITRGVIGGVCKLGFIVYSEVCSILGLWNALQPPFSR------DDCLEALAEYSDLRCRTLFP 387
            P    D      SCR A+ +SG +RSFV P VH S + NLIE ++ D C VDVF +++ ED V +  +  + E        TP  ++VE A+ +L P  + +HQ+QAG IPNGC                              + YWQLYK  A +RM   EE     G +Y WVIR RLD+AW  P+PPL  F    V+ G +++P+SD F L PR F+   F A    Y C        S   +      G     L R      +P+ +Y  F   I R   GGVC++    +   C +L     + P  +         CL+ +  +    C  +FP
Sbjct:   24 PAFGADAASGTESCRCAVLYSGHVRSFVQPRVHLSHKKNLIEQLEID-CHVDVFMHISVEDEVPRRYRKGDFEDALAFTPHTPQETEVEHAVGLLNPLSIEYHQEQAGYIPNGCETG------------------------CEINAYWQLYKMKAVFRMM--EEHEATTGLSYTWVIRSRLDIAWMLPVPPLSRFPPTRVYAGHNFFPLSDQFLLSPRMFAQSIFGAVSLCYDCKALEAHRES---KVPAQVEGLLRVALRRGHGHGAVPFGYYE-FPVAIVRSNEGGVCEV-LHPHKLACEMLRASGLMGPLTAATGGGQPSSCLDMMNRWHRHACVEMFP 333          
BLAST of mRNA_Ecto-sp13_S_contig1403.3144.1 vs. uniprot
Match: A0A813GBV9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GBV9_POLGL)

HSP 1 Score: 60.5 bits (145), Expect = 5.920e-6
Identity = 68/231 (29.44%), Postives = 104/231 (45.02%), Query Frame = 0
Query:   59 PEVHTDPDGTGVSCRVAMCFSGAIRSFVHPAVHRSIRTNLIESIKADG----CEVDVFAYVTREDTVVKAKQVENPEFTPNSSDVEVALA--VLEPTRL--LWHQDQAGIIPNGCSRVNNRTDASRHSARHLWYWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIGCGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAAKT 281
            P+V   P   G +   A CF G  RS + P VH S+R NLI++  A      C   + A V    T V+       ++T  SS VE+A A  VL+P R+  L H++Q   +P          D        L  W+Q            Q+ K+ A ++M   EE R+GC ++Y +++R   D+ W R  P   +F  +A W G     + D F ++ RK ++ +F    T
Sbjct:  102 PQVELLPSCPGPAA--AFCFFGQPRSLMLPIVHVSVRRNLIDAFGAPHSDTFCLFKLAAPVENNGTAVR-------KYTA-SSKVELAAAEEVLQPLRIRYLTHEEQK--LPE--------FDPPGKGMCELRIWQQ------------QVAKA-ACFKMIQEEEGRLGCRYSYVFLVRP--DLLWVRRFPKFTNFENEA-WEGATI--VRDLFQMLTRKTAEAYFKVPLT 294          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1403.3144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FK46_ECTSI0.000e+096.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5E2_ECTSI2.640e-7131.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVJ6_9PHAE1.420e-6830.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCA5_ECTSI1.910e-3631.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A813GBV9_POLGL5.920e-629.44Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..630
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..39
score: 0.463

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1403contigEcto-sp13_S_contig1403:11492..16932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1403.3144.1mRNA_Ecto-sp13_S_contig1403.3144.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1403 11492..16932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1403.3144.1 ID=prot_Ecto-sp13_S_contig1403.3144.1|Name=mRNA_Ecto-sp13_S_contig1403.3144.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=631bp
MLRWDGKPRSRGKAPTRGGFVATLAYVLGAAGLSSAARAEGTTAINHSDN
GRSSRQQNPEVHTDPDGTGVSCRVAMCFSGAIRSFVHPAVHRSIRTNLIE
SIKADGCEVDVFAYVTREDTVVKAKQVENPEFTPNSSDVEVALAVLEPTR
LLWHQDQAGIIPNGCSRVNNRTDASRHSARHLWYWEQRYSPEASRSLYWQ
LYKSLAAYRMALREEKRIGCGFTYDWVIRGRLDVAWARPLPPLRSFSRQA
VWFGRHYWPMSDHFALVPRKFSDRFFSAAKTFYACDGRSWPPPSSWWQPE
CATIGFEESVLFRHLHASEIPYYFYPLFDFVITRGVIGGVCKLGFIVYSE
VCSILGLWNALQPPFSRDDCLEALAEYSDLRCRTLFPARGMEDGRRVDAI
LDPEPRAWEALLDSSPLLEPIPAVAAPGPLGRATEGDSSDASIYTSVAKA
ADVDSARLKLVLLRDALQAPSPLEPNYDMALREEAKERSLSDRWGGWKTH
PLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVLSVKCFVSRI
IGDTQVGSGDTNQSSCNGVRSLDLVMIDVSLHTEELGICTADGSLGLSAS
EHVSRFFDNPAAHCVGYGRLGSERLSGGSL*
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