prot_Ecto-sp13_S_contig1402.3138.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1402.3138.1
Unique Nameprot_Ecto-sp13_S_contig1402.3138.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
BLAST of mRNA_Ecto-sp13_S_contig1402.3138.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 5.070e-29
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 0
Query:    1 MSVRSVNDPVMTISDSTAVSFTDDGSYSVASGTCIIQTDDPTTVTIDPDEDELILEGTCYVKV 63
            M VRSVNDPVMTISDSTAVSFT+DGSYSVASGTCIIQTDDP+TVTIDPDEDELILEGTCYVKV
Sbjct:  897 MWVRSVNDPVMTISDSTAVSFTNDGSYSVASGTCIIQTDDPSTVTIDPDEDELILEGTCYVKV 959          
BLAST of mRNA_Ecto-sp13_S_contig1402.3138.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 5.410e-22
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0
Query:    1 MSVRSVNDPVMTISDSTAVSFTDDGSYSVASGTCIIQTDDPTTVTIDPDEDELILEGTCYVKV 63
            M V+SVNDPVMTI+DST VSFT+ G  +V SGTC IQTDDP+TVTID DEDEL+LEGTCYVKV
Sbjct: 1100 MKVQSVNDPVMTITDSTTVSFTNGGYSNVPSGTCTIQTDDPSTVTIDADEDELVLEGTCYVKV 1162          
BLAST of mRNA_Ecto-sp13_S_contig1402.3138.1 vs. uniprot
Match: D7FUI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI8_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 7.600e-21
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0
Query:    3 VRSVNDPVMTISDSTAVSFTDDGSYSVASGTCIIQTDDPTTVTIDPDEDELILEGTCYVKV 63
            V+SVNDPVMTI+DST VSFT+ G  +V SGTC IQ DDP+TVTID DEDEL+LEGTCYVKV
Sbjct:  435 VQSVNDPVMTITDSTTVSFTNGGYSNVPSGTCTIQADDPSTVTIDADEDELVLEGTCYVKV 495          
BLAST of mRNA_Ecto-sp13_S_contig1402.3138.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.810e-14
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    3 VRSVNDPVMTISDSTAVSFTDDGSYSVASGTCIIQTDDPTTVTIDPDEDELILEGTCYVKV 63
            V+S NDP+M +SDS+ VSF + G   V +  C+IQ DDP+TVTID DEDEL L+G+CYVKV
Sbjct: 1094 VQSSNDPIMMVSDSSTVSFNNLGLSLVEADACVIQADDPSTVTIDADEDELTLDGSCYVKV 1154          
BLAST of mRNA_Ecto-sp13_S_contig1402.3138.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.060e-11
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 MSVRSVNDPVMTISDSTAVSFTDDGSYSVASGTCIIQTDDPTTVTIDPDEDELILEGTCYVKV 63
            M V+SVNDPVMT+S S+ VSF + G  +V SGTC+IQTD  + VT   D+ EL L+GTCYVKV
Sbjct: 1088 MKVQSVNDPVMTVSGSSGVSFDNCGFSNVESGTCVIQTDATSEVTTG-DDPELSLDGTCYVKV 1149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1402.3138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FZZ4_ECTSI5.070e-2995.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFA6_9PHAE5.410e-2277.78F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FUI8_ECTSI7.600e-2177.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL74_9PHAE2.810e-1460.66F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
D7FTH1_ECTSI1.060e-1160.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1402contigEcto-sp13_S_contig1402:7552..8414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1402.3138.1mRNA_Ecto-sp13_S_contig1402.3138.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1402 512..8414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1402.3138.1 ID=prot_Ecto-sp13_S_contig1402.3138.1|Name=mRNA_Ecto-sp13_S_contig1402.3138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
MSVRSVNDPVMTISDSTAVSFTDDGSYSVASGTCIIQTDDPTTVTIDPDE
DELILEGTCYVKV*
back to top