prot_Ecto-sp13_S_contig14016.3136.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14016.3136.1
Unique Nameprot_Ecto-sp13_S_contig14016.3136.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14016.3136.1 vs. uniprot
Match: A0A6H5JF41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF41_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 6.540e-37
Identity = 76/87 (87.36%), Postives = 78/87 (89.66%), Query Frame = 0 
Query:    1 MTPSAALPAACAVDDKGGTANTSTASFLSTGQASHGGEAGGDPGYDRRKGSASRRKTLVNATSTTEASSEKFDSNGTSAVKPPDLGG 87
            MTPSAALPA CA+DD GGTANTSTASFLSTGQASHG E G DPGYDRRKGSA RRKTL NATST EAS+EKFDSNGTSAVKPP LGG
Sbjct:  258 MTPSAALPATCAIDDNGGTANTSTASFLSTGQASHGREVGDDPGYDRRKGSAGRRKTLGNATSTMEASAEKFDSNGTSAVKPPGLGG 344
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BLAST of mRNA_Ecto-sp13_S_contig14016.3136.1 vs. uniprot
Match: D7FKN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN6_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.160e-22
Identity = 61/84 (72.62%), Postives = 65/84 (77.38%), Query Frame = 0 
Query:    6 ALPAACA--VDDKGGTANTSTASFLSTGQASHGGEAGGDPGYDRRKGSASRRKTLVNATSTTEASSEKFDSNGTSAVKPPDLGG 87
            A+ AACA  +     TAN STASFLSTGQAS GG  G DPGYD RKGSA  RKTL NATSTTEAS+EK DSNGTSA+KP DLGG
Sbjct:  249 AVAAACAARMTPSDNTANASTASFLSTGQASDGGGVGDDPGYDGRKGSAGGRKTLGNATSTTEASAEKVDSNGTSAMKPLDLGG 332
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14016.3136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JF41_9PHAE6.540e-3787.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKN6_ECTSI1.160e-2272.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14016contigEcto-sp13_S_contig14016:4232..4492 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14016.3136.1mRNA_Ecto-sp13_S_contig14016.3136.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14016 2907..4492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14016.3136.1 ID=prot_Ecto-sp13_S_contig14016.3136.1|Name=mRNA_Ecto-sp13_S_contig14016.3136.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
MTPSAALPAACAVDDKGGTANTSTASFLSTGQASHGGEAGGDPGYDRRKG
SASRRKTLVNATSTTEASSEKFDSNGTSAVKPPDLGG
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