mRNA_Ecto-sp13_S_contig14004.3129.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Match: D8LSS8_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSS8_ECTSI) HSP 1 Score: 276 bits (707), Expect = 9.510e-85 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1
Query: 1 KAVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTVG 429
KAVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTVG
Sbjct: 138 KAVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTVG 280
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Match: A0A6H5L7H7_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7H7_9PHAE) HSP 1 Score: 206 bits (525), Expect = 1.250e-66 Identity = 103/109 (94.50%), Postives = 107/109 (98.17%), Query Frame = 1
Query: 103 EKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTVG 429
++VTRGTLQTVLRH AFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGD+VVRMKGETITTFLPWESALDDGVGGEV+V VQRGGKEVIARLTVG
Sbjct: 9 KQVTRGTLQTVLRHIAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDIVVRMKGETITTFLPWESALDDGVGGEVQVHVQRGGKEVIARLTVG 117
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Match: A0A3R7XTM1_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7XTM1_9STRA) HSP 1 Score: 157 bits (396), Expect = 7.610e-42 Identity = 77/141 (54.61%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 4 AVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTV 426
A+ALN G ++ TAA+FYLPL ++ RAL+L++ G+ V RGT+QTV + FDE RRLG+ P TEAL+R FP ETG+L V E +P GP+ L+PGDV+VR+ GE IT F+P E+ LDD VG EVE+QV+R G+ V ++ V
Sbjct: 293 AIALNAGGKIGTAASFYLPLDRVKRALDLVREGKDVPRGTIQTVFNYKPFDEVRRLGVDPATEALVRSSFPLETGMLTVAETIPVGPSSNKLQPGDVLVRVNGELITRFVPLEAILDDNVGKEVELQVERSGELVTCQVQV 433
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Match: A0A8K1CD89_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD89_PYTOL) HSP 1 Score: 155 bits (392), Expect = 4.250e-41 Identity = 77/142 (54.23%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 1 KAVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTV 426
+A+ALN G ++ T+A+FYLPL ++ RALELIQ+G+ V RGT+QTV ++ FDE RRLG+ +TE+L+R FP ETG+L V E +P GP+ LEPGDV+VR+ GE IT F+P ES LDD VG VE++V+R GK + + V
Sbjct: 335 EAIALNAGGKIGTSASFYLPLDRVKRALELIQQGKDVPRGTIQTVFQYKPFDEVRRLGVSSETESLVRSTFPLETGMLTVSETIPDGPSHEKLEPGDVLVRLNGELITRFVPVESILDDSVGKTVELEVERSGKLIKTSIEV 476
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Match: A0A7C7ZHV1_9DELT (Pro-apoptotic serine protease NMA111 n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7ZHV1_9DELT) HSP 1 Score: 155 bits (391), Expect = 5.550e-41 Identity = 76/140 (54.29%), Postives = 104/140 (74.29%), Query Frame = 1
Query: 7 VALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTV 426
+ALN G A++FYLPL + VRAL+LIQ+GE V RGTLQT L + +DE RRLGL+ +TEA +R+ FPE TG++VV + VP+GPADG LEPGD+VVR+ GE +T+F+P E+ LDD VG V ++++RGG+ + V
Sbjct: 198 IALNAGGSRSAASSFYLPLDRAVRALKLIQKGEPVPRGTLQTTLNYLPYDEVRRLGLQSETEAEVRRRFPEGTGMIVVRDNVPEGPADGKLEPGDIVVRLNGEHVTSFIPIEAVLDDSVGEIVTLEIERGGEPMTLEFVV 337
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Match: UPI001989E537 (PDZ domain-containing protein n=1 Tax=Steroidobacteraceae bacterium TaxID=2689616 RepID=UPI001989E537) HSP 1 Score: 153 bits (386), Expect = 1.950e-40 Identity = 75/143 (52.45%), Postives = 102/143 (71.33%), Query Frame = 1
Query: 1 KAVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTVG 429
+ VALN G A++FYLPL ++ RALELIQ G+ V+RG LQ V ++T +DE RRLGL TE RK FP TG+LVV EV+P GPADG L+PGDV+VR+ G ++ F P E LD+ VGG +E++++RGGK + A++ +G
Sbjct: 32 RVVALNAGGATGAASSFYLPLGRVKRALELIQAGKTVSRGALQVVFKYTPYDELRRLGLAEKTEESARKAFPALTGMLVVNEVLPGGPADGTLQPGDVLVRVNGRLVSEFEPLEQVLDNDVGGSIELELERGGKPLAAKINIG 174
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Match: A0A0M0JEQ7_9EUKA (Pro-apoptotic serine protease nma111-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEQ7_9EUKA) HSP 1 Score: 152 bits (385), Expect = 3.260e-40 Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 4 AVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTV 426
A+ALN G +V T+A F+LPL + VRAL L+Q GE VTRGTLQ V H FDEARRLGL EA R + P+E G+LV EV+PKGPADGVLEPGD+++R+ G T+F+ E+ALD VGG V ++V RGG+ + L V
Sbjct: 236 AIALNAGGKVGTSAGFFLPLDRAVRALRLLQAGEPVTRGTLQAVCLHQPFDEARRLGLPAAEEAAFRAQLPDELGLLVFSEVLPKGPADGVLEPGDILLRVAGRWCTSFIALEAALDAAVGGHVALEVCRGGQRISHSLRV 376
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Match: A0A2D4CAL2_PYTIN (Pro-apoptotic serine protease NMA111 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAL2_PYTIN) HSP 1 Score: 152 bits (383), Expect = 6.900e-40 Identity = 77/142 (54.23%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 1 KAVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTV 426
+A+ALN G ++ T+A+FYLPL ++ RALEL+Q+G++VTRGT+QTV + FDE RRLG+ +TE+L+R +P ETG+L V E +P GP+ LEPGDV+VR+ GE IT F+P E+ LDD VG V VQV+R GK V + V
Sbjct: 284 EAIALNAGGKIGTSASFYLPLDRVKRALELLQQGKEVTRGTIQTVFLYKPFDEVRRLGVTAETESLVRSLYPLETGMLTVSETIPGGPSHQKLEPGDVLVRVNGELITRFVPLEAILDDHVGESVVVQVERSGKLVETTVDV 425
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Match: H3GNS5_PHYRM (PDZ domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNS5_PHYRM) HSP 1 Score: 150 bits (380), Expect = 1.800e-39 Identity = 71/141 (50.35%), Postives = 103/141 (73.05%), Query Frame = 1
Query: 4 AVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTV 426
A+ALN G ++ T+A+FYLPL ++ RA +L++ G+ V RGT+QT+ + FDE RRLG+ P TE L+R FP ETG+L V E +P GP++ L+PGDV+VR+ GE IT F+P E+ LDD VG E+E+Q++R G+ V ++ V
Sbjct: 285 AIALNAGGKIGTSASFYLPLDRVKRAFDLVREGKDVPRGTIQTIFNYKPFDEVRRLGVDPATERLVRSTFPLETGMLTVAETIPGGPSNKKLQPGDVLVRVNGELITRFVPLEAILDDNVGDEIELQIERSGELVTHKMQV 425
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Match: K3X1C9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1C9_GLOUD) HSP 1 Score: 150 bits (378), Expect = 3.210e-39 Identity = 75/142 (52.82%), Postives = 103/142 (72.54%), Query Frame = 1
Query: 4 AVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAFDEARRLGLKPDTEALLRKEFPEETGVLVVGEVVPKGPADGVLEPGDVVVRMKGETITTFLPWESALDDGVGGEVEVQVQRGGKEVIARLTVG 429
A+ALN G + A++FYLPL ++VRAL+L+Q+G VTRGTLQT+ +HTAFDE RRLGL+ +TEA+LR +FP ETG+LVV +V+ GPAD L+ GD++++ G+ TTFL E LD V VE++ QRGG + + VG
Sbjct: 227 AIALNAGGAKKAASSFYLPLDRVVRALKLVQQGLDVTRGTLQTIFKHTAFDEVRRLGLQAETEAVLRAQFPAETGMLVVDQVIQHGPADQKLQTGDILIKFAGQYETTFLNIEEFLDSHVEQNVEIEFQRGGMTHVVEVEVG 368 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14004.3129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14004.3129.1 >prot_Ecto-sp13_S_contig14004.3129.1 ID=prot_Ecto-sp13_S_contig14004.3129.1|Name=mRNA_Ecto-sp13_S_contig14004.3129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=144bp KAVALNCGARVETAAAFYLPLTKIVRALELIQRGEKVTRGTLQTVLRHTAback to top mRNA from alignment at Ecto-sp13_S_contig14004:2915..4163+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14004.3129.1 ID=mRNA_Ecto-sp13_S_contig14004.3129.1|Name=mRNA_Ecto-sp13_S_contig14004.3129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1249bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14004:2915..4163+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14004:2915..4163+ >mRNA_Ecto-sp13_S_contig14004.3129.1 ID=mRNA_Ecto-sp13_S_contig14004.3129.1|Name=mRNA_Ecto-sp13_S_contig14004.3129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=432bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14004:2915..4163+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |