mRNA_Ecto-sp13_S_contig14.3122.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Match: D7FLE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLE7_ECTSI) HSP 1 Score: 1228 bits (3178), Expect = 0.000e+0 Identity = 733/935 (78.40%), Postives = 738/935 (78.93%), Query Frame = 3
Query: 456 MTKRANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIDKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLLLRRSSGVTPSETVGDGAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGRSPAGINPAISYRQQRRWSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSREEQTQFLPKEPRPIRFRLCRPGSASVQVIPPLKSLERVYACRGCGAFLLTGGHIIKPNIDLPSLQAVLARSSPRNQADQYAPDAGASPISLVTSNSSATIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDTVVTRGRGDRRSPSPLSERRGQSRVAVTTTTRVSVSSGSPTTRRSAAARRPAPPLRVITTELGVDRPPMHNRWVPEGFLAGVQAATAGAGPPLQGATVTVGGXXXXXXXXTAVAEAIRLQSPLGFTPSPSRLRPWAAGRCSSGAAXXXXXXXXXXCAGDSRCGDGQRNSSVFAFESEDDSSNVDPFEREGEGMLAEAYPVAVDAIYTASGSGGSGVISVGXXXXXMSYSGWEGAVXXXXXSAGCRRLRRATGTPTNATLLSGEFNLMLSSKVPLSAGSGMESVSPIMTPRSPRTPASCGSTSPCASDGSFSNSLSRPQSAEKRQFLMRMNQMESRTLATTGPPSFPDTESQNERPTSRPGGRWLHVDLLDWMGDIMVAPTGHICCPSSGCGVELGNWSWEKPEAAGLKSPTGPPLIRLDKALIKTTSYMRSQLDSSRSSLSRDNTPKGSPCASANSPSKGSPGSALPESDLRRSSGILESRLAGLSASPQLTQPARGSPG 3260
MTKRANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQD+GITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGI+KGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLLLRRSSGVTPSETVGDGA G XXXX GRGRSPAGINP PNIDLPSLQAVLARSSPRNQADQYAPDAGASP+SLVTSNS+ATI XXXXXXXXXXXXXXXXXXXXXXXXXGTDTVVTRGRGDRRSPSPLSERRGQSRVAV T LRVITTELG DRPPMHNRWVPEGFLAGVQA TAGAGPPLQGATVTVG XXXXXXXXTAVAEAIRLQSPLGFTPSPSRLRPWAAGRCSSG A XXXXXX CAGDSRCGDGQRNS VFAFESEDDSSNVDPFEREGEG LAEAYPVAVDAIYTASGSGGSGVISVG X MSY GWEGAV SAGCRRLRRATGTPTNATL SGEFNLMLSSKVPLSAGSGMESVSP+MTPRSPRTPASCGSTSPCASDGSFSNSLSRPQSAEKRQFLMRMNQMESRTLATTGPPSFPDTESQNERPTSRPGGRWLHVDLLDWMGDIMVAPTGHICCPSSGCGVELGNWSWEKPEAAGLKSPTGPPLIRLDKALIK TSYMRSQLDSSRSSLSRDNTPK SPCASANSPSKGSPGSALPESDLRRSSGILESRLAGLSASPQLTQPARGSPG
Sbjct: 1 MTKRANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDRGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIEKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLLLRRSSGVTPSETVGDGAAGGEAAEHTRTSPTRPSAQHQLGATGAAXXXXSVSTAGIPPTPRSPRGRGRSPAGINP------------------------------------------------------------------------------------------------------PNIDLPSLQAVLARSSPRNQADQYAPDAGASPLSLVTSNSTATITSSMXXXXXXXXXXXXXXXXXXXXXXXXXGTDTVVTRGRGDRRSPSPLSERRGQSRVAVATXXXXXXXXXXXXXXXXXXXXXXXXXLRVITTELGPDRPPMHNRWVPEGFLAGVQATTAGAGPPLQGATVTVGXXXXXXXXXTAVAEAIRLQSPLGFTPSPSRLRPWAAGRCSSGTATGXXXXXX--CAGDSRCGDGQRNSPVFAFESEDDSSNVDPFEREGEGTLAEAYPVAVDAIYTASGSGGSGVISVGSGXGGMSYPGWEGAVGSGGGSAGCRRLRRATGTPTNATLQSGEFNLMLSSKVPLSAGSGMESVSPLMTPRSPRTPASCGSTSPCASDGSFSNSLSRPQSAEKRQFLMRMNQMESRTLATTGPPSFPDTESQNERPTSRPGGRWLHVDLLDWMGDIMVAPTGHICCPSSGCGVELGNWSWEKPEAAGLKSPTGPPLIRLDKALIKNTSYMRSQLDSSRSSLSRDNTPKSSPCASANSPSKGSPGSALPESDLRRSSGILESRLAGLSASPQLTQPARGSPG 831
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Match: A0A836CLF0_9STRA (Protein-tyrosine phosphatase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLF0_9STRA) HSP 1 Score: 214 bits (545), Expect = 2.070e-60 Identity = 105/162 (64.81%), Postives = 131/162 (80.86%), Query Frame = 3
Query: 501 QDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIDKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDR 986
QDN+PAKV DR++IGSIHAAFNQD + +GITHVLNASGLPATFPR FTYF VD+RDKE ++IL A+GA ++F+EAG +KGGVLVHCAGGRSRSAAF+ A++M Q ++D A Q++ ARPV ++NRGFE QLRAY A DVF +HQ+MLR R + +R
Sbjct: 1 QDNLPAKVVDRVYIGSIHAAFNQDGLLARGITHVLNASGLPATFPRSFTYFNVDLRDKEEADILGALGAASVFIEAGTEKGGVLVHCAGGRSRSAAFIAAYLMMKQDFTFDQAVEQLKAARPVVAINRGFELQLRAYEATGYDVFQSHQLMLRARVSQNTER 162
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Match: A0A835Z9L3_9STRA (MAP kinase phosphatase with leucine-rich repeats protein 1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L3_9STRA) HSP 1 Score: 200 bits (509), Expect = 1.570e-55 Identity = 97/161 (60.25%), Postives = 125/161 (77.64%), Query Frame = 3
Query: 483 LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIDKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIR 965
L LVQDN PA+V ++IGSIHAAFNQD + +GITHVLNASGLPATFPR FTYF VDIRD+E + IL A+GA +F++AG++KGGVLVHCAGGRSRSAA + ++M+ ++D A +R RPV ++N+GFEQQLRA+ A + D+F ++QMMLR R
Sbjct: 9 LKSELVQDNAPARVVANVYIGSIHAAFNQDGLAQRGITHVLNASGLPATFPRAFTYFNVDIRDREDAAILGALGATAVFIDAGVEKGGVLVHCAGGRSRSAAIIAGYLMAKHAYTFDRALEALRVVRPVVAINKGFEQQLRAFEATRFDLFKSNQMMLRAR 169
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Match: A0A6G0WNR0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNR0_9STRA) HSP 1 Score: 190 bits (483), Expect = 2.450e-48 Identity = 100/186 (53.76%), Postives = 134/186 (72.04%), Query Frame = 3
Query: 456 MTKR--ANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIDKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMML--RIRAAALLDRRNLLL 1001
M KR A PP L SLVQDNVP +V +LWIGSIHAAFN +++ ++ I+HVLN S AT+P+ FTY TVDIRDK+ +N+L+ I ++F+EAGI++GG+LVHCAGGRSRS A V+A++M T G SY+ A +VR ARPV ++N GFE QLR A+ D++ AHQ +L +I A + +NL L
Sbjct: 8 MEKRTKAAPPSLQSSLVQDNVPCEVIPKLWIGSIHAAFNLEALHERKISHVLNVSSTVATYPQAFTYLTVDIRDKDYTNLLSCIPITSVFIEAGINQGGILVHCAGGRSRSPAIVMAYLMLTMGLSYEDALTKVRTARPVVALNSGFEDQLRCMEKAKRDIYLAHQWLLQGKIVRARMRRSQNLAL 193
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Match: A0A485LIB3_9STRA (Aste57867_21739 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIB3_9STRA) HSP 1 Score: 191 bits (486), Expect = 2.690e-48 Identity = 96/177 (54.24%), Postives = 129/177 (72.88%), Query Frame = 3
Query: 471 NPPP---LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIDKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRN 992
N PP L SLVQDN+P +V +LWIGSIH+AFN ++++++ I+HVLN SG AT+P++FTY TVD+RDKE +NIL+ + +F+E G+ +GGVLVHCAGGRSRS A +A IMST G SYD A +VR ARPV S+N GFE QLR + A+ D++ AHQM+L+ + RR+
Sbjct: 8 NKPPSLALQPSLVQDNIPCEVIPKLWIGSIHSAFNFEAIKERKISHVLNVSGTVATYPQEFTYLTVDLRDKEYTNILSCVPITTVFLETGMQQGGVLVHCAGGRSRSPAIAIAHIMSTLGLSYDDALTKVRTARPVVSLNTGFEDQLRCFEKAKRDIYGAHQMLLQTKLVRARMRRS 184
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Match: W4G0P6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0P6_9STRA) HSP 1 Score: 192 bits (488), Expect = 3.570e-48 Identity = 101/197 (51.27%), Postives = 140/197 (71.07%), Query Frame = 3
Query: 423 LRA*GA*GSHAMTK-----RANPP--PLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIDKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRN 992
+ A G S AM K R+ PP L SLVQDN+P +V +LW+GS+HAAFN ++++++ I+HVLN SG AT+P++FTY TVDIRDK+ +N+L+ + +F+E+G+ GGVLVHCAGGRSRS A VVA++MST G S+D A +VR ARPVAS+N GFE QLR + A+ DV+ AHQ++L+ + RR+
Sbjct: 1 MAAAGTTTSVAMKKSLSAQRSKPPCLALQPSLVQDNLPCEVVPKLWVGSVHAAFNFEAIKERKISHVLNVSGTVATYPQEFTYLTVDIRDKDYTNLLSCVPIATVFLESGMQHGGVLVHCAGGRSRSPAIVVAYLMSTLGTSFDEALIKVRTARPVASLNSGFEDQLRCFEKAKRDVYVAHQLLLQTKIVRARLRRS 197
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Match: A0A1V9ZRS5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRS5_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.970e-47 Identity = 97/185 (52.43%), Postives = 133/185 (71.89%), Query Frame = 3
Query: 447 SHAMTKRANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIDKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLL 1001
S T++ L SLVQDN+P++V +LW+GSIHAAFN ++++++ ITHVLN SG AT+P+ FTY +D+RDKE +NIL+ I +F+EAG+ GGVLVHCAGGRSRS A +A+IMST G SYD A A++R RPV S+N GFE+QL+ + A+ DVF AHQM+L+ + +RR+ L
Sbjct: 383 SSMSTRKPPSLALQPSLVQDNLPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLAIDVRDKEYTNILSCIPVATVFLEAGMQNGGVLVHCAGGRSRSPAIAIAYIMSTLGFSYDDALAKLRSIRPVVSLNSGFEEQLQCFEKAKLDVFKAHQMLLQSKIVRARNRRSQCL 567
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Match: A0A024UED3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UED3_9STRA) HSP 1 Score: 189 bits (480), Expect = 3.360e-47 Identity = 94/180 (52.22%), Postives = 133/180 (73.89%), Query Frame = 3
Query: 471 NPPP---LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIDKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLL 1001
N PP L SLVQDN+P +V +LW+GS+HAAFN ++++++ ITHVLN SG AT+P +FTY TVD+RDK+ +N+L+ I +F+E+G+ +GG+LVHCAGGRSRS A V+A++MS G S+D A ++VR ARPV +N GFE QLR + A+ DV+AAHQ++L+ + RR+ LL
Sbjct: 22 NKPPCLALQPSLVQDNLPCEVIPKLWVGSVHAAFNFEAIKERKITHVLNVSGTIATYPHEFTYLTVDLRDKDYTNLLSCIPIATVFLESGMQQGGILVHCAGGRSRSPAIVIAYLMSALGHSFDDAISKVRIARPVVQLNSGFEDQLRCFEKAKRDVYAAHQLLLQTKIVRARLRRSQLL 201
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Match: A0A0A7CLY8_9STRA (Secreted protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CLY8_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.200e-46 Identity = 97/185 (52.43%), Postives = 133/185 (71.89%), Query Frame = 3
Query: 447 SHAMTKRANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIDKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRRNLLL 1001
S T++ L SLVQDN+P++V +LW+GSIHAAFN ++++++ ITHVLN SG AT+P+ FTY +D+RDKE +NIL+ I +F+EAG+ GGVLVHCAGGRSRS A +A+IMST G SYD A A++R RPV S+N GFE+QL+ + A+ DVF AHQM+L+ + +RR+ L
Sbjct: 424 SSMSTRKPPSLALQPSLVQDNLPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLAIDVRDKEYTNILSCIPVATVFLEAGMQNGGVLVHCAGGRSRSPAIAIAYIMSTLGFSYDDALAKLRSIRPVVSLNSGFEEQLQCFEKAKLDVFKAHQMLLQSKIVRARNRRSQCL 608
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Match: A0A067CFV7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFV7_SAPPC) HSP 1 Score: 183 bits (464), Expect = 1.140e-45 Identity = 91/177 (51.41%), Postives = 126/177 (71.19%), Query Frame = 3
Query: 468 ANPPP---LSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLNASGLPATFPRQFTYFTVDIRDKESSNILTAIGAVNIFVEAGIDKGGVLVHCAGGRSRSAAFVVAFIMSTQGCSYDAAYAQVRRARPVASVNRGFEQQLRAYGAAQCDVFAAHQMMLRIRAAALLDRR 989
A PP L +LVQDN+P++V +LW+GSIHAAFN ++++++ ITHVLN SG AT+P+ FTY T+D+RDKE +N+L+ + +F+EAG+ GGVLVHCAGGRSRS A +A+IM TQG Y A+A++R R V ++N GFE QL+ AQ DVF AHQ++L+ + RR
Sbjct: 3 ARKPPSLALQPALVQDNIPSEVVPKLWVGSIHAAFNFEAIKERKITHVLNVSGTVATYPQDFTYLTIDLRDKEYTNLLSCLPITTVFLEAGMQNGGVLVHCAGGRSRSPAIAMAYIMLTQGFPYAEAFAKLRSVRSVVALNTGFEDQLQCLEKAQLDVFKAHQLLLQTKMVRARARR 179 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14.3122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14.3122.1 >prot_Ecto-sp13_S_contig14.3122.1 ID=prot_Ecto-sp13_S_contig14.3122.1|Name=mRNA_Ecto-sp13_S_contig14.3122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=936bp MTKRANPPPLSRSLVQDNVPAKVTDRLWIGSIHAAFNQDSMQDKGITHVLback to top mRNA from alignment at Ecto-sp13_S_contig14:49187..56488- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14.3122.1 ID=mRNA_Ecto-sp13_S_contig14.3122.1|Name=mRNA_Ecto-sp13_S_contig14.3122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7302bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14:49187..56488- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14:49187..56488- >mRNA_Ecto-sp13_S_contig14.3122.1 ID=mRNA_Ecto-sp13_S_contig14.3122.1|Name=mRNA_Ecto-sp13_S_contig14.3122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2808bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14:49187..56488- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |