prot_Ecto-sp13_S_contig10309.312.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig10309.312.1
Unique Name	prot_Ecto-sp13_S_contig10309.312.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	690

Homology

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BLAST of mRNA_Ecto-sp13_S_contig10309.312.1 vs. uniprot
Match: A0A6H5KIL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL3_9PHAE)

HSP 1 Score: 460 bits (1184), Expect = 2.370e-147
Identity = 336/448 (75.00%), Postives = 346/448 (77.23%), Query Frame = 0

Query:  259 MDLEKFVGYRVFADDAKARCRELDRCGEGLNQQELCDALVSLLRRQAPGNDAGSGGA----------SEEKEGAQQGAGGKREREDLKHYEEDKQARRSASPQRLPSRLVPTPPSA--VSLLPLGSGRSVATSG-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESRDLGQVGSSVGCAXXXXXXXXXXXXXXXXXXXXXXQRRQPRRPE-ANGTAPLSTGAAKSRSSRVGSVAADGGVSGEGREAETKSGAGKRTTGPADDENVTNKRXXXXXXXXGNHRVLLRGGAGASAACAAVGRDSNSPAPRKRPRRSSGIFPESVISKVPRLALDLSARLGCGVTTEQAKAACRELDRCGDRLTSEELADACVGHFLVTPPAAQDTEDKEGXXXXXXXXXXXXXXXXXXXX--PPVVGTSPSQAVKPAGLPDSVAAKV 690
            MDLEKFVGYRVFADDAKARCRELDRCGEGLNQQELCDALVSLL+RQAP NDAGSGGA          SEE EGAQQGAG +RER+D K YE+DKQARRSASPQRLPSRL+ TPPSA  VSLLP GSG SV  SG G                  XXXXXXXXXXXXXXXXXXXXXXXX SRDL QVGSSVGCA      XXXXXXXXXXXXXXXX          AN TAPL+ GAAK   SRV SVAA   VSGEGR AETK G+GKRTTGPADD N TNKR        GNHRVLLR GAG SAA AAVGR SNSPAPRKRPRRSSGIFPESVISKVPRLALDLSARLGCGVTTEQAKAACRELDRCGDRLTSEELADACVGHFL+ PPAAQDTE +EG           XXXXXXX    PPVVGTSPSQAVKPA +PDSVAAKV
Sbjct:    1 MDLEKFVGYRVFADDAKARCRELDRCGEGLNQQELCDALVSLLQRQAPSNDAGSGGADAACYGSRGGSEENEGAQQGAGRERERKDSKRYEDDKQARRSASPQRLPSRLLRTPPSASAVSLLPSGSGPSVVASGVGRRGKDKKKSQRELGKGGEXXXXXXXXXXXXXXXXXXXXXXXXXSRDLAQVGSSVGCADNNAGGXXXXXXXXXXXXXXXXXXXXXXXXXXANRTAPLNAGAAKXXXSRVVSVAASDSVSGEGRGAETKLGSGKRTTGPADDANETNKRRRTGGAVDGNHRVLLRVGAGVSAAGAAVGRGSNSPAPRKRPRRSSGIFPESVISKVPRLALDLSARLGCGVTTEQAKAACRELDRCGDRLTSEELADACVGHFLIIPPAAQDTEGQEGEGHAAQLPSPPXXXXXXXPVQLPPVVGTSPSQAVKPARIPDSVAAKV 448

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BLAST of mRNA_Ecto-sp13_S_contig10309.312.1 vs. uniprot
Match: D8LT08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT08_ECTSI)

HSP 1 Score: 421 bits (1081), Expect = 4.210e-133
Identity = 372/680 (54.71%), Postives = 382/680 (56.18%), Query Frame = 0

Query:   13 LGRYVSLQEVKDAVRLLRRSGAGMDRQALLDGCLDVMGESGNGPFSSLPSTDGSGTVAMAPPKDCRTTAADGGGRGGSGSANARPNEGGEASPASSSSXIXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKTPTGDRRPPTRKRGRPKSTGSGRLEGDGGGVRGRLGHEEYVGVAASKTPPILKTEAKPVAKGGSDXXXXXXXXXXXXXXXXXX--AGVNPRCLSKRRARQRCGLIPESVIAKVPRLLMDLEKFVGYRVFADDAKARCRELDRCGEGLNQQELCDALVSLLRRQAPGNDAGSGGASEEKEGAQQGAGGKREREDLKHYEEDKQARRSASPQRLPSRLVPTPPSAVSLLPLGSGRSVATSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESRDLGQVGSSVGCAXXXXXXXXXXXXXXXXXXXXXXQRRQPRRPEANGTAPLSTGAAKSRSSRVGSVAADGGVSGEGREAETKSGAGKRTTGPADDENVTNKRXXXXXXXXGNHRVLLRGGAGASAACAAVGRDSNSPAPRKRPRRSSGIFPESVISKVPRLALDLSARLGCGVTTEQAKAACRELDRCGDRLTSEELADACVGHFLVTPPAAQDTEDKEGXXXXXXXXXXXXXXXXXXXXPPVVGTSPSQAVKPAGLPDSVAAKV 690
            LGRYVSLQEVKDAVRLLRRSGAGMDRQAL+DGCL                                                                                                                                                       E+KP AKGG  XXXXXXXXXXXXXXXXXX  AGV PR LSKR ARQ CGLIPESVIAKVPRLLMDLEKFVGYRVFADDAKARCRELDRCGEGLNQQELCDALVSLLR QAP NDAGSG                                                         GSG +   S  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                        Q +R EANGTAPL+ GAAKSRSSR GSVA  G VSGEGR AETKSGAGKRTTGPADDEN TNKRXXXXXXXXGNHRVLLRGGAGASAA AAVG  +NSPAPRKRPRRSSGIFPESVISKVPRLALDLSARLGCGVTTEQAKAACRELDRCGDRLTS+ELADACVGHFL+TPPAAQ TED+EG                    PPVVGTSPSQAVKPAG+PDSVAAKV
Sbjct:   17 LGRYVSLQEVKDAVRLLRRSGAGMDRQALVDGCL------------------------------------------------------------------------------------------------------------------------------------------------------RESKPAAKGGXXXXXXXXXXXXXXXXXXXXXXAGVGPRGLSKRGARQPCGLIPESVIAKVPRLLMDLEKFVGYRVFADDAKARCRELDRCGEGLNQQELCDALVSLLRLQAPSNDAGSG---------------------------------------------------------GSGAACYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------QHQRQEANGTAPLNAGAAKSRSSRAGSVAGGGSVSGEGRGAETKSGAGKRTTGPADDENETNKRXXXXXXXXGNHRVLLRGGAGASAAGAAVG-STNSPAPRKRPRRSSGIFPESVISKVPRLALDLSARLGCGVTTEQAKAACRELDRCGDRLTSKELADACVGHFLITPPAAQHTEDQEGEGHAAQLPLPPSSPPAPTPLPPVVGTSPSQAVKPAGIPDSVAAKV 453

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig10309.312.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig10309.312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KIL3_9PHAE	2.370e-147	75.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LT08_ECTSI	4.210e-133	54.71	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 398..428

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig10309	contig	Ecto-sp13_S_contig10309:209..4807 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig10309.312.1	mRNA_Ecto-sp13_S_contig10309.312.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig10309 209..4807 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig10309.312.1 ID=prot_Ecto-sp13_S_contig10309.312.1|Name=mRNA_Ecto-sp13_S_contig10309.312.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=690bp
QIPCLSADLNTTLGRYVSLQEVKDAVRLLRRSGAGMDRQALLDGCLDVMG
ESGNGPFSSLPSTDGSGTVAMAPPKDCRTTAADGGGRGGSGSANARPNEG
GEASPASSSSSIASSPASAGTRAAEAAAAAEAAATAADSSSTKTPTGDRR
PPTRKRGRPKSTGSGRLEGDGGGVRGRLGHEEYVGVAASKTPPILKTEAK
PVAKGGSDSSRRRTSAGGGGGGGGAAAGVNPRCLSKRRARQRCGLIPESV
IAKVPRLLMDLEKFVGYRVFADDAKARCRELDRCGEGLNQQELCDALVSL
LRRQAPGNDAGSGGASEEKEGAQQGAGGKREREDLKHYEEDKQARRSASP
QRLPSRLVPTPPSAVSLLPLGSGRSVATSGGGGRGKAKKKSQKEFGGRGE
GEEEEEEEEEEEEEEEKEEEEKEESRDLGQVGSSVGCADGNAGGSCGGGA
PPTPSPSPPPQRRQPRRPEANGTAPLSTGAAKSRSSRVGSVAADGGVSGE
GREAETKSGAGKRTTGPADDENVTNKRRRTGGADDGNHRVLLRGGAGASA
ACAAVGRDSNSPAPRKRPRRSSGIFPESVISKVPRLALDLSARLGCGVTT
EQAKAACRELDRCGDRLTSEELADACVGHFLVTPPAAQDTEDKEGEGQAA
QLPSPPPSPPAPAPLPPVVGTSPSQAVKPAGLPDSVAAKV