prot_Ecto-sp13_S_contig14.3115.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14.3115.1
Unique Nameprot_Ecto-sp13_S_contig14.3115.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length365
Homology
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 642 bits (1657), Expect = 1.690e-231
Identity = 352/364 (96.70%), Postives = 355/364 (97.53%), Query Frame = 0
Query:    1 MRLPCAAGLVVAACPCVPGFLLPLPAHDVGHQGKLFARQGCAATRSTRGREATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKEDEDGXXXXXXXXXXXXXXXXXXXXXXXYDFSDDLAAREQDEKRLAEELARKFPDIGRVRVDKFGNIVGGVNPFEGTDVKLEDQPIPDDDEQDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDEVF 364
            MRLPCAAGLVVAACPCVPGFLLPLP HDVG QG LFAR  CAATRSTRGREATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKE+   XXXXXXXXXXXXXXXXXXXXXX YDFSDDLAAREQDEKRLAEELARKFPDIGRV+VDKFGNIVGGVNPFEGTDVKLEDQPIPDDDE+DFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDEVF
Sbjct:    1 MRLPCAAGLVVAACPCVPGFLLPLPTHDVGQQGTLFAR--CAATRSTRGREATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKEEXXXXXXXXXXXXXXXXXXXXXXXXXKYDFSDDLAAREQDEKRLAEELARKFPDIGRVKVDKFGNIVGGVNPFEGTDVKLEDQPIPDDDEKDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDEVF 362          
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.260e-85
Identity = 151/309 (48.87%), Postives = 199/309 (64.40%), Query Frame = 0
Query:   55 TRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKEDEDGXXXXXXXXXXXXXXXXXXXXXXXYDFSDDLAAREQDEKRLAEELARKFPDIGRVRVDKFGNIVGGVNPFEGTDVKLE-DQPIPDDDEQDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDE 362
            TRL+  GKIFGED+          ++ PA + +  E  D                         D    L   E +E+ +A E+ +++PD   V VD  GN++GGV+P+   +  LE  +P       ++PEVAG   GMDDP DAPWR EAE+I+R +V+  GL CYDI+W+FH+LEVTVTR +     EEA YVDSD LM+AI+ VN ALE  EE L+VLGRHEL++ATPGAKD+LTTD++FKA+KGF+V+V  G     +RE+ GKL ERTFDEL++M+ GRKVRIPLALVDEVRLP A +E G++
Sbjct:   69 TRLHARGKIFGEDDEAEE------VVVPAEEFD-DESLDVLTADMGGDEDDPFIASMRGGASDEDMLAGLTEEELEEQAVAVEVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQ 370          
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 138 bits (348), Expect = 6.150e-34
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 0
Query:  179 DEQDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTR-------AEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELK---GKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 361
            D  + PE  G   GMDDP DAPWRL+AE+++R  V   G   YD+ W  H + V +TR       +EG+G + +A  + SD++++  + V  AL   +  L VL R  L V TPGAKDVLTT+++F+A++G+EV V    P  +        G+LLER     ++   G+ V IP  +V EVRLP A+ EA D
Sbjct:  113 DWDNIPEYGGEFLGMDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDGGNVESEGEG-VADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 304          
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.480e-32
Identity = 77/193 (39.90%), Postives = 108/193 (55.96%), Query Frame = 0
Query:  179 DEQDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRA-------EGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELK---GKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 361
            D  + PE  G   GMDDP DAPWRL AE ++R  V   G   YD+ W  H + V +TR        EG+G + +A  + SD++++  + V  AL   +  L +L R  L V TPGAKDVLTT+++F+A++G+EV V    P  +        G+LLER     ++   G+ V IP  +V EVRLP A+ EA D
Sbjct:  223 DWDNIPEYGGEFLGMDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDVGNVENEGEG-VADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 414          
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.490e-28
Identity = 72/173 (41.62%), Postives = 107/173 (61.85%), Query Frame = 0
Query:  186 VAGVIAGMDDPADAPWRLEAEKIVRDQVQA-CGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGP--FKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPA 355
            V G++ G+DDP D  WRL+AE++VR  V+   G+  YD+ W    L+V + +   +G   +   V++     A + +  ALEA +EEL +L RHEL V++ GAK++L ++++F+A+KGF+V+VK   P    K+  L GKL+ R   E  I   GR VRIP  LV+EVRLP A
Sbjct:  122 VYGIMNGLDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 289          
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S2PI76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PI76_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.070e-24
Identity = 66/178 (37.08%), Postives = 91/178 (51.12%), Query Frame = 0
Query:  192 GMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVT--------------------------RAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIP 343
            G DDP DAPWR+E E+I+RD  ++ G    D+ W      VT++                          R E D  + E A   S   + A   + A  EA + +L VL RHE++V +PG  +VL T +QF A+KGF+VIV+   P    R L+GKLLERT  +  I + G+KV IP
Sbjct:   46 GCDDPMDAPWRIEGEQIIRDAAESVGAVVEDVTWGMAMCTVTISDTTGVKKDTSEYLEERKKRDDEYPWMREERDAVVTEDAVDMSGVGVVAGTIIEALQEAEDRDLDVLSRHEIIVTSPGVSNVLETQRQFDAFKGFDVIVQTIDPLGSNRRLEGKLLERTALDTFITQKGKKVTIP 223          
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S1DE94_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE94_CYCTE)

HSP 1 Score: 106 bits (264), Expect = 2.710e-24
Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 0
Query:  246 AAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAG 360
            A  VD+ K+    K +   L+++E  L +L RHEL++ATPGA D L T +QF AY+GF+VIV+   PF   R L GKL+ER   +L+I K GR V IPL  V  VRLPPA  E G
Sbjct:   15 AMVVDTSKISVIAKYILKGLDSQEHRLRILDRHELILATPGAPDTLETQRQFDAYRGFDVIVETVDPFNSNRVLTGKLVERNSMDLIIRKKGRMVTIPLNFVSSVRLPPAKREKG 129          
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.160e-22
Identity = 73/190 (38.42%), Postives = 106/190 (55.79%), Query Frame = 0
Query:  188 GVIAGMDDPADAPWRLEA----EKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAI-KGVNAALEAREEEL---FVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKK-------RELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDE 362
            G   GMDDP DAPWRLEA    E++V+++         D+LW F  +++TVT      P E+A    S  +++ + + ++  L   E EL     L  H L V TPGA +V+TT +QF+AYKGF+V V   G  K         + L G L  RT +E+ + + GR V++P+A+V EVRLP   +E GD+
Sbjct:   96 GPALGMDDPLDAPWRLEAAAEIEELVKEKYP--DAQAVDVLWAFSNVQITVT------PKEDANVPLSSAVIEMLTRAISDDLFPAEPELAHDHWLTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGKTLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGDK 277          
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S4CJH8_9EUGL (Selenoprotein O (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CJH8_9EUGL)

HSP 1 Score: 106 bits (265), Expect = 1.950e-21
Identity = 60/160 (37.50%), Postives = 91/160 (56.88%), Query Frame = 0
Query:  202 RLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 361
            +++ E+ +   ++ CG+  YD+ W   R+EV V+      P       DS+ L QAI+ V   L A  +   ++ ++EL +ATPGA DVL TDK+F A+KGF V+V    P KKK + +G L+ R  + + +   GR +++P  LV EV LPP   E GD
Sbjct:  344 KVDMERTIEASLRQCGVYLYDLSWVNDRIEVIVSTHP---PQHAPEGPDSEVLEQAIRAVREQLWASPQMEAMMEKYELSIATPGASDVLRTDKEFVAWKGFPVVVTTTQPHKKKTKFEGNLVRRDDEFVHLNLKGRPIKVPRELVAEVSLPPPKYEKGD 500          
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.100e-20
Identity = 60/153 (39.22%), Postives = 92/153 (60.13%), Query Frame = 0
Query:  206 EKIVRDQVQA-CGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGP--FKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPA 355
            +++VR  V+   G+  YD+ W    L+V + +   +G   +   V++     A + +  ALEA +EEL +L RHEL V++ GAK++L ++++F+A+KGF+V+VK   P    K+  L GKL+ R   E  I   GR VRIP  LV+EVRLP A
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 159          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF3_ECTSI1.690e-23196.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C944_9STRA1.260e-8548.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D4Q5_9STRA6.150e-3440.41Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TJE5_9STRA3.480e-3239.90Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2SW06_9STRA1.490e-2841.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2PI76_9STRA1.070e-2437.08Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1DE94_CYCTE2.710e-2449.57Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1TZY1_9STRA4.160e-2238.42Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S4CJH8_9EUGL1.950e-2137.50Selenoprotein O (Fragment) n=1 Tax=Eutreptiella gy... [more]
A0A7S2SV25_9STRA1.100e-2039.22Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..364
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.49
IPR036847Ribosome maturation factor RimP, C-terminal domain superfamilySUPERFAMILY74942YhbC-like, C-terminal domaincoord: 291..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14contigEcto-sp13_S_contig14:5810..11569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14.3115.1mRNA_Ecto-sp13_S_contig14.3115.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14 5810..12446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14.3115.1 ID=prot_Ecto-sp13_S_contig14.3115.1|Name=mRNA_Ecto-sp13_S_contig14.3115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=365bp
MRLPCAAGLVVAACPCVPGFLLPLPAHDVGHQGKLFARQGCAATRSTRGR
EATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKEDEDGGEEGGS
DETGTGEKRKRRKRRKKYDFSDDLAAREQDEKRLAEELARKFPDIGRVRV
DKFGNIVGGVNPFEGTDVKLEDQPIPDDDEQDFPEVAGVIAGMDDPADAP
WRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVD
SDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAY
KGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEV
RLPPALVEAGDEVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036847RimP_C_sf