mRNA_Ecto-sp13_S_contig14.3115.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14.3115.1
Unique NamemRNA_Ecto-sp13_S_contig14.3115.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 642 bits (1657), Expect = 1.060e-226
Identity = 352/364 (96.70%), Postives = 355/364 (97.53%), Query Frame = 1 
Query:    1 MRLPCAAGLVVAACPCVPGFLLPLPAHDVGHQGKLFARQGCAATRSTRGREATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKEDEDGXXXXXXXXXXXXXXXXXXXXXXXYDFSDDLAAREQDEKRLAEELARKFPDIGRVRVDKFGNIVGGVNPFEGTDVKLEDQPIPDDDEQDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDEVF 1092
            MRLPCAAGLVVAACPCVPGFLLPLP HDVG QG LFAR  CAATRSTRGREATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKE+   XXXXXXXXXXXXXXXXXXXXXX YDFSDDLAAREQDEKRLAEELARKFPDIGRV+VDKFGNIVGGVNPFEGTDVKLEDQPIPDDDE+DFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDEVF
Sbjct:    1 MRLPCAAGLVVAACPCVPGFLLPLPTHDVGQQGTLFAR--CAATRSTRGREATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKEEXXXXXXXXXXXXXXXXXXXXXXXXXKYDFSDDLAAREQDEKRLAEELARKFPDIGRVKVDKFGNIVGGVNPFEGTDVKLEDQPIPDDDEKDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDEVF 362
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BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 273 bits (697), Expect = 5.240e-82
Identity = 151/309 (48.87%), Postives = 199/309 (64.40%), Query Frame = 1 
Query:  163 TRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKEDEDGXXXXXXXXXXXXXXXXXXXXXXXYDFSDDLAAREQDEKRLAEELARKFPDIGRVRVDKFGNIVGGVNPFEGTDVKLE-DQPIPDDDEQDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDE 1086
            TRL+  GKIFGED+          ++ PA + +  E  D                         D    L   E +E+ +A E+ +++PD   V VD  GN++GGV+P+   +  LE  +P       ++PEVAG   GMDDP DAPWR EAE+I+R +V+  GL CYDI+W+FH+LEVTVTR +     EEA YVDSD LM+AI+ VN ALE  EE L+VLGRHEL++ATPGAKD+LTTD++FKA+KGF+V+V  G     +RE+ GKL ERTFDEL++M+ GRKVRIPLALVDEVRLP A +E G++
Sbjct:   69 TRLHARGKIFGEDDEAEE------VVVPAEEFD-DESLDVLTADMGGDEDDPFIASMRGGASDEDMLAGLTEEELEEQAVAVEVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQ 370
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BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 138 bits (348), Expect = 3.690e-32
Identity = 78/193 (40.41%), Postives = 111/193 (57.51%), Query Frame = 1 
Query:  535 DEQDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTR-------AEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELK---GKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 1083
            D  + PE  G   GMDDP DAPWRL+AE+++R  V   G   YD+ W  H + V +TR       +EG+G + +A  + SD++++  + V  AL   +  L VL R  L V TPGAKDVLTT+++F+A++G+EV V    P  +        G+LLER     ++   G+ V IP  +V EVRLP A+ EA D
Sbjct:  113 DWDNIPEYGGEFLGMDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDGGNVESEGEG-VADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 304
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BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.890e-30
Identity = 77/193 (39.90%), Postives = 108/193 (55.96%), Query Frame = 1 
Query:  535 DEQDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRA-------EGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELK---GKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 1083
            D  + PE  G   GMDDP DAPWRL AE ++R  V   G   YD+ W  H + V +TR        EG+G + +A  + SD++++  + V  AL   +  L +L R  L V TPGAKDVLTT+++F+A++G+EV V    P  +        G+LLER     ++   G+ V IP  +V EVRLP A+ EA D
Sbjct:  223 DWDNIPEYGGEFLGMDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDVGNVENEGEG-VADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 414
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BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.710e-27
Identity = 72/173 (41.62%), Postives = 107/173 (61.85%), Query Frame = 1 
Query:  556 VAGVIAGMDDPADAPWRLEAEKIVRDQVQA-CGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGP--FKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPA 1065
            V G++ G+DDP D  WRL+AE++VR  V+   G+  YD+ W    L+V + +   +G   +   V++     A + +  ALEA +EEL +L RHEL V++ GAK++L ++++F+A+KGF+V+VK   P    K+  L GKL+ R   E  I   GR VRIP  LV+EVRLP A
Sbjct:  122 VYGIMNGLDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 289
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BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S2PI76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PI76_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.250e-23
Identity = 66/178 (37.08%), Postives = 91/178 (51.12%), Query Frame = 1 
Query:  574 GMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVT--------------------------RAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIP 1029
            G DDP DAPWR+E E+I+RD  ++ G    D+ W      VT++                          R E D  + E A   S   + A   + A  EA + +L VL RHE++V +PG  +VL T +QF A+KGF+VIV+   P    R L+GKLLERT  +  I + G+KV IP
Sbjct:   46 GCDDPMDAPWRIEGEQIIRDAAESVGAVVEDVTWGMAMCTVTISDTTGVKKDTSEYLEERKKRDDEYPWMREERDAVVTEDAVDMSGVGVVAGTIIEALQEAEDRDLDVLSRHEIIVTSPGVSNVLETQRQFDAFKGFDVIVQTIDPLGSNRRLEGKLLERTALDTFITQKGKKVTIP 223
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BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S1DE94_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE94_CYCTE)

HSP 1 Score: 106 bits (264), Expect = 2.440e-23
Identity = 57/115 (49.57%), Postives = 73/115 (63.48%), Query Frame = 1 
Query:  736 AAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAG 1080
            A  VD+ K+    K +   L+++E  L +L RHEL++ATPGA D L T +QF AY+GF+VIV+   PF   R L GKL+ER   +L+I K GR V IPL  V  VRLPPA  E G
Sbjct:   15 AMVVDTSKISVIAKYILKGLDSQEHRLRILDRHELILATPGAPDTLETQRQFDAYRGFDVIVETVDPFNSNRVLTGKLVERNSMDLIIRKKGRMVTIPLNFVSSVRLPPAKREKG 129
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BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.830e-21
Identity = 73/190 (38.42%), Postives = 106/190 (55.79%), Query Frame = 1 
Query:  562 GVIAGMDDPADAPWRLEA----EKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAI-KGVNAALEAREEEL---FVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKK-------RELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDE 1086
            G   GMDDP DAPWRLEA    E++V+++         D+LW F  +++TVT      P E+A    S  +++ + + ++  L   E EL     L  H L V TPGA +V+TT +QF+AYKGF+V V   G  K         + L G L  RT +E+ + + GR V++P+A+V EVRLP   +E GD+
Sbjct:   96 GPALGMDDPLDAPWRLEAAAEIEELVKEKYP--DAQAVDVLWAFSNVQITVT------PKEDANVPLSSAVIEMLTRAISDDLFPAEPELAHDHWLTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGKTLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGDK 277
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BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S4CJH8_9EUGL (Selenoprotein O (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CJH8_9EUGL)

HSP 1 Score: 106 bits (265), Expect = 3.890e-20
Identity = 60/160 (37.50%), Postives = 91/160 (56.88%), Query Frame = 1 
Query:  604 RLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGD 1083
            +++ E+ +   ++ CG+  YD+ W   R+EV V+      P       DS+ L QAI+ V   L A  +   ++ ++EL +ATPGA DVL TDK+F A+KGF V+V    P KKK + +G L+ R  + + +   GR +++P  LV EV LPP   E GD
Sbjct:  344 KVDMERTIEASLRQCGVYLYDLSWVNDRIEVIVSTHP---PQHAPEGPDSEVLEQAIRAVREQLWASPQMEAMMEKYELSIATPGASDVLRTDKEFVAWKGFPVVVTTTQPHKKKTKFEGNLVRRDDEFVHLNLKGRPIKVPRELVAEVSLPPPKYEKGD 500
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BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.750e-20
Identity = 60/153 (39.22%), Postives = 92/153 (60.13%), Query Frame = 1 
Query:  616 EKIVRDQVQA-CGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGP--FKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPA 1065
            +++VR  V+   G+  YD+ W    L+V + +   +G   +   V++     A + +  ALEA +EEL +L RHEL V++ GAK++L ++++F+A+KGF+V+VK   P    K+  L GKL+ R   E  I   GR VRIP  LV+EVRLP A
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 159
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14.3115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF3_ECTSI1.060e-22696.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C944_9STRA5.240e-8248.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D4Q5_9STRA3.690e-3240.41Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TJE5_9STRA1.890e-3039.90Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2SW06_9STRA3.710e-2741.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2PI76_9STRA1.250e-2337.08Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1DE94_CYCTE2.440e-2349.57Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1TZY1_9STRA3.830e-2138.42Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S4CJH8_9EUGL3.890e-2037.50Selenoprotein O (Fragment) n=1 Tax=Eutreptiella gy... [more]
A0A7S2SV25_9STRA6.750e-2039.22Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14contigEcto-sp13_S_contig14:5810..12446 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score648.7
Seed ortholog evalue1.7e-183
Seed eggNOG ortholog2880.D7FLF3
Model size1972
Hectar predicted targeting categorysignal peptide
Exons8
EggNOG OGs2E9GY@1,2SFUT@2759
Ec32 ortholog descriptionRibosome maturation factor RimP, C-terminal
Ec32 orthologEc-12_007950.1
Cds size1095
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14.3115.1prot_Ecto-sp13_S_contig14.3115.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14 5810..11569 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462746.9402704-CDS-Ecto-sp13_S_contig14:5809..59281681462746.9402704-CDS-Ecto-sp13_S_contig14:5809..5928Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14 5810..5928 +
1681462746.949918-CDS-Ecto-sp13_S_contig14:6051..61541681462746.949918-CDS-Ecto-sp13_S_contig14:6051..6154Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14 6052..6154 +
1681462746.9577074-CDS-Ecto-sp13_S_contig14:6367..65561681462746.9577074-CDS-Ecto-sp13_S_contig14:6367..6556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14 6368..6556 +
1681462746.965665-CDS-Ecto-sp13_S_contig14:7027..71591681462746.965665-CDS-Ecto-sp13_S_contig14:7027..7159Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14 7028..7159 +
1681462746.97408-CDS-Ecto-sp13_S_contig14:7589..76581681462746.97408-CDS-Ecto-sp13_S_contig14:7589..7658Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14 7590..7658 +
1681462746.9830198-CDS-Ecto-sp13_S_contig14:8979..91431681462746.9830198-CDS-Ecto-sp13_S_contig14:8979..9143Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14 8980..9143 +
1681462746.9999871-CDS-Ecto-sp13_S_contig14:9776..99261681462746.9999871-CDS-Ecto-sp13_S_contig14:9776..9926Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14 9777..9926 +
1681462747.0177438-CDS-Ecto-sp13_S_contig14:11400..115691681462747.0177438-CDS-Ecto-sp13_S_contig14:11400..11569Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14 11401..11569 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462747.0265944-UTR-Ecto-sp13_S_contig14:11569..124461681462747.0265944-UTR-Ecto-sp13_S_contig14:11569..12446Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig14 11570..12446 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14.3115.1

>prot_Ecto-sp13_S_contig14.3115.1 ID=prot_Ecto-sp13_S_contig14.3115.1|Name=mRNA_Ecto-sp13_S_contig14.3115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=365bp
MRLPCAAGLVVAACPCVPGFLLPLPAHDVGHQGKLFARQGCAATRSTRGR
EATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKEDEDGGEEGGS
DETGTGEKRKRRKRRKKYDFSDDLAAREQDEKRLAEELARKFPDIGRVRV
DKFGNIVGGVNPFEGTDVKLEDQPIPDDDEQDFPEVAGVIAGMDDPADAP
WRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVD
SDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAY
KGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEV
RLPPALVEAGDEVF*
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mRNA from alignment at Ecto-sp13_S_contig14:5810..12446+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14.3115.1 ID=mRNA_Ecto-sp13_S_contig14.3115.1|Name=mRNA_Ecto-sp13_S_contig14.3115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6637bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14:5810..12446+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCCTACCTTGCGCAGCCGGCCTGGTTGTTGCGGCGTGTCCGTGCGT
TCCTGGTTTCTTGCTGCCGTTACCAGCGCACGATGTGGGTCATCAGGGTA
AACTCTTCGCAAGGCAAGGGTTACGGCTTTCGATGTGACCTTGTGACCAT
GAATTCTATATTCTACTATTTCAACATGTACTTTGAAAAGCAAACTGAGG
TGTGTAGAATCGATCATGCTTGGTGCGTGTGATGCGGATCAGGTGTGCGG
CGACACGTTCAACGAGGGGACGAGAGGCGACGGCGACTCGGTTATACGTT
GGTGGCAAGATATTCGGCGAGGATGAGCCTACACCACCCCCGCAGGTGCA
CCATCGAAGATAAAAAGTGAAACTTTTGGCTTTGTGAAGAGTATTTTGTT
GTCGGGGCCTGATGCGATACCAGTGTCTGGTGCCATACATGCGTTTCTGT
TTCATGTATCTGTCTCATGTCGAGAATACACGGTTGTACACACCAATGCA
TTCTAATTCCTGCAAGTACTTACAATTAATCCATATCTTTTGCGGTGGGA
CATTCCAGGGCCAACCCGGACTTATCAAGCCAGCCGTGAAATCCAACCGG
AAAGAAGACGAGGACGGTGGAGAAGAAGGCGGTTCGGACGAGACTGGAAC
CGGAGAGAAGAGGAAACGGAGGAAACGACGGAAGAAGTACGACTTCTCGG
ACGATTTAGCGGCGAGGGAGCAGGACGAAAAGAGATTAGCGGAAGAGGTG
GGCGCGGGGCGTACGTTGCAGCGAAGCACGAACTCGAACAAAACATTGCG
GAATGCAGCCTGTTAACAGTAGTGTTACTACTCTGTACATTGCACGGTCA
CTAGCTGGTTGCTTGCAGGAAGCTTATAGGACGAAGTGCAGCAGGTCGCG
CGTTCATCGTTCGTATCTACGTCTACGATGATTGTCGACAAGAGAGACAA
GTGGAAAGGGCGAGGAACGCGAGAAGTTTAGTGCGCACGTGCGTAGAACG
GCCAAAAGAGGCAAAATGGCCAACGCAATCATCATGGGAAACAGTAGGGT
ACGTTTGTTCTGCGAGCTGTGTAGTTTGGTTGTTTGTTGGTTTGATTGAT
GTCCAGGGTACCGCCGTCGTGAAATACTTCATCTTGATGCGAGCTCTTCG
GTCTAGATTCGTGCACGAATGTAGATATCAGCCCTAAGTCTTCGCTCCTT
TGGTTCCCCTTGTTGCAGCTTGCTCGAAAGTTTCCGGATATCGGCCGGGT
GAGGGTGGATAAGTTTGGGAATATTGTTGGAGGTGTCAATCCCTTCGAAG
GCACAGATGTCAAGCTGGAGGATCAGCCAATACCGGATGATGACGAACAG
GTATGAGCTGTTTTCTGTTTCTCGAGAGGTAAATTTACATTTTCTATTCA
CGATTCTTTTGGATGAGACGTTTTGCGGTTTACGAAGGGCGACCACCGTT
CTGACCACAAACAAGAGGAAGCGTAGTTCACTCCGATGTATTGATTGAAG
AAGATTCGATTCTCCGGTAAGACTAACATATGCAAGCAGATAGTACTGAC
TTTGTTGTGCCCTACGAAGGAGAAGTCATTCACGCTTTACCTAGGATGAC
ATGTCCGATTGCTGCTGTTGGGAGAAACGAGCTATATTGTGGCTAAATGC
GCTTGATACAAGCAGTGGTCAAGAGCGGTAGCAGCTGTTGTCCCGCAGCG
TTTATCGAAAAGTGCACCAGTATGATTAAAGTACAGCATTCCAGCCCAAC
GATTACCGTTTTTGATATGCGTTCCTTCAGGATTTCCCAGAGGTGGCTGG
TGTGATTGCAGGAATGGACGATCCCGCGGATGCGCCTTGGAGGCTGGAGG
TGAGACTCTCAGCACAGTAGAAGTTGTGAGCCTTGTACAGCAGTTGCGAA
ACGTTGGCCGTCGTGGCTAGGCCTCTACCACAGGGAGGAATCACCTGCTC
GTCTTTTTACGGAGAGATGTTGAAGTACGTCAGGCACAACCCCGGTATCT
GTTCTGCCACAAGAACGAGTACGGCAGAGAGAATTGGGCTCTCTTGCCGC
TTTCATGTCGATCGCTGGAAGTTGTTGCTCACACTTCAGAGTTCTGTAGG
TGTTGCCTTCGTATTCATTGCAAAGTTCGCAGGCTGCTCTGCTCTGCATG
AGGGATGGTGTCGTGGTTCTTCCAGCGCGCACACCTCCTGAAGATGTCGT
TCATTAGGTATTGTCTTTCGATACAATAGTGGGTTGGCATGTTTCCCAAT
AGTGTAAACCTGCATCAACCTGCAACATGCAACGCAACCGGTTGGCGTCG
GCAAGTAAGTGTTGCCGACATCACGATGTCATAAAAGTTGGAGAGAGAAT
GAACGTGCGGGGTTGCTGCCCCTGGCTCACGTTTGTCGTTCACATAAGGA
GGGTTCTTGACAACCACACAACTGAAAACACACGTCCAACTCTTGGTACT
ATTTACTATTTCATCCCCTGCGTAATCATTGCTCGATGGTTCATGAGCGA
AGCTTCAACATACGTGAAGGCAGCCAAATAGCAAACCAAACCAGACTGAC
AGGTAACCCCGAAGGATGTGTTTTTGTTGGGGACGAAAGCGAAACATCCC
ATACCAAGATCGCAGGTTCTTTCCGCTAGTGCGGGTCGATAGTGGCACAC
GGAGCTCTGTGGGTTTATGGAGGGTCATGGTCCTTGGGTGCTGTGGCTAC
TTCGACAACTTGTCACAGGCCGTGTAATGCCCCAAGACCAGCAGGCTATC
GCAGGGCGTGTAGCGTTGCTCGAGTACAAATATCCACGCCGGGGGAAATC
AATGCCGCTTCGATTAGCCATGATTTGTTACCTTAAAGGTCCTTGGGGCA
GTCATCAGGATGTATGTTGCCCACCCACGAGTCGGTGACCACTGGGCGGC
CGGATTTCCCCTTTACCTTTATGCGAGAAAGTGCGTGTTGCGTGTGCTTT
GGCATCCCGTGATTACATACGGGGCTTTGCCCTGTCGTAGTTTCAGGTCT
TGTTATGTTTGGTGGGACCAACAATGGCCTAGTTTTTGGTACAACGCTTT
GCCAACAAACTGAAGAGTACCGTGATGCCTGTGGCGCCTTATCATCCTAT
CAGTGGTCCAATTAGTGCCGTGACGGAGTTGTCCCCAACTCGAATGTGCA
ATGCCTATGATTCTCTGCAGGCGGAGAAGATTGTCCGAGATCAGGTTCAG
GCGTGTGGGCTCACCTGCTACGATATCTTATGGACCTTTCACAGGTTGGA
GGTTACCGTGACGAGAGCAGAGGGCGATGGACCCATTGAGGAAGCAGCAT
ATGTGGATAGCGACAAACTAATGCAGGCCATCAAGTGAGCAAGCATGATA
GGTGACGGTGGTGATTCCGTTGTTCGGTAGCGAGCAAGCGATGTATCCAT
CACGTTGATGAAATAGAAATTGTTGAGGATAAAGGTGGTTTCAGTCCATC
CCTAAATTTACTAGTCATAATAACTGACCTCTGTCAATGAATCAAGTGAA
GACACGCTGTGGCCAATACTTCAGGTAATTTGTGTTCGAAAGTACTGTAT
TCACAGCTCCACCCAGGCAACGACTAGAATGAATGTCTCGCTCATGCCAG
GAGACGTACGCGGAAGTGGTGGTACTACACATGTAGTCCAGTTCTGTAGT
GAGCTAAATCCTCTCTTTGAAAAATTGCATTCCCAACTCAGGGTGCCAGT
TATTTGTGCGTGTTAAGGTTCACGCATGCGCCGGTCCTTTGATGCACTGG
TTAGCTCGGCTACAGGAGTTGGTGATAGCATGCAAAGAGTAATAGCAGCG
TGGTTGTTGTACGATCCCTGATCTATGATTTATTGCGCTCCGTTGATGGT
GTTCTGTGTGCAGGGTTAACGGAATTCCAACTTGGACAATATCGGTGCGG
ATTGTCTTCATATTTGTGACGACTCTAGGTATGCATGTAACGAACAACAC
TTGATATTGGTGTGCAGGGGGGTGAACGCTGCGTTAGAGGCGAGGGAAGA
GGAGTTGTTCGTGTTGGGGCGGCACGAGCTTGTGGTAGCAACGCCCGGAG
CCAAGGACGTCCTCACAACGGACAAGCAGTTCAAGGCCTACAAGGGGTTC
GAAGTCATCGTGAAAGCGTGAGTAGCTGCTCTGTATTCACCTCGAAATTG
GTTGTTTCGAAGGACCTGGGCGGCCACAGAAAATGGCCCTCATTGGCAAC
GCAGCTTACCATTATTTAGTGTTGTTGCAATGATGCGAGACAGTGCGTAA
CGACCGTGTTAAAAGCGACATGCAAGTACGGGCAGCCGTTGTCTCATTCT
GATGTAGACACACACAACTACCAGTCGCTGAGTGCCTGAATGCAAAGGCT
ATGTGTGCATTGATTATGTTTTGCATCCTGCGGCATTCGCTCACTATAAA
CAAGTGGTCCGTGGATGCACGGAACAGAGGCAGACGATATGTTCCGAACT
AAAGAGTCATCGTTGCCTACGAAAACGTCACACAACACACTCTGCTGTGT
CACGCTAAACAACCACGCTGCTGTACAGCACACCACAGGGCGACCGCTCC
TCCCAGTTCAAAAAGTAAGAAGATGTGTCGTGCTGCGTAAACGAACGAAT
GAAAGTAGCTGTCGAAATGCGAGAAATAATAACTTCAATGGGGTTGGTCA
AAAGCGTTTGCCCCGAACCTCTCATTGGCTGGTATGTAGACACAAGCCAT
TCAGGCGTCGAAGGGATGTCCATCCTGTTGGACATTAGAGGGGGCTTACA
TCTGATGGCGGGTGGGAACATTTTACGCACATATTGATCGCACCAATATG
GTGTCGGGAGCTCCTACGGCAGCTGCTTGTTTCCAGGCCGAGACTGCTGA
ACATGGACTCCTCAAACCATTAAGGCAGGCACCAATCAAGCTCAATTTTA
AATGTCAAGTGTTACAAGGCGGCTGTGGGATGACCTCTCACGCCTCGGGG
GAAAAAACTGCGGGGTTCGGAGTTCTTTCGGTTGCACATGATCTTTCAGA
CGATCAGACAACCACAAATGGTTTGTTCCGGTGAAACCAAAATTGTTCCC
CACAAGCACCATGGCGCCAAGACCTTTGCACCGCCGGTAAGAGAGTCCGA
TCGGAGCGTTACCATATTTTGACCCTATTTTGGAACTGACTTAGCCGGTC
GCCTGTCGCTCTAGTCCCATGCTCACTGACGCGGCTGTGACCATGGTCGT
CGCCCGAAACTGCCGCTCGGTGTTCCTTTTCAGAGTGATATACACCTCGT
ATCTGCACGACTCAGACGAATACATACATACCGACGTTGCACGTTTTCAC
AGTCGCCACTTCGCTGGCACGTATCGCTGGCGTAGTTGAGCGCGCAAAAC
CTCCGCAATAGTCGATCGTTACAGTGAACAGGTCAACAGCAGCCGGGAAA
CAGTAGGTATCTCTCCTACCAGTTTCACGACAATTCACCTGAGAGAAAAC
AAATTACATTATTGCTAACTTATCGTGGACTCTGATCGGTGGATCGACAT
GAATCCGATGTGATTTTCTGAAATAACACAGTTTTAGCTTTTCATGTCGC
TGAGCCGCTAACTTTCTGAATTTTTGCGTCGTCTATCACAGGGGAGGACC
ATTCAAGAAGAAGCGCGAGTTGAAAGGAAAACTACTTGAGCGTACTTTCG
ATGAGCTCATGATTATGAAGGCAGGGCGAAAAGTGCGGATTCCTTTGGCA
CTTGTGGACGAGGTCCGCCTTCCTCCGGCGCTCGTCGAAGCCGGAGACGA
GGTTTTTTGAAGCATCGGCTGCAAAGAATGCGTCGTCACCTCTTGAAGAG
CAACGTGTCGCATGGTATATCATGTGCAACGTATCTGGAACCGAGTTTGC
GCGAGTCGTGCGCTGAGAGGCTGAGGTTGGTCGCACAATTATCAACCCTC
ACGCAACGTTTGGGCGCATCACTTGGGAATGGAATATGTTCCTTGTGACT
GACGTACACCCTGCAGTGACATAACATTAGAACAAATCGTGAGAAATCTG
TGTGTTCGGCGGATCGTTTGATTGGAGCGGGTATTTATTATCTTGGTTGC
GAGAAAATGCGATTCCGTCAAGAATATGCAAAACATTTTGAGATAGTTTT
TTTGGTCGAGTGTTGGGTGCACGTTTTTTTTCAGGCCGGTTTTGAACAAA
CCACGCCGAGGAGCTCATCGAGACCTGACTATTTCTTCAGTTGAGTCCTT
TGGGACTAATTACAGAAGCGCATGAGGCGACCCACTCAGAGTTTTGAATT
TTGGGGCCATGTTCACCGGACGAGTTGGACCTGCACCTCTATCAAGTTGA
ATACGCACGAGTGATGGAGGCACGCTTACCGCGTCGCCGAGGCATTTCGT
TTATCCTGCAACAAGGAACGTTTGTACAACTTTGGGCTTGACACCACATA
CATGCAGATAGGTCAGTCATGACGGAACTATTGCCGGCGTTGTGGATATG
AATTTTTGAGCAATAGTCGGTGTTGGGAAAAGATTTGTGTAATCACCCTA
CGTACCTACAGTACTACCCGGTTTTGGTTCAACATAAGGAACTACACGCA
CCCCGTTGTTCCCGTATTATACATCACACATCTTTTGTATCATTCCCTCG
AGCCAGTTCTCCTTGTCCTATTTAGCCTCCTGTGGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14:5810..12446+

>mRNA_Ecto-sp13_S_contig14.3115.1 ID=mRNA_Ecto-sp13_S_contig14.3115.1|Name=mRNA_Ecto-sp13_S_contig14.3115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1095bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14:5810..12446+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCCTACCTTGCGCAGCCGGCCTGGTTGTTGCGGCGTGTCCGTGCGT
TCCTGGTTTCTTGCTGCCGTTACCAGCGCACGATGTGGGTCATCAGGGTA
AACTCTTCGCAAGGCAAGGGTGTGCGGCGACACGTTCAACGAGGGGACGA
GAGGCGACGGCGACTCGGTTATACGTTGGTGGCAAGATATTCGGCGAGGA
TGAGCCTACACCACCCCCGCAGGGCCAACCCGGACTTATCAAGCCAGCCG
TGAAATCCAACCGGAAAGAAGACGAGGACGGTGGAGAAGAAGGCGGTTCG
GACGAGACTGGAACCGGAGAGAAGAGGAAACGGAGGAAACGACGGAAGAA
GTACGACTTCTCGGACGATTTAGCGGCGAGGGAGCAGGACGAAAAGAGAT
TAGCGGAAGAGCTTGCTCGAAAGTTTCCGGATATCGGCCGGGTGAGGGTG
GATAAGTTTGGGAATATTGTTGGAGGTGTCAATCCCTTCGAAGGCACAGA
TGTCAAGCTGGAGGATCAGCCAATACCGGATGATGACGAACAGGATTTCC
CAGAGGTGGCTGGTGTGATTGCAGGAATGGACGATCCCGCGGATGCGCCT
TGGAGGCTGGAGGCGGAGAAGATTGTCCGAGATCAGGTTCAGGCGTGTGG
GCTCACCTGCTACGATATCTTATGGACCTTTCACAGGTTGGAGGTTACCG
TGACGAGAGCAGAGGGCGATGGACCCATTGAGGAAGCAGCATATGTGGAT
AGCGACAAACTAATGCAGGCCATCAAGGGGGTGAACGCTGCGTTAGAGGC
GAGGGAAGAGGAGTTGTTCGTGTTGGGGCGGCACGAGCTTGTGGTAGCAA
CGCCCGGAGCCAAGGACGTCCTCACAACGGACAAGCAGTTCAAGGCCTAC
AAGGGGTTCGAAGTCATCGTGAAAGCGGGAGGACCATTCAAGAAGAAGCG
CGAGTTGAAAGGAAAACTACTTGAGCGTACTTTCGATGAGCTCATGATTA
TGAAGGCAGGGCGAAAAGTGCGGATTCCTTTGGCACTTGTGGACGAGGTC
CGCCTTCCTCCGGCGCTCGTCGAAGCCGGAGACGAGGTTTTTTGA
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