prot_Ecto-sp13_S_contig14.3113.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14.3113.1
Unique Nameprot_Ecto-sp13_S_contig14.3113.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Match: A0A6H5KBR0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR0_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 2.890e-27
Identity = 62/102 (60.78%), Postives = 70/102 (68.63%), Query Frame = 0
Query:    1 MKNWKACGHDSLPVELLNIDDVDEPIVL-----------CKKSNRSNSNNSRGISLLSHASKVLLKVVANRLIDY-----ILPEEQCGFRPGRPTVNMLFVV 86
            +KNWKA GHDSLP ELL IDD DEP VL            KK +RSN NN RGISL+SH  KV +K++ NRL  +     ILPEEQCGFRPGR TV+MLFVV
Sbjct:   69 LKNWKAPGHDSLPAELLKIDD-DEPFVLGHLHTIFVKVLYKKGDRSNCNNYRGISLISHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVV 169          
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Match: A0A6H5J7A9_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7A9_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 7.220e-27
Identity = 64/119 (53.78%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 MKNWKACGHDSLPVELLNIDDVDEPIVL----------------------------CKKSNRSNSNNSRGISLLSHASKVLLKVVANRLIDY-----ILPEEQCGFRPGRPTVNMLFVV 86
            +KNWKA GHDSLP ELL IDD DEP VL                             KK NRSN NN RGISLLSH  KV +K++ NRL  +     ILPEEQCGFRPGR TV+MLFVV
Sbjct:   94 LKNWKAPGHDSLPAELLKIDD-DEPFVLGHLHTILVKVWNREDNPRDWKDTTIKVLYKKGNRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVV 211          
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Match: A0A6H5K5P0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P0_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.000e-26
Identity = 63/119 (52.94%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 MKNWKACGHDSLPVELLNIDDVDEPIVL----------------------------CKKSNRSNSNNSRGISLLSHASKVLLKVVANRLIDY-----ILPEEQCGFRPGRPTVNMLFVV 86
            +KNWKA GHDSLP ELL IDD DEP VL                             KK +RSN NN RGISLLSH  KV +K++ NRL  +     ILPEEQCGFRPGR TV+MLFVV
Sbjct:   94 LKNWKAPGHDSLPAELLKIDD-DEPFVLGHLHTILVKVWNGGDIPREWKNATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVV 211          
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Match: A0A6H5JS58_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS58_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.080e-26
Identity = 63/119 (52.94%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 MKNWKACGHDSLPVELLNIDDVDEPIVL----------------------------CKKSNRSNSNNSRGISLLSHASKVLLKVVANRLIDY-----ILPEEQCGFRPGRPTVNMLFVV 86
            +KNWKA GHDSLP ELL IDD DEP VL                             KK +RSN NN RGISLLSH  KV +K++ NRL  +     ILPEEQCGFRPGR TV+MLFVV
Sbjct:   94 LKNWKAPGHDSLPAELLKIDD-DEPFVLGHLHTILVKVWNGGDIPREWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVV 211          
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Match: A0A6H5JP17_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP17_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.350e-26
Identity = 62/119 (52.10%), Postives = 71/119 (59.66%), Query Frame = 0
Query:    1 MKNWKACGHDSLPVELLNIDDVDEPIVL----------------------------CKKSNRSNSNNSRGISLLSHASKVLLKVVANRLIDY-----ILPEEQCGFRPGRPTVNMLFVV 86
            +KNWKA GHDSLPVELL IDD D+P VL                             KK +RSN NN RGISLLSH SKV +KV+ NRL  +     ILP++ CGFRPGR TV+MLFVV
Sbjct:    4 LKNWKAPGHDSLPVELLKIDD-DKPFVLGHPHTILVKVWNGGDIPREWKAANIKVLYKKGDRSNCNNYRGISLLSHVSKVPIKVITNRLSAFCGANNILPKKNCGFRPGRSTVDMLFVV 121          
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Match: A0A6H5JTH8_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH8_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.880e-26
Identity = 63/119 (52.94%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 MKNWKACGHDSLPVELLNIDDVDEPIVL----------------------------CKKSNRSNSNNSRGISLLSHASKVLLKVVANRLIDY-----ILPEEQCGFRPGRPTVNMLFVV 86
            +KNWKA GHDSLP ELL IDD DEP VL                             KK +RSN NN RGISLLSH  KV +K++ NRL  +     ILPEEQCGFRPGR TV+MLFVV
Sbjct:   79 LKNWKAPGHDSLPAELLKIDD-DEPFVLGHLHTILVKVWNGGDIPREWKDATIKVLYKKGHRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVV 196          
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Match: A0A6H5KRC4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC4_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 5.230e-26
Identity = 63/119 (52.94%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 MKNWKACGHDSLPVELLNIDDVDEPIVL----------------------------CKKSNRSNSNNSRGISLLSHASKVLLKVVANRLIDY-----ILPEEQCGFRPGRPTVNMLFVV 86
            +KNWKA GHDSLP ELL IDD DEP VL                             KK +RSN NN RGISLLSH  KV +K++ NRL  +     ILPEEQCGFRPGR TV+MLFVV
Sbjct:  168 LKNWKAPGHDSLPAELLKIDD-DEPFVLGHLHTILVKVWNGGDIPREWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVV 285          
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Match: A0A6H5KWF9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWF9_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.660e-25
Identity = 60/119 (50.42%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    1 MKNWKACGHDSLPVELLNIDDVDEPIVL----------------------------CKKSNRSNSNNSRGISLLSHASKVLLKVVANRLIDY------ILPEEQCGFRPGRPTVNMLFV 85
            +KNWKA GHDSLP ELL IDD DEP VL                             KK +RSN +N RGISLLSH  KV +K++ NRL  +      ILP+EQCGFRPGR TV+MLFV
Sbjct:   18 LKNWKAPGHDSLPAELLKIDD-DEPFVLGHLHTILVKVWNRGDIPREWKDATIKVLYKKGDRSNCHNYRGISLLSHVGKVPIKIITNRLTAFFCEANNILPKEQCGFRPGRSTVDMLFV 135          
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Match: A0A6H5J8W6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8W6_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 2.230e-25
Identity = 62/119 (52.10%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    1 MKNWKACGHDSLPVELLNIDDVDEPIVL----------------------------CKKSNRSNSNNSRGISLLSHASKVLLKVVANRLIDY-----ILPEEQCGFRPGRPTVNMLFVV 86
            +KNWKA GHDSLP ELL IDD DEP VL                             KK +RSN NN RGISLLSH  KV +K++ NRL  +     ILPEE CGFRPGR TV+MLFVV
Sbjct:   94 LKNWKAPGHDSLPAELLKIDD-DEPFVLGHLHTILVKVWNGGDIPREWKDATIKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEYCGFRPGRSTVDMLFVV 211          
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Match: A0A6H5K556_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K556_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 2.790e-25
Identity = 63/119 (52.94%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 MKNWKACGHDSLPVELLNIDDVDEPIVLC----------------------------KKSNRSNSNNSRGISLLSHASKVLLKVVANRLIDY-----ILPEEQCGFRPGRPTVNMLFVV 86
            +KNWKA GHDSLP ELL IDD DEP VL                             KK +RSN NN RGISLLSH  KV +K++ NRL  +     ILPEEQCGFRPGR TV+MLFVV
Sbjct:  235 LKNWKAPGHDSLPAELLKIDD-DEPFVLAHLHTILVKVWNGGDISREWKDATVKVLYKKGDRSNCNNYRGISLLSHVGKVPIKIITNRLSAFCEANNILPEEQCGFRPGRSTVDMLFVV 352          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14.3113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBR0_9PHAE2.890e-2760.78Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J7A9_9PHAE7.220e-2753.78Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K5P0_9PHAE1.000e-2652.94Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JS58_9PHAE1.080e-2652.94Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JP17_9PHAE1.350e-2652.10Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JTH8_9PHAE2.880e-2652.94Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KRC4_9PHAE5.230e-2652.94Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KWF9_9PHAE1.660e-2550.42Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J8W6_9PHAE2.230e-2552.10Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K556_9PHAE2.790e-2552.94Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14contigEcto-sp13_S_contig14:1731..2075 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14.3113.1mRNA_Ecto-sp13_S_contig14.3113.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14 561..2191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14.3113.1 ID=prot_Ecto-sp13_S_contig14.3113.1|Name=mRNA_Ecto-sp13_S_contig14.3113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
MKNWKACGHDSLPVELLNIDDVDEPIVLCKKSNRSNSNNSRGISLLSHAS
KVLLKVVANRLIDYILPEEQCGFRPGRPTVNMLFVV*
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