prot_Ecto-sp13_S_contig10307.311.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10307.311.1
Unique Nameprot_Ecto-sp13_S_contig10307.311.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length272
Homology
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Match: A0A6H5JIN2_9PHAE (Transket_pyr domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIN2_9PHAE)

HSP 1 Score: 436 bits (1121), Expect = 3.820e-150
Identity = 235/274 (85.77%), Postives = 239/274 (87.23%), Query Frame = 0
Query:    1 MSPSVARCPRSLAAGSAGLRNAVLSAASASTTGSRMRSASDSLLLRPPRSNREPRRQRWTAASNGGALARPRTLQPPGLSNRRASSVVDNDIDEDDNSVAAGARGTKGAPASAGPGPG--CGTRYAEGPSTRMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 272
            MS SV RCPRSLAAGSAGLRNAVLS ASASTTGSRMRSASDSLLLRP RSNRE RRQRWTAASNGGALARPRTL P G  NRRASSV+D+DIDE                          CGTRYAEGPSTRMNLFTAVNAGLRTAMETD+TAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSG+QFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV
Sbjct:    1 MSRSVLRCPRSLAAGSAGLRNAVLSTASASTTGSRMRSASDSLLLRPLRSNRESRRQRWTAASNGGALARPRTLHPTGFPNRRASSVIDSDIDEXXXXXXXXXXXXXXXXXXXXXXXXXXCGTRYAEGPSTRMNLFTAVNAGLRTAMETDETAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 274          
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Match: A0A812TXL3_9DINO (BkdB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TXL3_9DINO)

HSP 1 Score: 262 bits (669), Expect = 6.020e-83
Identity = 121/148 (81.76%), Postives = 139/148 (93.92%), Query Frame = 0
Query:  125 EGPSTRMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 272
            EGP  +MNLFTA+N G+R A++TDDTA+VFGEDVAFGGVFRC+  LKE+FGP+RVF++ LCEQGIAGFAIGYA+MG+TAIAE+QFADYIFPAFDQIVNEAAK+RYRSGD+FNCGGLT R+P GAVGHGGHYHSQSPE+YFAHTPGLKV
Sbjct:   36 EGPRKKMNLFTAINDGMRVALKTDDTAVVFGEDVAFGGVFRCSVDLKEEFGPERVFNTPLCEQGIAGFAIGYAAMGRTAIAEMQFADYIFPAFDQIVNEAAKYRYRSGDEFNCGGLTFRSPYGAVGHGGHYHSQSPEAYFAHTPGLKV 183          
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Match: A0A7S1C9I4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9I4_9STRA)

HSP 1 Score: 254 bits (648), Expect = 4.980e-80
Identity = 119/149 (79.87%), Postives = 137/149 (91.95%), Query Frame = 0
Query:  124 AEGPSTRMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 272
            A+GP  RMN+FTA+N  LR A+ TDDTA++FGEDVAFGGVFRC+  L+E+FG DRVF++ LCEQGIAGFAIGYA+MG+TAIAE+QFADYIFPAFDQIVNEAAK+RYRSGDQ++CG LTIRAP GAVGHGGHYHSQSPE+YFAHTPGLKV
Sbjct:   17 ADGPVQRMNMFTAINDALRVALRTDDTAVLFGEDVAFGGVFRCSVDLREEFGEDRVFNTPLCEQGIAGFAIGYAAMGRTAIAEMQFADYIFPAFDQIVNEAAKYRYRSGDQYDCGPLTIRAPYGAVGHGGHYHSQSPEAYFAHTPGLKV 165          
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Match: A0A662Y718_9STRA (Transket_pyr domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y718_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.360e-78
Identity = 121/145 (83.45%), Postives = 130/145 (89.66%), Query Frame = 0
Query:  128 STRMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 272
            +T MNLFTA+N  +R AMETD TA+VFGEDVAFGGVFRC+  LKEQFG DRVF+S LCEQ IAGFAIGYAS G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG +FNCG LT RAP GAVGHGGHYHSQSPE+YFAHTPGLKV
Sbjct:   49 TTPMNLFTAINDAMRVAMETDPTAVVFGEDVAFGGVFRCSVDLKEQFGGDRVFNSPLCEQAIAGFAIGYASTGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGGEFNCGKLTFRAPYGAVGHGGHYHSQSPEAYFAHTPGLKV 193          
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Match: A0A5A8C5T5_CAFRO (Transket_pyr domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C5T5_CAFRO)

HSP 1 Score: 251 bits (641), Expect = 1.390e-78
Identity = 116/147 (78.91%), Postives = 135/147 (91.84%), Query Frame = 0
Query:  126 GPSTRMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 272
            GP+TRMNLFTA+N G+R AM+TDD  I+FGEDVAFGGVFRC+ GL+E+FG +RVF++ LCEQGIAGFAIGYA+ G++ IAE+QFADYIFPAFDQIVNEAAKFRYRSG QF+CGG+T R+PCGAVGHGG YHSQSPE+YFAHTPGLKV
Sbjct:   48 GPATRMNLFTAINQGMRAAMQTDDDCILFGEDVAFGGVFRCSMGLREEFGGERVFNTPLCEQGIAGFAIGYAATGRSCIAELQFADYIFPAFDQIVNEAAKFRYRSGGQFDCGGVTFRSPCGAVGHGGLYHSQSPEAYFAHTPGLKV 194          
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Match: A0A067CKD9_SAPPC (2-oxoisovalerate dehydrogenase subunit beta n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKD9_SAPPC)

HSP 1 Score: 249 bits (637), Expect = 2.280e-78
Identity = 120/143 (83.92%), Postives = 131/143 (91.61%), Query Frame = 0
Query:  130 RMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 272
            RMN+FTA+N  +R AMETD TA+VFGEDVAFGGVFRCT  LKE+FG DRVF+S LCEQGIAGFAIGYAS+G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG+QF+CG LT RAP GAVGHG HYHSQSPE+YFAHTPGLKV
Sbjct:   29 RMNMFTALNDAMRVAMETDPTAVVFGEDVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKV 171          
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Match: A0A1V9Z8A2_9STRA (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z8A2_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.090e-77
Identity = 119/143 (83.22%), Postives = 130/143 (90.91%), Query Frame = 0
Query:  130 RMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 272
            RMN+FTA+N  +R AMETD TA+VFGEDVAFGGVFRCT  LKE+FG DRVF+S LCEQGIAGFAIGYAS+G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG+QF+CG LT R P GAVGHG HYHSQSPE+YFAHTPGLKV
Sbjct:   29 RMNMFTALNDAMRVAMETDPTAVVFGEDVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRTPYGAVGHGAHYHSQSPEAYFAHTPGLKV 171          
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Match: A0A418BXW7_9STRA (Transket_pyr domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BXW7_9STRA)

HSP 1 Score: 246 bits (629), Expect = 1.250e-77
Identity = 119/143 (83.22%), Postives = 130/143 (90.91%), Query Frame = 0
Query:  130 RMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 272
            RMN+FTA+N  +R AMETD TA VFGEDVAFGGVFRCT  L+EQFG DRVF+S LCEQGIAGFAIGYAS+G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG+Q++CG LT RAP GAVGHG HYHSQSPE+YFAHTPGLKV
Sbjct:   20 RMNMFTALNDAMRVAMETDPTAAVFGEDVAFGGVFRCTVDLREQFGEDRVFNSPLCEQGIAGFAIGYASVGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQWDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKV 162          
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Match: A0A3F2S123_9STRA (Transket_pyr domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S123_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.280e-77
Identity = 118/145 (81.38%), Postives = 132/145 (91.03%), Query Frame = 0
Query:  128 STRMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 272
            +TRMNLFTA+N  +R AM+TD +A++FGEDVAFGGVFRC+  L+EQFG DRVF+S LCEQGIAGFAIGYAS G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG +F+CG LT RAP GAVGHGGHYHSQSPE+YFAHTPGLKV
Sbjct:   44 TTRMNLFTAINDAMRVAMDTDPSAVLFGEDVAFGGVFRCSVDLREQFGSDRVFNSPLCEQGIAGFAIGYASTGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGSEFDCGKLTFRAPYGAVGHGGHYHSQSPEAYFAHTPGLKV 188          
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Match: A0A1V9YPY9_9STRA (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPY9_9STRA)

HSP 1 Score: 248 bits (632), Expect = 1.460e-77
Identity = 118/143 (82.52%), Postives = 131/143 (91.61%), Query Frame = 0
Query:  130 RMNLFTAVNAGLRTAMETDDTAIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMGKTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVGHGGHYHSQSPESYFAHTPGLKV 272
            RMN+FTA+N  +R AMETD +A++FGEDVAFGGVFRCT  LKE+FG DRVF+S LCEQGIAGFAIGYAS+G+TAIAEIQFADYIFPAFDQIVNEAAKFRYRSG+QF+CG LT RAP GAVGHG HYHSQSPE+YFAHTPGLKV
Sbjct:   27 RMNMFTALNDAMRVAMETDPSAVIFGEDVAFGGVFRCTVDLKEKFGEDRVFNSPLCEQGIAGFAIGYASIGRTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFDCGKLTFRAPYGAVGHGAHYHSQSPEAYFAHTPGLKV 169          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10307.311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIN2_9PHAE3.820e-15085.77Transket_pyr domain-containing protein n=2 Tax=Ect... [more]
A0A812TXL3_9DINO6.020e-8381.76BkdB protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S1C9I4_9STRA4.980e-8079.87Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A662Y718_9STRA1.360e-7883.45Transket_pyr domain-containing protein n=1 Tax=Not... [more]
A0A5A8C5T5_CAFRO1.390e-7878.91Transket_pyr domain-containing protein n=2 Tax=Caf... [more]
A0A067CKD9_SAPPC2.280e-7883.922-oxoisovalerate dehydrogenase subunit beta n=2 Ta... [more]
A0A1V9Z8A2_9STRA1.090e-7783.222-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]
A0A418BXW7_9STRA1.250e-7783.22Transket_pyr domain-containing protein n=4 Tax=Aph... [more]
A0A3F2S123_9STRA1.280e-7781.38Transket_pyr domain-containing protein n=3 Tax=Phy... [more]
A0A1V9YPY9_9STRA1.460e-7782.522-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005475Transketolase-like, pyrimidine-binding domainSMARTSM00861Transket_pyr_3coord: 131..272
e-value: 5.6E-28
score: 109.0
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 132..272
e-value: 3.2E-32
score: 111.6
NoneNo IPR availableGENE3D3.40.50.970coord: 128..272
e-value: 1.1E-64
score: 219.2
NoneNo IPR availablePANTHERPTHR42980FAMILY NOT NAMEDcoord: 125..272
NoneNo IPR availablePANTHERPTHR42980:SF12-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA, MITOCHONDRIALcoord: 125..272
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 128..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10307contigEcto-sp13_S_contig10307:3172..5569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10307.311.1mRNA_Ecto-sp13_S_contig10307.311.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10307 3172..5569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10307.311.1 ID=prot_Ecto-sp13_S_contig10307.311.1|Name=mRNA_Ecto-sp13_S_contig10307.311.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=272bp
MSPSVARCPRSLAAGSAGLRNAVLSAASASTTGSRMRSASDSLLLRPPRS
NREPRRQRWTAASNGGALARPRTLQPPGLSNRRASSVVDNDIDEDDNSVA
AGARGTKGAPASAGPGPGCGTRYAEGPSTRMNLFTAVNAGLRTAMETDDT
AIVFGEDVAFGGVFRCTGGLKEQFGPDRVFDSTLCEQGIAGFAIGYASMG
KTAIAEIQFADYIFPAFDQIVNEAAKFRYRSGDQFNCGGLTIRAPCGAVG
HGGHYHSQSPESYFAHTPGLKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005475Transketolase-like_Pyr-bd
IPR029061THDP-binding