prot_Ecto-sp13_S_contig1399.3106.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1399.3106.1
Unique Nameprot_Ecto-sp13_S_contig1399.3106.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length163
Homology
BLAST of mRNA_Ecto-sp13_S_contig1399.3106.1 vs. uniprot
Match: D7FVJ7_ECTSI (PFtsY, plastid signal recognition particle receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ7_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 2.670e-55
Identity = 148/165 (89.70%), Postives = 150/165 (90.91%), Query Frame = 0
Query:    1 MMMLALGTALCGAASFPHAHAFAPSAMLSSAASNAFISRRGFVSSSTESVEERLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG--MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDRRAAADMGGLLNAKFSDGLAQSRLRFVGD 163
            MMMLALGTALCGAASFPHAHAFAPSAMLSSAASNAF+SRRGFVSSSTESVE+RLTQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDR          NAKFSDGLAQSRLRFVGD
Sbjct:    1 MMMLALGTALCGAASFPHAHAFAPSAMLSSAASNAFVSRRGFVSSSTESVEKRLTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDR----------NAKFSDGLAQSRLRFVGD 155          
BLAST of mRNA_Ecto-sp13_S_contig1399.3106.1 vs. uniprot
Match: A0A6H5KTL2_9PHAE (SRP54 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL2_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.510e-22
Identity = 58/73 (79.45%), Postives = 58/73 (79.45%), Query Frame = 0
Query:   91 MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDRRAAADMGGLLNAKFSDGLAQSRLRFVGD 163
            MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSA               NAKFSDGLAQSRLRFVGD
Sbjct:    1 MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSA---------------NAKFSDGLAQSRLRFVGD 58          
BLAST of mRNA_Ecto-sp13_S_contig1399.3106.1 vs. uniprot
Match: A0A4D9DHK9_9STRA (SRP54 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHK9_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.780e-9
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 0
Query:   92 VMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDRRAAADMGGLLNAKFSDGLAQSRLRFVGD 163
            +M+FDFI+KRA+EG++Q QN+ T    G+  EAL +T++YVK +R   D   L  AK  +GLA+SR R +GD
Sbjct:   73 MMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVK-KRQEIDAENL--AKLQEGLAKSRQRLMGD 141          
BLAST of mRNA_Ecto-sp13_S_contig1399.3106.1 vs. uniprot
Match: W7U0S2_9STRA (Signal recognition particle-docking protein FtsY n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0S2_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.150e-9
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 0
Query:   92 VMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDRRAAADMGGLLNAKFSDGLAQSRLRFVGD 163
            +M+FDFI+KRA+EG++Q QN+ T    G+  EAL +T++YVK +R   D   L  AK  +GLA+SR R +GD
Sbjct:   73 MMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVK-KRQEIDAENL--AKLQEGLAKSRQRLMGD 141          
BLAST of mRNA_Ecto-sp13_S_contig1399.3106.1 vs. uniprot
Match: A0A7S2USP8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USP8_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 7.930e-6
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0
Query:   93 MLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKD 134
            M+FDFI+KRAQEGVEQ  N+   A  G+L +ALKET+ YVK+
Sbjct:   58 MVFDFIRKRAQEGVEQVANIAEKAAEGKLADALKETNEYVKE 99          
BLAST of mRNA_Ecto-sp13_S_contig1399.3106.1 vs. uniprot
Match: A0A7S0GH49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GH49_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 8.840e-6
Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   94 LFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDRRAAADMGGLLNAKFSDGLAQSRLRFVGD 163
            +FDF KKRAQEG+EQ  +L +A   G+L E L++ ++Y ++           N  F++GLA+SR R + D
Sbjct:   52 VFDFFKKRAQEGIEQLGDLASATAQGKLGEGLQKAASYTQET----------NQAFAEGLAKSRTRLLYD 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1399.3106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FVJ7_ECTSI2.670e-5589.70PFtsY, plastid signal recognition particle recepto... [more]
A0A6H5KTL2_9PHAE1.510e-2279.45SRP54 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A4D9DHK9_9STRA2.780e-948.61SRP54 domain-containing protein n=1 Tax=Nannochlor... [more]
W7U0S2_9STRA3.150e-948.61Signal recognition particle-docking protein FtsY n... [more]
A0A7S2USP8_9STRA7.930e-661.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0GH49_9STRA8.840e-640.00Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..163
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.521

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1399contigEcto-sp13_S_contig1399:2..1505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1399.3106.1mRNA_Ecto-sp13_S_contig1399.3106.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1399 2..1505 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1399.3106.1 ID=prot_Ecto-sp13_S_contig1399.3106.1|Name=mRNA_Ecto-sp13_S_contig1399.3106.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
MMMLALGTALCGAASFPHAHAFAPSAMLSSAASNAFISRRGFVSSSTESV
EERLTQAAAASGNAATRSTAAATTQRRRRQQQGGGSGGSGMVMLFDFIKK
RAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDRRAAADMGGLLNAKFS
DGLAQSRLRFVGD
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