mRNA_Ecto-sp13_S_contig1397.3094.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig1397.3094.1
Unique Name	mRNA_Ecto-sp13_S_contig1397.3094.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1397.3094.1 vs. uniprot
Match: D8LHA7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA7_ECTSI)

HSP 1 Score: 748 bits (1930), Expect = 8.070e-268
Identity = 378/428 (88.32%), Postives = 394/428 (92.06%), Query Frame = 1

Query:    1 MRAPPANVPQQPPAPSPLVASKWATLRESQREAKVPVALFVLCKTVVEDDQGALYLNATAVQRVPLETTRPTPPKDQLEQDLLFHMKVKGPNAGGGITSRRRSVEDVRGRSQHTVMVCETLDLKTVPLDVRNYWNWFPFRMLKATIDLELQAKNVDVGRTKVLFCPDLCASNIKDNVAKVQKRGFLSRSSKLTFLQEEPVVHIAQDRRFKEGLEQGVKDGHKQQAETYQADVAAGRAPTVADPDDNLFVTYPLMRLTFYLYEPPAKVMFNIVGPLFLILYLMLMNFNEFYGLRNVWGDGCRGEERDSDYLANGIGIAIAAAFVVPAIRADRMKSSYISYT-DDLMAVAFLLGLALSTTPYCRLAMSGCFVSFLVVVSAVVASVRHFFKCKHLRKTVGQHPPVMVEASSKEVKAAGSEFNMSEWFHASV 1281
            MRAPPANVPQQ PAP PLVASKWATLR SQ EAKVPVALFVLCKTVVEDDQGALYLNAT VQRVPLETTRP PP+DQLE+DLLF MKVKGP+AGGGITSRRRSVEDVRGRSQ TVMVCETLDLKT PLDVR +WNWFPFR+LKATIDLELQAKNVDVGRTKVLFCPDLCASN KDNVAKVQ RG LSRSSKLTFLQE+P+VHI QDRRFK+ LEQ VKDGHKQQAETYQADV AG  PTVADPDDNLFVTYPLMRLTFYLYEPPAK MF IVGPLFL++YLMLMNFNEFYGLRN+W DGC GEERDSDYLANGIGIAI AAFVVPAIRADRMKS YIS+T DDLMAVAFL+GLALST+PYC  A+SGCFVSFLVVVSAVVASVRH+FKCKHLRKTV Q PPV VE SSKEVKA  SEFNMSEWFHASV
Sbjct:    1 MRAPPANVPQQRPAPPPLVASKWATLRGSQLEAKVPVALFVLCKTVVEDDQGALYLNATVVQRVPLETTRPMPPQDQLEKDLLFEMKVKGPSAGGGITSRRRSVEDVRGRSQPTVMVCETLDLKTAPLDVRQHWNWFPFRILKATIDLELQAKNVDVGRTKVLFCPDLCASNKKDNVAKVQTRGSLSRSSKLTFLQEQPIVHIVQDRRFKKNLEQAVKDGHKQQAETYQADVEAGLPPTVADPDDNLFVTYPLMRLTFYLYEPPAKAMFKIVGPLFLVMYLMLMNFNEFYGLRNIWDDGCPGEERDSDYLANGIGIAITAAFVVPAIRADRMKSPYISFTRDDLMAVAFLIGLALSTSPYCHWAISGCFVSFLVVVSAVVASVRHYFKCKHLRKTVKQRPPVTVEVSSKEVKATSSEFNMSEWFHASV 428

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BLAST of mRNA_Ecto-sp13_S_contig1397.3094.1 vs. uniprot
Match: A0A6H5JJB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJB2_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 7.830e-130
Identity = 212/303 (69.97%), Postives = 229/303 (75.58%), Query Frame = 1

Query:  478 TKVLFCPDLCASNIKDNVAKVQKRGFLSRSSKLTFLQEEPVVHI--AQD-----------------------------------------------RRFKEGLEQGVKDGHKQQAETYQADVAAGRAPTVADPDDNLFVTYPLMRLTFYLYEPPAKVMFNIVGPLFLILYLMLMNFNEFYGLRNVWGDGCRGEERDSDYLANGIGIAIAAAFVVPAIRADRMKSSYISYT-DDLMAVAFLLGLALSTTPYCRLAMSGCFVSFLVVVSAVVASVRHFFKCKHLRKTVGQHPPVMVEASSKEVKA 1236
            TKVLFCPDLCASN+ DNVAKVQ RG LSRSSKLTFLQE+P+VH+   QD                                               +RFK+GLEQ V DGHKQQAETYQADV A RAPTVADPDD++FVTYPLMRLTFYLYEPPAK M+ IVGPLFL+LYLMLMNFNEFYGLRN+W DGC   +RDSDYLANGIGIAI AAFVVPAIRADRMKS YIS+T DDL AV FLLGLALST+ YC  A+SGCFVSFLVVVSAVVASVRH+FKCKH+RKTV Q PPVMVEASS EVKA
Sbjct:   29 TKVLFCPDLCASNVTDNVAKVQTRGSLSRSSKLTFLQEQPIVHVRNVQDTAPRISLHALLDKGITACGTFRCYSTPRLANIVGDVKRGIIAVDLNAQRFKKGLEQAVMDGHKQQAETYQADVEASRAPTVADPDDDVFVTYPLMRLTFYLYEPPAKAMYKIVGPLFLVLYLMLMNFNEFYGLRNIWDDGCPRGKRDSDYLANGIGIAITAAFVVPAIRADRMKSPYISFTRDDLTAVTFLLGLALSTSSYCHWAISGCFVSFLVVVSAVVASVRHYFKCKHMRKTVEQRPPVMVEASSTEVKA 331

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BLAST of mRNA_Ecto-sp13_S_contig1397.3094.1 vs. uniprot
Match: D7FKB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB9_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 6.800e-77
Identity = 173/441 (39.23%), Postives = 242/441 (54.88%), Query Frame = 1

Query:   55 VASKWATLRESQREAKVPVALFVLCKTVVEDDQGALYLNATAVQRVPLET---------TRPTPPKDQLEQDLLFHMKVKGPNAGGGITSRRRSVEDVRGRSQH------TVMVC-ETLDLKTVPLDVRNYWNWFPFRMLKATIDLELQA--KNVDVGRTKVLFCPDLCASNIKD-----------NVAKVQKRGFLSRSSKLTFLQEEPVVHIAQDRRFKEGLEQGVKDGHKQQAETYQADVAAGRAPTVADPDDNLFVTYPLMRLTFYLYEPPAKVMFNIVGPLFLILYLMLMNFNEFYGLRN-VWGDGCRGEERDS---DYLANGIGIAIAAAFVVPAIRADRMKSSYISYT-DDLMAVAFLLGLALSTTPYCRLAMSGCFVSFLVVVSAVVASVRHFFKCKHLRKTVGQHP---PVMVEASSKEVKAAGSEFNMSEW 1266
            V + W  L +++++  VP +LFV+CKTVVEDD G L+LN T VQRV ++          T       +LE  LLF + +KGP  GG I  R   ++D R  S        TV +C +TLDL + PLDVR +WN FP R+L+ TI+LELQ+  ++ D G  K+L CPDL    + D           N+ +++    LSR  +L FL+E PVV +  + R K+G+                      RA   A  D+NL + YP + L F+LYEP +K +F I+GPL L+L LMLMNF EF+G    V  + C  +       DYLANGIGI +AA F +P+IR   +KS  IS+  DD MAVAFL+GLALS    CR+A+ G  +S +VVV A+++ V   F+ + LRK   + P     + +   K+ K    EF+   W
Sbjct:   31 VEADWEKLEQTEQDFIVPASLFVMCKTVVEDDGGGLFLNGTLVQRVLVKNVPTISFSDGTIDAATHSKLES-LLFPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDLISAPLDVRQHWNTFPCRILEGTIELELQSSFRHEDFGSKKILLCPDLLRPVLDDLSGKKLQDRLENIIRIKPSSGLSRLRRLAFLREVPVVELCYEIRLKKGVR---------------------RADDEAGLDNNLLIRYPQLTLRFWLYEPISKAVFKILGPLALVLALMLMNFQEFFGFSAAVQSNDCLEQPASDTYRDYLANGIGIVLAAFFAIPSIREGNIKSPGISFKRDDFMAVAFLIGLALSNARQCRVALVGILLSCVVVVWALISFVWFMFELRGLRKRAEREPLRVNKVTKDKKKKAKPRAVEFDKKWW 449

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BLAST of mRNA_Ecto-sp13_S_contig1397.3094.1 vs. uniprot
Match: D8LHA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA5_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 2.950e-51
Identity = 117/235 (49.79%), Postives = 143/235 (60.85%), Query Frame = 1

Query:  607 IAQDRRFKEGLEQGVKDGHKQQAETYQADVAAGRAPTVADPDDNLFVTYPLMRLTFYLYEPPAKVMFNIVGPLFLILYLMLMNFNEFYGLRNVWGDGCRGEERDSDYLANGIGIAIAAAFVVP--AIRADRMKSSYISY--TDDLMAVAFLLGLALSTTPYCRLAMSGCFVSFLVVVSAVVASVRHFFKCKHLRKTVGQHPPVMVEASSKEVKAAGSEFNMSEWFHASV*ARGSC 1299
            + QD R K+GL Q VKDGH QQ ETYQADV AGRAP VA+PD+NLFV+ P MRL FYLYEP   V+F I  PL L+L LMLMNF+E YG  +     C  EERD  YLAN IGI I AAFV+P  A R + +KS  I     ++LM   FL GLAL+T   C +   G  ++  V VS V  ++   + C+ L+K      P +VEAS K V    S F++  W  ASV   GSC
Sbjct:   35 LVQDTRLKKGLTQDVKDGHNQQLETYQADVEAGRAPRVANPDENLFVSCPRMRLIFYLYEPVLNVLFKIGVPLILVLVLMLMNFHENYGPLDDTLGTCPSEERDPGYLANAIGIVITAAFVIPELACRKELVKSPNIRCFSVNELMPALFLAGLALATVRKCLVVSLGILLNCWVPVSMVFGALLQLYTCRKLKKETATSVPQVVEAS-KNV----SNFDIDRWRRASV--EGSC 262

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BLAST of mRNA_Ecto-sp13_S_contig1397.3094.1 vs. uniprot
Match: D8LHA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA6_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 1.850e-34
Identity = 83/137 (60.58%), Postives = 93/137 (67.88%), Query Frame = 1

Query:    1 MRAPPANVPQQPPAPSPLVASKWATLRESQREAKVPVALFVLCKTVVEDDQGALYLNATAVQRVPLETTRPTPPKDQLEQDLLFHMKV-KGPNAGGGITSRRRSVEDVRGRSQHTVMVCETLDLKTVPLDVRNYWNW 408
            M AP A+V Q P  PS  V S    LR S  E +VPV L V+CKTV EDDQGA+ LNAT VQRV LE   P PP +QLE DLLF M+V +GP AGG I SRRR+VEDV G     VMV E LDLK VPLD+R +WNW
Sbjct:    1 MSAPHAHV-QPPTTPSRDVTSNLDALRSSLEEKEVPVPLSVVCKTVGEDDQGAICLNATTVQRVLLEPILPMPPPEQLENDLLFGMRVNEGPIAGGEIISRRRNVEDVGG----CVMVREILDLKNVPLDIRLHWNW 132

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BLAST of mRNA_Ecto-sp13_S_contig1397.3094.1 vs. uniprot
Match: A0A6H5JJ39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ39_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 9.660e-24
Identity = 82/214 (38.32%), Postives = 107/214 (50.00%), Query Frame = 1

Query:  607 IAQDRRFKEGLEQGVKDGHKQQAETYQADVAAGRAPTVADPDDNLFVTYPLMRLTFYLYEPPAKVMFNIVGPLFLILYLMLMNFNEFYG-LRNVWGDGCRGEERDSDYLANGIGIAIAAAFVVP--AIRADRMKSSYISYT-----DDLMAVAFLLGLALSTTPYCRLAMSGCFVSFLVVVSAVVASVRHFFKCKHLRKTVGQHPPVMVEASSK 1224
            + Q+ R K+GL Q VKDGH QQ ETYQ DV  GR P+V +PDDNLFVT P MRL                           MNF++ +G L N+    C  EE D +YLAN  G AI AAF VP  A R + ++S  I +      ++ M   F LGL L+T   C  A  G  ++  V+ + VV ++   +    L K      P +VEAS K
Sbjct:   28 LVQETRLKKGLAQEVKDGHNQQVETYQEDVKTGRRPSVDNPDDNLFVTCPRMRL---------------------------MNFDQSHGSLDNLVT--CPSEEPDPNYLANANGTAITAAFAVPELACRKELVRSPTIRWCSLFSLNEFMPAIFRLGLVLATWQKCHAAPVGILLNCAVLTNMVVGALLQLYTRWKLIKETSTSVPKVVEASKK 212

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BLAST of mRNA_Ecto-sp13_S_contig1397.3094.1 vs. uniprot
Match: A0A6H5JLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS3_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.290e-18
Identity = 61/108 (56.48%), Postives = 71/108 (65.74%), Query Frame = 1

Query:  100 KVPVALFVLCKTVVEDDQGALYLNATAVQRVPLETTRPTPPKDQLE----QDLLFHMKV-KGPNAGGGITSRRRSVEDVRGRSQHTVMVCETLDLKTVPLDVRNYWNW 408
            +VPV L +L KTV EDDQGA+YLNAT VQ V LE   P    +QLE    QDLLF M+V +GP AGG I S  +SVE VRG     VMV ETL+LK +PLDV    +W
Sbjct:   15 EVPVPLSLLWKTVGEDDQGAIYLNATVVQSVLLE---PATTPEQLEKYRPQDLLFEMRVNEGPIAGGEIGSGIKSVEGVRG----CVMVHETLELKNIPLDVCLQKSW 115

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1397.3094.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1397.3094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
D8LHA7_ECTSI	8.070e-268	88.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JJB2_9PHAE	7.830e-130	69.97	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FKB9_ECTSI	6.800e-77	39.23	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D8LHA5_ECTSI	2.950e-51	49.79	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LHA6_ECTSI	1.850e-34	60.58	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JJ39_9PHAE	9.660e-24	38.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JLS3_9PHAE	2.290e-18	56.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1397	contig	Ecto-sp13_S_contig1397:580..9810 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	1840
Hectar predicted targeting category	other localisation
Exons	6
Cds size	1284

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1397.3094.1	prot_Ecto-sp13_S_contig1397.3094.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig1397 580..9254 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462745.4385629-CDS-Ecto-sp13_S_contig1397:579..986	1681462745.4385629-CDS-Ecto-sp13_S_contig1397:579..986	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1397 580..986 +
1681462745.4481795-CDS-Ecto-sp13_S_contig1397:5747..5946	1681462745.4481795-CDS-Ecto-sp13_S_contig1397:5747..5946	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1397 5748..5946 +
1681462745.458099-CDS-Ecto-sp13_S_contig1397:7157..7400	1681462745.458099-CDS-Ecto-sp13_S_contig1397:7157..7400	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1397 7158..7400 +
1681462745.5289826-CDS-Ecto-sp13_S_contig1397:7780..7944	1681462745.5289826-CDS-Ecto-sp13_S_contig1397:7780..7944	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1397 7781..7944 +
1681462745.5459526-CDS-Ecto-sp13_S_contig1397:8551..8777	1681462745.5459526-CDS-Ecto-sp13_S_contig1397:8551..8777	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1397 8552..8777 +
1681462745.554367-CDS-Ecto-sp13_S_contig1397:9209..9254	1681462745.554367-CDS-Ecto-sp13_S_contig1397:9209..9254	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1397 9210..9254 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462745.5628595-UTR-Ecto-sp13_S_contig1397:9254..9810	1681462745.5628595-UTR-Ecto-sp13_S_contig1397:9254..9810	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig1397 9255..9810 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig1397:580..9810+
coding sequence from alignment at Ecto-sp13_S_contig1397:580..9810+

protein sequence of mRNA_Ecto-sp13_S_contig1397.3094.1

>prot_Ecto-sp13_S_contig1397.3094.1 ID=prot_Ecto-sp13_S_contig1397.3094.1|Name=mRNA_Ecto-sp13_S_contig1397.3094.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=428bp
MRAPPANVPQQPPAPSPLVASKWATLRESQREAKVPVALFVLCKTVVEDD
QGALYLNATAVQRVPLETTRPTPPKDQLEQDLLFHMKVKGPNAGGGITSR
RRSVEDVRGRSQHTVMVCETLDLKTVPLDVRNYWNWFPFRMLKATIDLEL
QAKNVDVGRTKVLFCPDLCASNIKDNVAKVQKRGFLSRSSKLTFLQEEPV
VHIAQDRRFKEGLEQGVKDGHKQQAETYQADVAAGRAPTVADPDDNLFVT
YPLMRLTFYLYEPPAKVMFNIVGPLFLILYLMLMNFNEFYGLRNVWGDGC
RGEERDSDYLANGIGIAIAAAFVVPAIRADRMKSSYISYTDDLMAVAFLL
GLALSTTPYCRLAMSGCFVSFLVVVSAVVASVRHFFKCKHLRKTVGQHPP
VMVEASSKEVKAAGSEFNMSEWFHASV*

mRNA from alignment at Ecto-sp13_S_contig1397:580..9810+

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig1397.3094.1 ID=mRNA_Ecto-sp13_S_contig1397.3094.1|Name=mRNA_Ecto-sp13_S_contig1397.3094.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9231bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1397:580..9810+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGAGCACCGCCCGCAAATGTACCGCAGCAGCCGCCAGCACCATCTCC
GCTTGTCGCGAGCAAATGGGCCACACTTCGTGAGTCTCAACGCGAGGCGA
AGGTGCCAGTTGCCCTGTTCGTGCTGTGCAAGACGGTGGTAGAAGATGAC
CAGGGCGCTCTCTACCTCAATGCTACAGCCGTTCAGAGGGTCCCGCTCGA
AACCACCAGGCCGACGCCCCCGAAGGACCAGCTAGAACAGGACCTCTTGT
TCCACATGAAGGTCAAAGGCCCTAACGCAGGGGGCGGGATTACGAGCCGA
AGGAGGAGCGTGGAGGACGTTCGTGGGCGGAGTCAGCATACCGTCATGGT
GTGTGAGACTCTAGACTTGAAGACCGTCCCGCTGGATGTTCGCAATTATT
GGAACTGGTGAGAGTTACTCGGAGGGCTTGACGGGACCATTTTTTCCCAT
TTACACAGGGTGCAGGTGTACCTTCCATAACTTCGTGTGGACTTAAACTT
TCAACCACCGATGGTGCCAATTCTTCCCAGCATCTTCCCCAGCATGACAT
ACAAAGACACATTGTAAGATGCCACACGAGTGGCCACCCCACTTTCCCGA
TGACCCTACTCGGTACAGGAGAACAAGGGTTGGTCATCATTCGACGCTTT
ATGTTGTATGCATGTAAGTTTGTTGCTGTGTTCCCCAGGTGGTTGGTCAT
CTGCATAATCCCTATCGGTAGGTTGTGGGTCCAATACTCTGTGCGGAGGA
TCTTTTTCACTACAGCACACAGCTCCCAACACATACATGTGGAGTTAGAT
GCTGGTGTCCCTGTTCTCATCCTACTGTTGGTCTTCCAGCAGCGATCAAT
CTGCACGAATGACTCCCTAGCGGCAGGTTGTCGGTTAGATTTTTTTCCAG
AGGGTTTTTTTCGTGGAGTTCCAGCAACTGTGTCGCTTTTTAGTCGAAAG
CGATCTACTATGCTACGTACGTACGCGGCCGTGCGAAAAAAACACACCGG
CGTCACGGTCGACGAGGGGGTGTCTGAACTCTTCTCGCGTATTCAAAACT
AGTATATGTTGAAAGTATCATCGTCAACTAATAATAACTGCTGCTGTTGT
TATGGGCGTTCTGTTGAACACAACTACAACACAGCAGAATACGATGTCAC
ATATGTACATCATGAGCGTTTCAGTCGCACAAAACATACCGGTTTCAGTA
TTAGTGACGTGGCACACTTGACGTGGTACAAAAAGCTGTTAAGGAAAATA
ACTTCCGTTGAGGAACATATTTCGGGAAAGATGTCTAGGACGACCCACTG
ATGGATGAGGTACATTCGTTCAAACACTGTTTCCTACATAGTCTACATAA
CTTCATCACGTTGATCGGATATACGTTCATAAAACGGTTCTCAGGAATAA
TGCGAGGAAAAGTCCAGAAAAAGAAAAGAGAGGTTCGCGGAACGTTTTTG
GACCACTGCTTTTGGTCTCATGGAACGGCAGTTGGTTCCCGGAAAGTTTC
CGGAACGTTTCCGAACTGGTACCAAGGTTCATCGTTGTTTCGTGCTTCGT
AATAGGTACATTAATCTACGTAAAAAAAAAATGCTGACCAGGCAGAGCGC
ACCCTCCCCCACCGGATCTCACTCGGTTTCCTGCCTAGCTCAACACTACA
AAAGTTGTATGCGTACAGAGCATTCTTTTCTCATCACTTGAATAGATGGA
GTGACTTGCGTCACCAGTCTACTTATCTTGTTTTTAGTGAGGGCCTCTTT
TTAGCAGATCTGACGTTCGCTGATAAGAACACACCGAGCAAGCTAGCACG
AGCCACACCATGGGAACTGTTGTTGACTGCACAGCTTGAGCGGACTCTAC
GCCTTTCGTTTTCAACAAGGCAAACACCGCAAGGGGAAAGATAGGGTCAT
TAAAAAACCCCCAACAAAGTGAAAGGTCCTGTGTGACGTTCGTCTTGTGT
TGACACCGGCGAATACGTCAGGTACATACGCCGAAAGGCCTGTAAACCGG
CGCCAAAATGGATGGGATTCAGCCCATTTCGTCGAAGACCTGTTTTGGAC
ATTTTTTTCCTACGATCGGTACGACCCAAAAAGGGATCTACAAAAAATAC
GACCCGCTCCTTGCGGTGCTCTGGTCGATCCTGTTTACTCATTCCAGTCA
TCGACCTTTACAAGAAGAGACTCTGCAACGGCCGTTCGTCACACAAACAG
ATGCTTTCCCACCGTTTGGTTTTTCGGTGATATCTCCGCGTAGAGTGAAG
CAGCAGCAACTGTAAGCTATCCCCCGCGAGCTGTGTGTATGGTCCGCCTG
TGTGGCGGCTGATAGAGACTACAGGGCGACAGGAGGCACGGAAACTGAGG
TGGCGAGAGTCAACAGCAGGCTCGAAAAATGCCCACCACGCCAGCAACCA
GTTGTTAGTGCTTTTTTGCCTTTGTCGCAACATCATTGGTGTACCGATGA
CCCCTCGCCACTCAAGCAACCACGATGACAAAGGTATCCGCCACGAGCTG
TATGTATCGTCCGTTCTGTGTGGTGGTGGACACCAAGAGGCTGAACGGCG
CCCGGCAGTGGTGAGCGCGAGAGTCGTGGACCAGCGGGAAAAATTACCCG
CCTCGTGTTAAGCAGCTTTTTTTGCTTCAATGCCCATGTCGCAGCTTTTG
TTCACCAATGATCCCTCGCCGCCCACTGAAGCAAAAGCAGCAGAACATAG
GTATTCGCCATGAGCTGTGCGTATGATTCGTCTTCCTTGGTGGTTGACAC
GGACCTTGAGGCTCGGTATGCCCAGAAGTTGTGTTCGCATAGGTTGAAAG
CACACGAAAAATGACCCGCCGCTGCTCCGTCCAGGCTCTCTCGGCTCGTT
TGCCACTTGTTTGCGGCACACATCAGGTTGTCCACCTGGCCCAGCCGCAT
GTCAAAAACAACTGCTACCGCCTGTGTGACCGACTCTATACCAGCCGACA
CAACTCGTGTGACCACCGTCAGAGTTTGCGGGAATCAACTGTCGAGAGAT
TCAAATTTGTAGGTACGAGTCTCTGGTTGTGACCTATAAAGAACATCATT
TTTAGCAGCGACAATCGATCCAACAGTTCCTAACGAGAGGATGGCGTGTC
CGAAGGGTGGTATTTTTTTACCGGTCTTTCTTGGCAAATGAAGACCTCGT
AAGAAGGGGGTTCTTTCGCCAGTGTCTTTTTTTGTGATGGACGAAAGAGA
AATACTATCAACAAAAGGAACCGTAAGAAATGGCCTAAATGCAGGGAACG
ACCGATGAAATCAATAAGGTTGTCGCCGGCAAAGCCCAAATCATCCTCTA
CGGCAGCCCCGTCCACCCAGCAAGCCCCGCTCTGACTAGAAGAGCGACCC
TGCCTGGCCTTTCCCTGGAAAAGACTGCCACATCTCGCTTACCCTCGTAG
AAAGGAAAGATAATCGAGGTTACTTTGCACTGCCGTGCCAAGAAGACACG
TGAAAGGACACCGGATTATCAAGAATGGTGCACGGTTCTTCGGCTCTTGA
ACATTAACAACCCGAACATGTGTGTCAGCTCTGCTTGACAACTGTTGAAG
AGACTCTCATCATTTGGTGTTCCGATCGGCGTAAAGGTCTCGACTTACTA
AATGTTCTCTCCTCCTTTGCTCATTGCCAGCTCTAGCTCAGGACGGAGAC
CCGATCATGTGCCTCTACCCCTTCACAGAATCAAATTGTCGTATACTCTA
TGCCCCATCTACTGAAACGGCAACCGGGAATTCATCAACCACCACTTCAC
CACTTGTTTGACTCGACCTTCCCCTTCCCCGCCCTAAGTACCGACTCCAA
CCCCCCCGCCCAAACATGAACGATGCACGGCACTGCCACTATCCCATGGC
ATGCGCCTTACGACACCATATCGATATTTTAGAGGACGAGGATAGGTCTG
CCGGCACAGGTGCTGGTTGGCGTTGTTGCAATAAATCTAGACAGACCATT
GGGTCATGTTTACGGTGACGATGGGGTGATGACATGATCATGTCTCGGTC
ATGGTCCACTCTCCGTCGTGACCCGGTTATGATTGGGTCTCGACTCGGCA
ATGACACAATCATGGCTTCATCACGGCCAGGTCATGATCTAGTAGCCTGG
CCGAATATTCCTGCGACGTGAGACACATAAATTTATGTCCCGACCCGATT
GGTCTTCATCACCCGGTCATGGTCACAGAGTTGCCCACCCAAAAATAATG
TCACTCATTGCAGCTTGAAGCGACATCTCCGCTTTGGGTAATTTGCCCAA
CAAGACGGTGTGGTGGCCATCTTGTGTATCGGGCCGCAGCCAAGTTGAGC
TCGGTGGTCCGTCTTTTCCTTTGGTGCTGAGTTTATTTCACTATACCGCA
TGACCCATCTGTCAGTTGTCAGTGCATGCAGCTGCTTTCTCTTCCCCAAA
CAGCCGTTTTTGTTCCACACACACCATAATCCGAGGGGCTAGCGGGAAAC
AAACGACGACACATATCTTCGCTGTGCTTCTGTGCACATCGAACGAGGCT
GTACAGCGGCGGTTGGTGGCGCGAACAACAGAGGGGGGGCCCGGCATTAT
CGGGCGTGTCGCAGGCGATTTGCACCGGAAAGCCCCAAAGCTACTCCACC
TGCATTTTCATCGGAGAAATCACCGCGGCGTTTGACAGACTGTCGTGCGC
TTCGAACTTTTCCAGAATATATCGGTTGACCTTCCGTTGCTTGGAATGGT
GTGACAGACATGCCGCAAAAAAGAGTCGCAACGGAAGCAAAATCTAAGGG
TTTGGAAAAAATGACGGCTGTCCCTGGTGTCTTTTGTAAAGGAGACGGTA
ATGTAATTGTTCGGTGTTGTGTCGCTGTGGTGGAGACGAAATGTTATGTC
GCCGGTAGTATTTTGTGGTGGTTCGCGGTTAAAAGCTACCTTAGGAGGTA
GACCTCGTAACTCAAAACTACCGCGGCAATTCACACAAAACTATTTTCTA
TATGTGGTTTTTGTTACGGGCAAACGCATGTTACACAAGGAGAAAATTGT
TGTCAGTGAGGTGTTTATGTCGCGGGAGGTGTTAACGCCAGGGTCAGGCA
GTCAAAGGCAAAAGCATCGATCGATGCGACTAGACAAATGATCAACTTCT
GTTGCTGGGCTTGATCCATCGCTTCAGTCGTGTCTTTCTATTCTCATGCT
GTGATGTGCAAACGCCAGGTTTCCGTTTCGTATGTTGAAAGCGACGATCG
ACCTAGAGCTACAGGCGAAGAACGTCGACGTCGGGCGAACGAAAGTGCTC
TTCTGCCCAGACCTCTGCGCGAGCAACATCAAGGACAACGTTGCGAAGGT
GCAGAAGCGCGGTTTTCTCAGCCGATCGAGCAAGCTGACGTTTCTGCAGG
AGGAACCCGTCGTCCATGTACGTACGTGCAAGATACCGCACCTTGGATAT
CTATGCATGCACACCTAGACAAGAGAATCACTGCTTGTACGACCTCAACC
TTGTGTCGAGAAGACCCGAAGGCACCTCCACACGGGCATCAACACGTATC
TCGCATTCCGTGCGGTGATCAAATGCTCAAGAAGTTCAACAGTACCGTTT
GTCGTCCTGGGTGTTTTTTTCGGGTCTCATGGGTAGTGACGGTAAAAACG
CTCCCGGGGCGTTTCGAGTCGGACGTGATCCATTGTGTCCAGGCCGCTCT
AATTTGACCTGCCAATGGACCTCACCTGACCATAAGAATGACCCCAAGGT
TCGAAATCAAGACCAACCAATCAGCCACAAGGTGGCACTTCTCGGTGCTA
CTCCACACCGCGATTAGCGAATATGGTCGGCGACGTCAAGCGAGGTACCA
CCGCTGTTGACCTAAACGCGCAGTACTTGAATATTGAAACCTTGAGACGT
CATGAGCGGAATCGATCTAGATGAAGATCATTGGATGCTAAGTCTTGGCG
AACACCGGAAAGGCTACACGGGTGGCCAAGAGGGCAGGTTGGGCACCAAC
TACAACCTGGGGGGGGGAAGGTTGGGAGGCCGAGTTCGACCTTGAACACA
TTTTTTCTTCAGGCTTGCAGCCCGCCGTGTTGATTGCAATAACGCCACTA
TCCAAGATGCGGGATAACTTGCACGCTTTGGGCTGCAACTTCCCTACAAC
CTCCCCCCCCAGGTCGTAGTTGGTGCCCAACCTGCCCTCTGGCCAACCGT
GTAGTTCTAGAAAGGTATAGGATTTTTTTTTGTCAACGGCGGAAGGACAT
GAACTAGACGACATCGATGTTGGATGTTGAACGCAAGCTTACCAATACCC
CATTCCAATACCCACGACTGGCCCCTGCGTATCTGCCGTCGAGGCACGGA
TCCTTGCACGGACGGGCGCAACATGTTTTCACTTGTGCCGGACCCGTGGC
TAACCCTAACCCTACTCTTGGGAGTGCCACCATCGGGTTGAGTCCGGCCA
TGAATTTCCCGAGGTTTGGCAGTCAGTAGGATGCGAAACGTTTGGTGGAT
GAGAGCGGGGGGCCCTGTGGCGTTGGTTTCGCTCGACTCATGACAAATTT
CACTCTTGGGTTTATGGGTGGTGGGCGCTTGAAGTATTACCGCCGACGTT
GACGCATTCGTTGCAAAAATGAACCAAGATCGCGCAAGACAGAAGGTTCA
AGGAGGGTTTAGAGCAGGGAGTGAAGGACGGACACAAGCAGCAGGCGGAG
ACCTACCAAGCGGACGTCGCGGCAGGCCGGGCACCAACGGTGGCCGACCC
TGACGACAACTTGTTCGTCACGTACCCCCTGATGAGGCTCACTTTCTACT
TGTACGAGCCGCCCGCCAAGGTCATGTTCAACATCGTCGGTCCGCTGTTT
CTGATACTGTACCTGATGCTGGTGAGCTGTTACATCAGTCCATACTACAG
AGCTGCGTGATTCTTTTCGTTTTAGCATGGGAAAGTTTTTTCACGTGAAG
TGTTTCTAAGTATAAACGTTGATTTGCGGGTTATTCGGTCTACAGACCCA
CGATGGGGCGGCAAGTACTTGGCTGCCGGTGAACGAGCGCAAAGGGCCAC
CGTTACCACGGCGAAGGTGATCTCTACCTCTGAAGTACGGCATACCGAAC
CATGATACTCGTGCCCGGGAAATGCGCCGCTTCGAGGCAATGGCTCGTGC
ATACAGTTGAACTGATTTCCTCCGTTGCAGCCCAACGAAAGGAGAAACAT
GACTAAAGGGTGCGGAAAATTCCCTGGCTTTGTTTCAAAAATTGCCATCA
GATGAACTTCAACGAGTTCTACGGATTGCGAAACGTCTGGGGCGATGGTT
GTCGTGGGGAAGAACGAGACTCAGACTATCTCGCCAACGGGATCGGCATT
GCCATTGCGGCGGCTTTCGTGGTTCCTGCGATTCGTGCGGACAGAATGAA
GTCGTCGTACATCAGGTGGGGTCTTTCGATTGAATACCGTCGCTTGTGCG
CTACCTACCCTTGGCCATCAACGCTCGTAGTCACGAAAGCTTGGTGCGGT
CTCTAAGGACTGGGAATGGGACGTGGCTATTACCGAATGACACAACTTCC
GCTCCCCTATCGCCACGCCCCTGAGCAACCTACAACATCGCCAGATACCT
TTCTCTTTGTCTTTTTCACGTTCGTGAGGGTGAGAACCCTTACCTCGCAA
GGGGACTGATCGTACCATGGAGCCACGCCAACAACAGTCAATTTCGTGGT
GAACACGACTATGACTGTCCCTGGAGGTGATGAGACACCAACACCAAAGG
AAGGCATTTGAAGCGCTATCAATTTAGTTTGCAGTACAGTATGTACTACA
TGGCGGACACGCTCGAGTGAAAGACAGCGTTGCCGTTCAAGGCGCTCGCC
GGATGCCAGCGCCCTTTCAAGATGGTGCTCATCACCTCCGGGTATTCTCC
GTGCCGGCTAGTGAGTGCTGTGGAGCTACCGAATCCAGCATCCATGGTAC
TGACTACTTCCTTCGACACCTCTCGATGATTTGACGCTCTGCAATCGACA
CGCGTCGGACTCCCGAACGCAGCTATACGGATGACTTGATGGCGGTGGCC
TTTCTGCTAGGGCTTGCGCTGTCTACAACACCGTACTGCCGCTTGGCGAT
GTCAGGATGCTTTGTGAGCTTTCTGGTGGTTGTTAGCGCGGTCGTCGCGA
GCGTGCGCCACTTCTTCAAGTGCAAGCACTTGAGGAAAACTGTGGGGCAG
CACCCACCCGTGATGGTGGAGGCCAGCAGCAAGGAGGTCAAGGCCGCGGT
GAGCGTCCGCCGTACCCGTGCCACGCAGAGATCGTTTCATACGGGAACAG
CTTGAAGCCTTTTGCGGATACCCTCGCCAGCCCTTGAATGGATGGAACTG
ACAGCACGTGTGCACGTTTAGGTAGCAGCCTGACCCACATGTGCAAATAT
GCGGAAATATGCCTAGGAAAACCATCTAACATCATCGCACAAAAGTTCAG
CGGCATCGAAACCCTGCCGAAGACGCGTTGTGCCGTTTTATTCATGCGCA
GATCCTGAGTTTCACTCGGCAAGCAACTTGTGATTCACTACTTTGCCCGG
TGTTGGCACGCGGTCAATGTGAACAGGGTTAGGGTTGGCAAGTGCCTATT
ATTTGAAAATGAAAATGTTCTGACTTTTGGTGTGTTCACGCCTGGCTGTT
GCTGGCTTGGTACTCTTTTTGTTTCCGCAGGGCTCGGAATTCAACATGAG
CGAGTGGTTTCATGCGAGCGTCTAGGCAAGGGGTTCATGCTGAAGAAGCT
TGAGGCATCGGACAACCTATTCCGATATATACCATTCGGCGCATGAAGAC
CATGATGGCATTTCCGCGAAGAGCAGACCCTGTAAAATCGTGGCTATCTT
GTACACAATAGAGGTTGCATGTGTTCATTCGGCAAGAGAAATCATCAGCC
AAATGTTGTCGGGGGGCAAGCCGCAGATACCCCTCCTTGTGAGGGACTGC
ACCTCTCCCAAGTTGTTCACTAGATCCAAAGCAAGGCTGTAGGCAGTTCT
GTTGTCGTTGCAGGTCCGGCTTGCTGTAGGAGACATAGATTGGCGACCAT
TGATGACTGCAAGAGGAAAGACACGCCGCATCTGGGAGACAGAACTCTTC
GCCAGCGAATGACCTAGCCCGTGAAAAGCAAAGTGCGAAAAGTCTTGTTG
TTTTAGCGCGAAAGCGGTTGACGTTCATGTGTTTGTATTCCTTGGTGAAA
AGGTCGTTGGGTTGCAGCAGAGGGCTGGCCCAGCAACACGAGCTGTGATA
TTAAAAAGATGAATGCGAGACGTCCGCTGAT

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1397:580..9810+

>mRNA_Ecto-sp13_S_contig1397.3094.1 ID=mRNA_Ecto-sp13_S_contig1397.3094.1|Name=mRNA_Ecto-sp13_S_contig1397.3094.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1284bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1397:580..9810+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGAGCACCGCCCGCAAATGTACCGCAGCAGCCGCCAGCACCATCTCC
GCTTGTCGCGAGCAAATGGGCCACACTTCGTGAGTCTCAACGCGAGGCGA
AGGTGCCAGTTGCCCTGTTCGTGCTGTGCAAGACGGTGGTAGAAGATGAC
CAGGGCGCTCTCTACCTCAATGCTACAGCCGTTCAGAGGGTCCCGCTCGA
AACCACCAGGCCGACGCCCCCGAAGGACCAGCTAGAACAGGACCTCTTGT
TCCACATGAAGGTCAAAGGCCCTAACGCAGGGGGCGGGATTACGAGCCGA
AGGAGGAGCGTGGAGGACGTTCGTGGGCGGAGTCAGCATACCGTCATGGT
GTGTGAGACTCTAGACTTGAAGACCGTCCCGCTGGATGTTCGCAATTATT
GGAACTGGTTTCCGTTTCGTATGTTGAAAGCGACGATCGACCTAGAGCTA
CAGGCGAAGAACGTCGACGTCGGGCGAACGAAAGTGCTCTTCTGCCCAGA
CCTCTGCGCGAGCAACATCAAGGACAACGTTGCGAAGGTGCAGAAGCGCG
GTTTTCTCAGCCGATCGAGCAAGCTGACGTTTCTGCAGGAGGAACCCGTC
GTCCATATCGCGCAAGACAGAAGGTTCAAGGAGGGTTTAGAGCAGGGAGT
GAAGGACGGACACAAGCAGCAGGCGGAGACCTACCAAGCGGACGTCGCGG
CAGGCCGGGCACCAACGGTGGCCGACCCTGACGACAACTTGTTCGTCACG
TACCCCCTGATGAGGCTCACTTTCTACTTGTACGAGCCGCCCGCCAAGGT
CATGTTCAACATCGTCGGTCCGCTGTTTCTGATACTGTACCTGATGCTGA
TGAACTTCAACGAGTTCTACGGATTGCGAAACGTCTGGGGCGATGGTTGT
CGTGGGGAAGAACGAGACTCAGACTATCTCGCCAACGGGATCGGCATTGC
CATTGCGGCGGCTTTCGTGGTTCCTGCGATTCGTGCGGACAGAATGAAGT
CGTCGTACATCAGCTATACGGATGACTTGATGGCGGTGGCCTTTCTGCTA
GGGCTTGCGCTGTCTACAACACCGTACTGCCGCTTGGCGATGTCAGGATG
CTTTGTGAGCTTTCTGGTGGTTGTTAGCGCGGTCGTCGCGAGCGTGCGCC
ACTTCTTCAAGTGCAAGCACTTGAGGAAAACTGTGGGGCAGCACCCACCC
GTGATGGTGGAGGCCAGCAGCAAGGAGGTCAAGGCCGCGGGCTCGGAATT
CAACATGAGCGAGTGGTTTCATGCGAGCGTCTAG