prot_Ecto-sp13_S_contig13963.3091.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13963.3091.1
Unique Nameprot_Ecto-sp13_S_contig13963.3091.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length161
Homology
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Match: D8LTJ2_ECTSI (Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ2_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 1.460e-108
Identity = 159/161 (98.76%), Postives = 159/161 (98.76%), Query Frame = 0
Query:    1 MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLPMDGIHGVDKTRVTKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKR 161
            MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGL MDGIHGVDKTRV KWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKR
Sbjct:  170 MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLAMDGIHGVDKTRVMKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKR 330          
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Match: A0A7S2RVV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVV0_9STRA)

HSP 1 Score: 206 bits (524), Expect = 5.700e-64
Identity = 97/161 (60.25%), Postives = 121/161 (75.16%), Query Frame = 0
Query:    1 MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLPMDGIHGVDKTRVTKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKR 161
            M+R+    F++ RR T GADF +K +    Q ++LQIWDTAGQERFH G+LG  F+RGA+AALLVYD   A SF+QV  WR E+L R+DV P DFP+VV+GNKVD+    PMDGIHGVDK  VT+WC   G GHIETSAKDGTGV+VAM+A+  LAL +++
Sbjct:   23 MRRFCKNSFSEARRATTGADFSSKRMSFAGQEVMLQIWDTAGQERFHHGTLGGAFYRGADAALLVYDATSASSFKQVENWRSEVLSRIDVAPGDFPLVVVGNKVDMEGNTPMDGIHGVDKAAVTEWCRAHGTGHIETSAKDGTGVQVAMEAIGTLALARRK 183          
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Match: A0A482SWX8_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWX8_9ARCH)

HSP 1 Score: 168 bits (426), Expect = 3.970e-50
Identity = 90/159 (56.60%), Postives = 110/159 (69.18%), Query Frame = 0
Query:    3 RYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLPMDGIHGVDKTRVTKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKR 161
            R+A G F+  RRPT+G+DF TK++V  D  + LQIWDTAGQERF+ GS+GS FFRGA+ ALLVYDV    S EQ+A WREE L R   D + FP+VVIGNK+D+   +P++    VD + V  WC     GHIETSAKDG GVE AM A+  LALE  R
Sbjct:   13 RFATGRFSGLRRPTVGSDFQTKKMVVHDVEVTLQIWDTAGQERFNQGSIGSAFFRGAHGALLVYDVNDEKSIEQIAQWREECLSRQLEDEY-FPMVVIGNKIDVREKIPVE--RRVDVSGVLTWCREHSYGHIETSAKDGHGVEAAMLAITGLALENMR 168          
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Match: F0Y7J9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7J9_AURAN)

HSP 1 Score: 165 bits (417), Expect = 1.350e-48
Identity = 86/161 (53.42%), Postives = 110/161 (68.32%), Query Frame = 0
Query:    1 MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLPMDGIHGVDKTRVTKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKR 161
            + ++  G FT  RR T GADF +K +  GD+ + L IWDTAGQERFH G+LG  F+RGA+AALLVYD     +FEQ+ MWR ELL R+D  P +FP+VV+GNKVD+      +     ++  V +WC   G+G   TSAKDGTGV VAM+AVA+LALE KR
Sbjct:   27 LMQFVHGKFTPARRVTTGADFASKVLHLGDREVRLVIWDTAGQERFHHGTLGGAFYRGADAALLVYDTTDIRTFEQIEMWRRELLQRIDGPPEEFPVVVVGNKVDVP-----NKTREHEQAAVVRWCRDLGIGLCLTSAKDGTGVAVAMEAVAMLALENKR 182          
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Match: A0A8J2S8J0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8J0_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.900e-42
Identity = 80/161 (49.69%), Postives = 102/161 (63.35%), Query Frame = 0
Query:    1 MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLPMDGIHGVDKTRVTKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKR 161
            ++RY    F   RR T+GADF +K +  G++ + L IWDTAGQERFH G++G  F+RGA+ ALLVYD     +F QV +WR ELL R+D  P  FPIV +GNK+DL      D     D+     WC   G+G +  SA DGTGV VAM+AVA LALE K+
Sbjct:   76 LERYTKNSFRPERRVTLGADFASKVIEVGEERVRLVIWDTAGQERFHHGTIGGAFYRGADGALLVYDTTDFATFAQVELWRRELLQRVD-GPEAFPIVCVGNKMDLPCPTRSD-----DEKAAEAWCAAHGVGLLFASACDGTGVAVAMEAVAALALENKK 230          
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Match: A0A7S2DTN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DTN3_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.410e-41
Identity = 66/109 (60.55%), Postives = 82/109 (75.23%), Query Frame = 0
Query:   42 GQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLPMDGIHGVDKTRVTKWCEMQGMGHIETSAKDGTGVEVAMQ 150
            GQERFH G+LGS F+RGA+ A+LVYDV  A + +Q+ +WR EL+ R+D+DP  FP+V++GNK DL     MDGI GVDK  V KWC   G+GHIETSAKDGTGV  AM+
Sbjct:    1 GQERFHHGTLGSAFYRGADGAVLVYDVTQAKTLDQIELWRSELMQRIDMDPDQFPLVMVGNKTDLEPHTVMDGISGVDKNTVLKWCRDHGVGHIETSAKDGTGVTAAME 109          
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Match: A0A7S3K3U1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U1_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.380e-40
Identity = 81/163 (49.69%), Postives = 105/163 (64.42%), Query Frame = 0
Query:    1 MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQ--PMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLPMDGIHGVDKTRVTKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKR 161
            + ++  G F   RR T GADF ++ V+E DQ   + L IWDTAGQERFH G+LG+ F+RGA+ ALLVYD     SFEQ+ MWR ELL R+   P +FP+VV+GNK+D+ +          +   V KWC   G+G   TSAKDGTGV  AM+A+A LA E K+
Sbjct:   28 LTQFIHGRFDSTRRATTGADFASR-VLEIDQGRKIRLVIWDTAGQERFHHGTLGNAFYRGADGALLVYDTTDIRSFEQIEMWRGELLQRVQGPPDEFPVVVVGNKIDIPSET-----RDSEFAAVQKWCRDLGIGICLTSAKDGTGVLAAMEAIAHLAYEAKQ 184          
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Match: A0A836CPL3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPL3_9STRA)

HSP 1 Score: 143 bits (361), Expect = 6.630e-40
Identity = 88/192 (45.83%), Postives = 106/192 (55.21%), Query Frame = 0
Query:   18 GADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHD-FPIVVIGNKVDL----ATGLPMDGIHG------------VDKTR--------------------------------VTKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQK 160
            GADFMTK       P+LLQIWDTAGQERFH G+LG+GF+RGA+AAL+VYDV    S +QVAMWR+ELL RLD +    FPIVV+ NK +L    + G P+D                VD+                                  V  WC   GMGH+ETSAKDG GV+ AM  VA+LALE+K
Sbjct:    6 GADFMTKSEELRGTPLLLQIWDTAGQERFHVGALGAGFYRGASAALIVYDVTSPASVKQVAMWRDELLERLDEESRQQFPIVVLANKANLVKEGSCGSPVDRAKSTVDLVKEGSSSPVDRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAWCASLGMGHLETSAKDGVGVQPAMTCVAMLALEEK 197          
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Match: A0A8H8DM54_9FUNG (Ras-related protein rab-7a n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H8DM54_9FUNG)

HSP 1 Score: 139 bits (350), Expect = 3.740e-39
Identity = 77/162 (47.53%), Postives = 104/162 (64.20%), Query Frame = 0
Query:    1 MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLATGLPMDGIHGVDKTRVTKWCEMQG-MGHIETSAKDGTGVEVAMQAVAVLALEQK 160
            M +Y    FT+  + TIGADF+TKEV+  D+ + +QIWDTAGQERF   SLG  F+RGA+  +LV+DV  A SFE +  WR+E LV+    DP +FP VV+GNKVD+      D    V +TR   WC+ +G + + ETSAK+   VE A Q +A +AL Q+
Sbjct:    1 MNQYVNKKFTNQYKATIGADFLTKEVMVDDRVVTIQIWDTAGQERFQ--SLGVAFYRGADCCVLVFDVNSAKSFETLDSWRDEFLVQASPRDPQNFPFVVLGNKVDVE-----DSKRSVSQTRAIAWCQSKGNVPYFETSAKEAINVEQAFQTIAKIALMQE 155          
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Match: A0A7S3H9L0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9L0_9STRA)

HSP 1 Score: 137 bits (346), Expect = 6.050e-38
Identity = 80/163 (49.08%), Postives = 103/163 (63.19%), Query Frame = 0
Query:    1 MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLATGLPMDGIHGVDKTRVTKWCEMQG---MGHIETSAKDGTGVEVAMQAVAVLALEQ 159
            M +Y    F+   + TIGADF+TKEV+  D+ + LQIWDTAGQERF   SLG  F+RGA+A +LV+D+    SFEQ+  WREE L + +  DP +F  VVIGNKVD       +    V K++VT+WC+ QG   + + ETSAKD T VEVA    A  AL Q
Sbjct:   25 MNQYVNQRFSSQYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQ--SLGVAFYRGADACILVHDITAEKSFEQLNSWREEFLAQANPRDPDNFSFVVIGNKVD------KESERRVPKSKVTQWCKSQGPKPIPYFETSAKDATKVEVAFLEAAQAALHQ 179          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13963.3091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTJ2_ECTSI1.460e-10898.76Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2RVV0_9STRA5.700e-6460.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482SWX8_9ARCH3.970e-5056.60GTP-binding protein n=1 Tax=archaeon TaxID=1906665... [more]
F0Y7J9_AURAN1.350e-4853.42Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2S8J0_9STRA1.900e-4249.69Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2DTN3_9STRA2.410e-4160.55Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3K3U1_9STRA2.380e-4049.69Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A836CPL3_9STRA6.630e-4045.83P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8H8DM54_9FUNG3.740e-3947.53Ras-related protein rab-7a n=1 Tax=Olpidium bornov... [more]
A0A7S3H9L0_9STRA6.050e-3849.08Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 26..48
score: 46.57
coord: 8..24
score: 32.46
coord: 93..106
score: 44.75
coord: 134..156
score: 33.05
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..159
e-value: 7.7E-8
score: -0.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..159
e-value: 4.7E-34
score: 129.1
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 1..160
e-value: 1.2E-6
score: -32.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..161
e-value: 2.8E-38
score: 133.1
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..156
NoneNo IPR availablePANTHERPTHR24073:SF369SI:DKEY-13A21.4coord: 1..156
NoneNo IPR availablePROSITEPS51419RABcoord: 1..161
score: 21.884
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 12..152
e-value: 5.2E-15
score: 53.6
IPR001806Small GTPasePFAMPF00071Rascoord: 2..153
e-value: 1.2E-33
score: 116.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13963contigEcto-sp13_S_contig13963:1353..4555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13963.3091.1mRNA_Ecto-sp13_S_contig13963.3091.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13963 1329..4555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13963.3091.1 ID=prot_Ecto-sp13_S_contig13963.3091.1|Name=mRNA_Ecto-sp13_S_contig13963.3091.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp
MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGS
LGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVI
GNKVDLATGLPMDGIHGVDKTRVTKWCEMQGMGHIETSAKDGTGVEVAMQ
AVAVLALEQKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase