mRNA_Ecto-sp13_S_contig13958.3086.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Match: D8LI10_ECTSI (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI10_ECTSI) HSP 1 Score: 315 bits (806), Expect = 4.280e-107 Identity = 160/164 (97.56%), Postives = 162/164 (98.78%), Query Frame = 1
Query: 1 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGAELFYVALYLLVFVPEASLALGGGGVAISLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASSESEAADGVASKQK 492
SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVG ELFYVALYLLVFVPEASLALGGGG A+SLHAVCYYVFLPACVCKQAVNVAQLCAASLSLAS+ESEAADGVASKQK
Sbjct: 64 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFVPEASLALGGGGAAVSLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASAESEAADGVASKQK 227
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Match: A0A835ZHK8_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK8_9STRA) HSP 1 Score: 167 bits (423), Expect = 4.870e-49 Identity = 89/150 (59.33%), Postives = 109/150 (72.67%), Query Frame = 1
Query: 1 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGR-HHKAADTLADRNVITRLFYGCYPFFAFCCVGAELFYVALYLLVFVPEASLALGGGGVAISLHAVCYYVFLPACVCKQAVNVAQLCAASLSLA 447
S FGA LDMVTDRCSTAG+L VL+ LY AF F+ LMF+D+FSHW+HV S A + HHKAA TL RN + RLFY CYPFF +CCV E FY+ LY+L F +A + +GG V + L + +Y LPACVCKQAVN+AQLCAA+ S+A
Sbjct: 64 SSFGATLDMVTDRCSTAGMLFVLAGLYPAY--AFHFMCLMFLDIFSHWIHVASVATKGHHKAAGTLQGRNWLIRLFYSCYPFFGYCCVFTEFFYICLYMLAFNKDAFITVGG--VEVHLWQLTFYGCLPACVCKQAVNIAQLCAAAYSMA 209
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Match: D7FMQ7_ECTSI (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMQ7_ECTSI) HSP 1 Score: 165 bits (417), Expect = 2.590e-48 Identity = 91/152 (59.87%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 1 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGAELFYVALYLLVFVPEASLALGGGGVAISLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASSE 456
S+FGAVLDMVTDRCSTAGLL+VLSRLY+ AF FL+LMFIDLFSHWMH S +HHK+ TL RN++ R +Y PFFAFCC+GAELFYV LYLL FV E S A L C+++ LPACV KQ VN+AQ+ +A+ LA E
Sbjct: 55 SRFGAVLDMVTDRCSTAGLLLVLSRLYDRR-HAFAFLVLMFIDLFSHWMHTHSVVEKHHKSTATLKRRNMLIRTYYDNLPFFAFCCIGAELFYVLLYLLHFVSEESRAFA------PLRTSCFWLCLPACVLKQFVNIAQIFSAASCLALEE 199
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Match: W2QG98_PHYPN (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=13 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QG98_PHYPN) HSP 1 Score: 152 bits (383), Expect = 1.450e-43 Identity = 81/152 (53.29%), Postives = 103/152 (67.76%), Query Frame = 1
Query: 1 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGAELFYVALYLLVFVPEASLALGGGGVAISLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASSE 456
S FGAVLDMVTDRCSTAGLL+VLS LY F++LL++ D SHW H+ S+ G H A A+RN + R +YGCYPFF FCCVG ELFY+ LY+L F P + + + + +CYYV LPACVCK NVAQLC+A+ S+A+ +
Sbjct: 25 STFGAVLDMVTDRCSTAGLLVVLSHLYPQYMLVFMYLLIL--DFSSHWYHMYSSRGHHKVVA---AERNFLLRFYYGCYPFFGFCCVGTELFYILLYVLHFDPTLLIPF----INVPVMQLCYYVCLPACVCKNITNVAQLCSAAYSVAAED 167
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Match: M4C1S7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1S7_HYAAE) HSP 1 Score: 152 bits (385), Expect = 1.110e-42 Identity = 82/152 (53.95%), Postives = 104/152 (68.42%), Query Frame = 1
Query: 1 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGAELFYVALYLLVFVPEASLALGGGGVAISLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASSE 456
S FGAVLDMVTDRCSTAGLL+VLS LY F++LL++ D SHW+H+ S+ G HHK A+RN + R +Y CYPFF FCCVG ELFY+ LY+L F P + G+ + + +CYYV LPACVCK NVAQLC+A+ S+ S +
Sbjct: 121 SSFGAVLDMVTDRCSTAGLLVVLSHLYPQYMVCFIYLLVL--DFSSHWLHMYSSRG-HHKVVP--AERNFLLRFYYSCYPFFGFCCVGTELFYILLYVLHFDPALMIP----GINVPVMQLCYYVCLPACVCKTMTNVAQLCSAAHSVVSED 263
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Match: H3H1C0_PHYRM (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=7 Tax=Phytophthora TaxID=4783 RepID=H3H1C0_PHYRM) HSP 1 Score: 151 bits (382), Expect = 1.320e-42 Identity = 82/152 (53.95%), Postives = 104/152 (68.42%), Query Frame = 1
Query: 1 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGAELFYVALYLLVFVPEASLALGGGGVAISLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASSE 456
S FGAVLDMVTDRCSTAGLL+VLS LY F++LL++ D SHW H+ S+ G HHK A+RN + R +YGCYPFF +CCVGAELFY+ LY+L F P + + + + +CYYV PACVCK NVAQLC+A+ S+AS +
Sbjct: 89 SSFGAVLDMVTDRCSTAGLLVVLSHLYPQYMVVFMYLLIL--DFSSHWYHMYSSRG-HHKLVP--AERNFVLRFYYGCYPFFGYCCVGAELFYILLYVLHFNPTLLIPY----INVPVMKLCYYVCFPACVCKNICNVAQLCSAAHSIASED 231
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Match: A0A662WRC1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRC1_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.540e-42 Identity = 83/149 (55.70%), Postives = 101/149 (67.79%), Query Frame = 1
Query: 1 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGAELFYVALYLLVFVPEASLALGGGGVAISLHAVCYYVFLPACVCKQAVNVAQLCAASLSLA 447
S FGAVLDMVTDRCSTAGLL+VLS LY FL+LL++ D SHW H+ S+ G HHK A+RN + R +YGCYPFF FCCVG ELFY+ LY+L F P + + I + +CYYV LPACV K NVAQLC+A+ S+A
Sbjct: 16 SSFGAVLDMVTDRCSTAGLLVVLSHLYPQYMLVFLYLLIL--DFSSHWYHMYSSRG-HHKLVP--AERNFLLRFYYGCYPFFGFCCVGTELFYILLYVLYFDPTLLIPY----INIPVMQLCYYVCLPACVFKNITNVAQLCSAAHSIA 155
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Match: A0A0N7L8K7_PLAHL (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L8K7_PLAHL) HSP 1 Score: 149 bits (376), Expect = 5.230e-42 Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = 1
Query: 1 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGAELFYVALYLLVFVPEASLALGGGGVAISLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASSE 456
S +GAVLDMVTDRCSTAGLL+VLS LY FL+LL++ D SHW H+ S+ G HHK A+RN + R +YG YPFF FCCVGAELFY+ LY+L F P + + V + + +C+YV LPAC+CK VN+AQLC+A+ S+A+ +
Sbjct: 64 STYGAVLDMVTDRCSTAGLLLVLSHLYPQYWIIFLYLLIL--DFSSHWYHMYSSRG-HHKVVS--AERNFVLRFYYGFYPFFGFCCVGAELFYILLYVLHFNPTVLIPI----VNVPVMKLCFYVCLPACICKNIVNLAQLCSAASSIATDD 206
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Match: A0A3M6VUR7_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUR7_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.210e-41 Identity = 81/152 (53.29%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 1 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGAELFYVALYLLVFVPEASLALGGGGVAISLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASSE 456
S FGAVLDMVTDRCSTAGLL+VLS LY F++LL++ D SHW H+ S+ G HHK A+RN + R +YGCYPFF FCCVG ELFY+ LY+L F P+ + + + + + +CYYV LPACVCK N+AQL +A+ S+AS +
Sbjct: 69 SSFGAVLDMVTDRCSTAGLLIVLSHLYPQYMMLFMYLLIL--DFSSHWYHMYSSRG-HHKLVS--AERNFLLRFYYGCYPFFGFCCVGTELFYILLYVLYFDPKLLIPI----INVPVMQLCYYVCLPACVCKIFTNLAQLFSAAHSIASED 211
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Match: A0A5D6XI13_9STRA (CDP-diacylglycerol--inositol 3-phosphatidyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI13_9STRA) HSP 1 Score: 146 bits (369), Expect = 6.460e-41 Identity = 82/156 (52.56%), Postives = 107/156 (68.59%), Query Frame = 1
Query: 1 SKFGAVLDMVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGAELFYVALYLLVFVPEASLALGGGGVAISLHAVCYYVFLPACVCKQAVNVAQLCAASLSLASSESEAA 468
S FGAVLDMVTDRCSTAGLL++LS LY AFLFLL++ D SHW H+ ++ G H A A+RN++ R++YG YPFF FCCVG ELFY+ LY+L F P A + GV + L +CYYV PACV K +N+AQL +A+ ++A + +AA
Sbjct: 67 SNFGAVLDMVTDRCSTAGLLVILSHLYPQYMLAFLFLLIL--DFSSHWYHMYASKGHHKTVA---AERNLLLRVYYGNYPFFGFCCVGTELFYILLYVLHFFPTALIP----GVDVPLAQLCYYVCGPACVLKNLINIAQLTSAAHAVAVEDVKAA 213 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13958.3086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13958.3086.1 >prot_Ecto-sp13_S_contig13958.3086.1 ID=prot_Ecto-sp13_S_contig13958.3086.1|Name=mRNA_Ecto-sp13_S_contig13958.3086.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp MVTDRCSTAGLLMVLSRLYEGGTPAFLFLLLMFIDLFSHWMHVQSTAGRHback to top mRNA from alignment at Ecto-sp13_S_contig13958:535..1959+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13958.3086.1 ID=mRNA_Ecto-sp13_S_contig13958.3086.1|Name=mRNA_Ecto-sp13_S_contig13958.3086.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1425bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13958:535..1959+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13958:535..1959+ >mRNA_Ecto-sp13_S_contig13958.3086.1 ID=mRNA_Ecto-sp13_S_contig13958.3086.1|Name=mRNA_Ecto-sp13_S_contig13958.3086.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13958:535..1959+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |