prot_Ecto-sp13_S_contig13956.3085.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13956.3085.1
Unique Nameprot_Ecto-sp13_S_contig13956.3085.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length167
Homology
BLAST of mRNA_Ecto-sp13_S_contig13956.3085.1 vs. uniprot
Match: D8LMN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN4_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 2.060e-115
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0
Query:    1 MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQKVGEVEAFNVREAFLGGETGR 166
            MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRH+HGLGGLLPDTVD+QIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQKVGE EAFNVREAFLGGETGR
Sbjct:   38 MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHKHGLGGLLPDTVDFQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQKVGEAEAFNVREAFLGGETGR 203          
BLAST of mRNA_Ecto-sp13_S_contig13956.3085.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 3.330e-103
Identity = 159/166 (95.78%), Postives = 163/166 (98.19%), Query Frame = 0
Query:    1 MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQKVGEVEAFNVREAFLGGETGR 166
            MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMK+GIAAGLRRGRH HRHGLGGLLPDTVDYQIKGLTDGNRLSVFV+CQQRENSANMGRRFGNS+LFHKLLARECNRHGISYTLPAQPLVAQK GE EAFN+REAFLGGETGR
Sbjct:  864 MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHCHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVVCQQRENSANMGRRFGNSNLFHKLLARECNRHGISYTLPAQPLVAQKGGEAEAFNIREAFLGGETGR 1029          
BLAST of mRNA_Ecto-sp13_S_contig13956.3085.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.130e-10
Identity = 47/143 (32.87%), Postives = 69/143 (48.25%), Query Frame = 0
Query:    1 MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHRHGLGGLL---PDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQ 140
            MLTTVFRRWD   T++ N  +AK+ IRN  RS   +    + VS+ TP  KL+ +K        R +   R   G L    P++VDY  + +     + VF +  Q+ +  +   +  N  L    LA  C+  G+ Y LP Q
Sbjct:  993 MLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTLLVSIATPRAKLEALKE-------RMQEYARAVTGPLYSCDPNSVDYCCRRVISCTNMEVFFVYSQKGSWQDNYLKVKNFHLMSLRLAEVCHELGLEYALPTQ 1128          
BLAST of mRNA_Ecto-sp13_S_contig13956.3085.1 vs. uniprot
Match: A0A067JXY6_JATCU (Mechanosensitive ion channel protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JXY6_JATCU)

HSP 1 Score: 57.8 bits (138), Expect = 1.150e-6
Identity = 41/137 (29.93%), Postives = 64/137 (46.72%), Query Frame = 0
Query:    1 MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTL 137
            +LTTVF R+D Q  +IAN+++A KAI N +RS          V + TP EK+  MK  I + +    H +        P  +    K + D NR+ + +    R N  +MG R+   +L  + + +      I Y L
Sbjct:  737 ILTTVFLRYDNQRIVIANSVLATKAISNYYRSPDMGDAVEFVVHIATPAEKIAAMKQRINSYIENKDHWY--------PSPMII-FKDIEDLNRVRIAIWLTHRMNHQDMGERWSRRALLVEEMVKIFRELDIQYRL 864          
BLAST of mRNA_Ecto-sp13_S_contig13956.3085.1 vs. uniprot
Match: A0A2G4SH34_RHIZD (EF-hand domain-containing protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SH34_RHIZD)

HSP 1 Score: 56.6 bits (135), Expect = 2.880e-6
Identity = 41/166 (24.70%), Postives = 73/166 (43.98%), Query Frame = 0
Query:    1 MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQKV-GEVEAFNVREAFLGGETG 165
            +L T F +WDG      N++++ + I N  RS R      + +  +TP  K+ ++ S +     +    +        P++    I    + N +S+    +  +N  + G R+   + F   L  EC R GI YTLP QPL  + +   +E++N+      G  G
Sbjct:  667 LLVTTFLKWDGSVVYAKNSVLSTQYIINVRRSGRTGETNELQIHFNTPTWKIKKLISHMQEWCNQFPKHYS-------PNSASCNILSFQNQNLISLSFYFEHAQNWQDPGGRWLRHNNFMFELKEECERLGIEYTLPTQPLENRTLDAPLESYNMGSKSAYGLEG 825          
BLAST of mRNA_Ecto-sp13_S_contig13956.3085.1 vs. uniprot
Match: A0A167LJ94_PHYB8 (EF-hand domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167LJ94_PHYB8)

HSP 1 Score: 56.6 bits (135), Expect = 2.900e-6
Identity = 38/146 (26.03%), Postives = 66/146 (45.21%), Query Frame = 0
Query:    1 MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQK 146
            +L T F +WDG      N+I+A + I N  R+ R      I V   TP  K+++++  +     +    +        PD+    I    + NR+++    +  +N  + G R+   + +   L   C R GISYT+P QP+  +K
Sbjct:  729 LLVTTFNKWDGSIVYAKNSILATQYIINCRRTGRTCEGIDIHVHFSTPGWKINRLRDEMFEWSNKFPKLYT-------PDSTSANIISFENLNRITISFYFEHTQNWQDAGGRWMRHNNYMMELKETCERLGISYTMPNQPVDLKK 867          
BLAST of mRNA_Ecto-sp13_S_contig13956.3085.1 vs. uniprot
Match: A0A0L0H4I0_SPIPD (EF-hand domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H4I0_SPIPD)

HSP 1 Score: 54.7 bits (130), Expect = 1.340e-5
Identity = 40/140 (28.57%), Postives = 64/140 (45.71%), Query Frame = 0
Query:    1 MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQ 140
            +LTTVF+R DGQ     N ++A K I N  RS        + ++ DTP EKL  +K  +   ++    R   G+        D  I  + + N+L V V+ + + N  +  +R+   ++F   L +     GI Y  P Q
Sbjct:  772 VLTTVFKRLDGQLIYAPNTLVASKLIHNLRRSGDQSESIELQLNFDTPEEKLRALKERMIDFVK-SEPREFQGV-------CDIHISEIENLNKLKVNVILKHKGNWQDGSKRWNRRTMFMFALKKNLLELGIRYATPPQ 903          
BLAST of mRNA_Ecto-sp13_S_contig13956.3085.1 vs. uniprot
Match: A0A507E7B5_9FUNG (EF-hand domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E7B5_9FUNG)

HSP 1 Score: 53.1 bits (126), Expect = 4.600e-5
Identity = 43/164 (26.22%), Postives = 69/164 (42.07%), Query Frame = 0
Query:    1 MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQKVGEVEAFNVREAFLGGET 164
            +LTTVF+R DGQ     N ++A K I N  RS        I +   TP EKL Q++  +   ++      R  +G       D  I  + + N+L + V+ + + N  +  +R+G  ++F   L        I Y  P Q  V    G   +     A + G +
Sbjct:  901 VLTTVFKRMDGQLIYAPNTLVATKLIHNLRRSGDQSECIEIQLDFTTPEEKLRQLRERLVDYVKS---EPREFVG-----ACDVHIADIENVNKLKLNVILKHKGNWQDGSKRWGRRTMFMYALKHHLTELEIRYLTPPQHKVDGSTGVTVSAGSTAASVPGTS 1056          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13956.3085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LMN4_ECTSI2.060e-11598.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSR3_9PHAE3.330e-10395.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNU8_9STRA4.130e-1032.87Mechanosensitive ion channel-domain-containing pro... [more]
A0A067JXY6_JATCU1.150e-629.93Mechanosensitive ion channel protein n=2 Tax=Jatro... [more]
A0A2G4SH34_RHIZD2.880e-624.70EF-hand domain-containing protein n=4 Tax=Rhizopus... [more]
A0A167LJ94_PHYB82.900e-626.03EF-hand domain-containing protein n=1 Tax=Phycomyc... [more]
A0A0L0H4I0_SPIPD1.340e-528.57EF-hand domain-containing protein n=2 Tax=Spizello... [more]
A0A507E7B5_9FUNG4.600e-526.22EF-hand domain-containing protein n=1 Tax=Powellom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006685Mechanosensitive ion channel MscSPFAMPF00924MS_channelcoord: 2..122
e-value: 4.2E-5
score: 23.2
NoneNo IPR availablePANTHERPTHR31618FAMILY NOT NAMEDcoord: 2..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13956contigEcto-sp13_S_contig13956:2068..3387 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13956.3085.1mRNA_Ecto-sp13_S_contig13956.3085.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13956 572..4276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13956.3085.1 ID=prot_Ecto-sp13_S_contig13956.3085.1|Name=mRNA_Ecto-sp13_S_contig13956.3085.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp
MLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPME
KLDQMKSGIAAGLRRGRHRHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVL
CQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQKVGEV
EAFNVREAFLGGETGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006685MscS_channel