prot_Ecto-sp13_S_contig13942.3080.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13942.3080.1
Unique Nameprot_Ecto-sp13_S_contig13942.3080.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 3.460e-60
Identity = 116/170 (68.24%), Postives = 120/170 (70.59%), Query Frame = 0
Query:    1 MLVKLLQRVGTTYVPPRVVAWRYRRGQRSLLQVR--------------------GGSFLGPATAAI--------------------VAEEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 130
            MLVKLLQRVGTTYVPPRV+AWRYRRGQRSLLQ                      GG     +T  +                    VAEEE+EV VPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR
Sbjct:  226 MLVKLLQRVGTTYVPPRVIAWRYRRGQRSLLQAASVEEKPLDRQEGQTVETNGSGGDAEEISTKGVGVARDGASAQEKADVNEVDAVAEEEDEVGVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 395          
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 2.340e-59
Identity = 120/191 (62.83%), Postives = 122/191 (63.87%), Query Frame = 0
Query:    1 MLVKLLQRVGTTYVPPRVVAWRYRRGQRSLLQ-------------------------------------VRGGSFLGPATAA------------------------IVAEEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 130
            MLVKLLQRVGTTYVPPRVVAWRYRRGQRSLLQ                                     V  G   G A  +                        +VAEEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR
Sbjct:  315 MLVKLLQRVGTTYVPPRVVAWRYRRGQRSLLQNLESTPDAASDGGDCCQDEQQAASVEEKPLERQEGETVEAGGGEGDAEESSAGGVGVAQDGPPAQVKVDATEVDVVAEEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 505          
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Match: A0A7S2WC38_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WC38_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.460e-46
Identity = 86/132 (65.15%), Postives = 105/132 (79.55%), Query Frame = 0
Query:    1 MLVKLLQRVGTTYVPPRVVAWRYRRGQRSLLQVRGGSFLGPATAAIVAEE--EEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 130
            + +KL+QR G  ++PP+VV WRY+RGQRSLL    G+  G  +A +  EE  +E+VD+PEE+ED++E LLCGLRDRDT+VRWSAAKGIGRIT RLP ELADDVV  VL+LF  +E D AWHGGCLALAELAR
Sbjct:  321 LTMKLVQRSGLNFLPPKVVKWRYQRGQRSLLH---GAAKGVESAQVELEESEDEDVDIPEEVEDVIEKLLCGLRDRDTIVRWSAAKGIGRITSRLPEELADDVVAYVLELFDVSEGDSAWHGGCLALAELAR 449          
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Match: UPI0018D85098 (tubulin-specific chaperone D-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D85098)

HSP 1 Score: 162 bits (409), Expect = 1.320e-43
Identity = 81/136 (59.56%), Postives = 99/136 (72.79%), Query Frame = 0
Query:    1 MLVKLLQRVGTTYVPPRVVAWRYRRGQRSLLQVRGGSFLGPATAAIVA------EEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 130
            + +KL+QR+G T++  R   WRY+RG RSL     G    P   A V+      +E++E DVPEE+E+++E LL GLRDRDTVVRWSAAKG+GR+T RLPRELAD VV SVL+LF   EWDGAWHGGCLALAEL R
Sbjct:  301 LAMKLIQRLGLTFLRARTAVWRYQRGSRSLADNLNGQVSVPLAVATVSSQIAPEDEDDEYDVPEEIEEVIEQLLVGLRDRDTVVRWSAAKGVGRLTSRLPRELADQVVESVLELFNLREWDGAWHGGCLALAELGR 436          
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.340e-43
Identity = 85/142 (59.86%), Postives = 100/142 (70.42%), Query Frame = 0
Query:    1 MLVKLLQRVGTTYVPPRVVAWRYRRGQRSLLQVRGGSFLGPATAAIV------------AEEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 130
            M+VKL QR+G  ++PPRVVAWRY+RGQRSLLQ   G                         ++ E +V EE+E++VE LLCGLRDRDTVVRWSAAKG+GR+T RLP  LAD+VV SVLDLF +AE DG WHGGCLALAELAR
Sbjct:  328 MVVKLFQRIGLAFLPPRVVAWRYQRGQRSLLQNLAGXXXXXXXXXXXXXXXXXXXXXXEGADDVEFEVAEEVEEVVEQLLCGLRDRDTVVRWSAAKGVGRVTGRLPLALADEVVGSVLDLFSDAESDGGWHGGCLALAELAR 469          
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Match: A0A2H6N9H2_MICLE (Uncharacterized protein (Fragment) n=1 Tax=Micrurus lemniscatus carvalhoi TaxID=129465 RepID=A0A2H6N9H2_MICLE)

HSP 1 Score: 153 bits (386), Expect = 2.120e-43
Identity = 80/135 (59.26%), Postives = 98/135 (72.59%), Query Frame = 0
Query:    3 VKLLQRVGTTYVPPRVVAWRYRRGQRSL---LQVRGGSFLGPATAAIVA----EEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 130
            VKL+QR+G T++ P+V  WRY+RG RSL   LQ   G  +   T  I      EEEEE D+P E+E+++E LL GL+D+DT+VRWSAAKG+GR+T RLP+ELADDVV SVLD F   E D AWHGGCLALAEL R
Sbjct:  101 VKLVQRLGLTFLKPKVAKWRYQRGFRSLAANLQFSSGGLIPQKTENISIDTGEEEEEEYDIPGEIENVIEQLLIGLKDKDTIVRWSAAKGVGRLTGRLPKELADDVVGSVLDCFSFQETDNAWHGGCLALAELGR 235          
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Match: H3A984_LATCH (Uncharacterized protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3A984_LATCH)

HSP 1 Score: 153 bits (387), Expect = 7.080e-43
Identity = 81/135 (60.00%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    3 VKLLQRVGTTYVPPRVVAWRYRRGQRSL---LQVRGGS----FLGPATAAIVAEEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 130
            VKL+QR+G T++ P+V  WRY+RG RSL   LQ+   S     L    ++ V EEEEE D+P E+E+++E LL GL+DRDTVVRWSA KGIGR+T RLP+ELADDVV SVLD F   E + AWHGGCLALAEL R
Sbjct:  220 VKLVQRLGLTFLKPKVAKWRYQRGNRSLAANLQISAKSQHSLVLQSVQSSEVEEEEEEYDIPREIENVIEQLLIGLKDRDTVVRWSAGKGIGRVTGRLPKELADDVVGSVLDCFSFKETNDAWHGGCLALAELGR 354          
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Match: A0A3M6UA48_POCDA (Uncharacterized protein (Fragment) n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UA48_POCDA)

HSP 1 Score: 149 bits (376), Expect = 1.030e-42
Identity = 79/129 (61.24%), Postives = 91/129 (70.54%), Query Frame = 0
Query:    8 RVGTTYVPPRVVAWRYRRGQRSLLQVRGGSFLGPA------TAAIVAEEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 130
            R+G T++ PR+ AWRY+RG RSL       F          TA +   EEE+ DVPEELEDI+E LL GLRDRDTVVRWSAAKGIGRIT RLP+ELAD +V +VL+LF   E D  WHGGCLALAEL R
Sbjct:    1 RLGLTFLKPRIAAWRYQRGSRSLAYNLANPFSQEQNENSHHTAGLNTAEEEDYDVPEELEDIIEKLLTGLRDRDTVVRWSAAKGIGRITGRLPQELADQIVENVLELFSTRESDCGWHGGCLALAELGR 129          
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Match: A0A6G1RVN5_9GRUI (Tubulin folding cofactor D (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A6G1RVN5_9GRUI)

HSP 1 Score: 156 bits (394), Expect = 1.090e-42
Identity = 81/132 (61.36%), Postives = 99/132 (75.00%), Query Frame = 0
Query:    4 KLLQRVGTTYVPPRVVAWRYRRGQRSL---LQVRGGSFLGP--ATAAIVAEEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 130
            KL+QR+G T+V P+V  WRY+RG RSL   LQ +G     P   TA   A++EEE D+P E+E++VE LL GL+D+DT+VRWSAAKGIGRIT RLP+ELADDV+ S+LD F   E D AWHGGCLALAEL R
Sbjct:  301 KLVQRLGLTFVKPKVAKWRYQRGCRSLAANLQAQGSGVQAPMVTTADNEADDEEEYDIPGEIENVVEQLLVGLKDKDTIVRWSAAKGIGRITGRLPKELADDVIGSLLDCFSFQETDNAWHGGCLALAELGR 432          
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Match: UPI00145820B7 (tubulin-specific chaperone D-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145820B7)

HSP 1 Score: 159 bits (402), Expect = 1.160e-42
Identity = 78/129 (60.47%), Postives = 102/129 (79.07%), Query Frame = 0
Query:    3 VKLLQRVGTTYVPPRVVAWRYRRGQRSLLQ-VRGGSFLGPATAAIVAEEEEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADDVVCSVLDLFVEAEWDGAWHGGCLALAELAR 130
            +K++QR+G T++  RV +WRY+RG RSL   ++ G   G +    +A+E+EE D+PEE+E+++E LL GL+D+DTVVRWSAAKGIGR+T RLPRELAD+VV SVL+LF   E DGAWHGGCLALAEL R
Sbjct:  296 IKVIQRLGLTFLKNRVASWRYQRGSRSLTDNLKKGYQPGSSGVNSIAQEDEEYDIPEEVEEVIEQLLSGLKDKDTVVRWSAAKGIGRVTGRLPRELADEVVGSVLELFTLQETDGAWHGGCLALAELGR 424          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13942.3080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KH41_9PHAE3.460e-6068.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNX3_ECTSI2.340e-5962.83Tubulin folding cofactor D n=1 Tax=Ectocarpus sili... [more]
A0A7S2WC38_9STRA1.460e-4665.15Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
UPI0018D850981.320e-4359.56tubulin-specific chaperone D-like n=1 Tax=Patiria ... [more]
A0A835ZJS0_9STRA1.340e-4359.86Tubulin folding cofactor D n=1 Tax=Tribonema minus... [more]
A0A2H6N9H2_MICLE2.120e-4359.26Uncharacterized protein (Fragment) n=1 Tax=Micruru... [more]
H3A984_LATCH7.080e-4360.00Uncharacterized protein n=2 Tax=Latimeria chalumna... [more]
A0A3M6UA48_POCDA1.030e-4261.24Uncharacterized protein (Fragment) n=1 Tax=Pocillo... [more]
A0A6G1RVN5_9GRUI1.090e-4261.36Tubulin folding cofactor D (Fragment) n=5 Tax=Neog... [more]
UPI00145820B71.160e-4260.47tubulin-specific chaperone D-like n=1 Tax=Pecten m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033162Tubulin-folding cofactor DPANTHERPTHR12658BETA-TUBULIN COFACTOR Dcoord: 50..130
IPR021133HEAT, type 2PROSITEPS50077HEAT_REPEATcoord: 63..100
score: 8.859
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 55..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13942contigEcto-sp13_S_contig13942:2300..3530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13942.3080.1mRNA_Ecto-sp13_S_contig13942.3080.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13942 2285..3530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13942.3080.1 ID=prot_Ecto-sp13_S_contig13942.3080.1|Name=mRNA_Ecto-sp13_S_contig13942.3080.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
MLVKLLQRVGTTYVPPRVVAWRYRRGQRSLLQVRGGSFLGPATAAIVAEE
EEEVDVPEELEDIVEALLCGLRDRDTVVRWSAAKGIGRITERLPRELADD
VVCSVLDLFVEAEWDGAWHGGCLALAELAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033162TBCD
IPR021133HEAT_type_2
IPR016024ARM-type_fold