mRNA_Ecto-sp13_S_contig13939.3076.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13939.3076.1
Unique NamemRNA_Ecto-sp13_S_contig13939.3076.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: D7FMA5_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA5_ECTSI)

HSP 1 Score: 805 bits (2080), Expect = 1.810e-278
Identity = 427/450 (94.89%), Postives = 432/450 (96.00%), Query Frame = 2
Query:  446 MAASTEGGAGDNKTAAATMEKKRQSGSGREKKRSHSSQSSQANDGRHVEGGNIAQSNAGTASSAGLATSFSEGRDRKHHRXXXXXXXGSKGATGAKANKHSTHGADTSSDTEAGGQEDKLKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEEVSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRPQGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQALRKEAGDENPSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQV 1795
            MAAS EGGAGDNKTAA T+EKKRQSGSGR KKRSHSSQ   AND  H EGGNIAQSNA TASSAGLATS S+G DRKHH XXXXXXXGSKGATGA ANKH+THGADT+SDTEAGGQEDKLKLLV+FIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGA DCVDYLEEVSAPGASSTATIKFS GRGGIVTSSGVEASSTGFVREDSFDT DGDDFRPQGNAT AIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQALRKEAGDENPSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQV
Sbjct:    1 MAASIEGGAGDNKTAATTVEKKRQSGSGRAKKRSHSSQ---ANDAHHGEGGNIAQSNAATASSAGLATSCSDGNDRKHHXXXXXXXXGSKGATGATANKHNTHGADTASDTEAGGQEDKLKLLVEFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGATDCVDYLEEVSAPGASSTATIKFSTGRGGIVTSSGVEASSTGFVREDSFDTEDGDDFRPQGNATSAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQALRKEAGDENPSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQV 447          
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A482SRH0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRH0_9ARCH)

HSP 1 Score: 198 bits (503), Expect = 2.210e-51
Identity = 123/354 (34.75%), Postives = 184/354 (51.98%), Query Frame = 2
Query:  803 LKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEEVSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRPQGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQALRKEAGDE------------------NPSPH-----LQQWLRQQTHKARLIAFLGRHDPLKLMQV 1795
            + +L+ FIP+ G GD   D++VRS LS+   E++  +D+YGNTLL+LACQYRC+ L  +++ +G    + +AVN+ GA  LHFACY+DS     A +LL+ GA P+V E  YGCTPLHY AG+GD+  CK +++ GA+ N +D Y YT VDYA+++G  DC ++L++     A     +KF+            +++ TG                      GA+         +   +F    ET  ED    +W    DPDSG  YY++ K+GE +WE +L  +  A  K+                      +P P       +  L  Q  +ARLIAFL +HDP +L+ +
Sbjct:  104 VDVLLQFIPFYGQGDPANDSIVRSALSSLSIEDIDAKDEYGNTLLLLACQYRCEDLARIMINKGA---NPNAVNTAGASCLHFACYQDSSSLPIAKVLLQNGANPDVAESNYGCTPLHYCAGSGDLEFCKLILQYGAQINAYDYYNYTCVDYAREAGFHDCANFLQKKLDKTA-----VKFN------------QSTKTG----------------------GAL---------KATQSFRNN-ETSYED--MSYWESHVDPDSGGKYYIHTKSGECLWEAELKERINAYSKQQNFREGXXXXXXXXNLLSMKFSSPLPADKPKISEAALISQATEARLIAFLSKHDPARLVDI 403          
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A835YY32_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY32_9STRA)

HSP 1 Score: 168 bits (425), Expect = 8.910e-46
Identity = 87/153 (56.86%), Postives = 107/153 (69.93%), Query Frame = 2
Query:  812 LVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQS 1270
            L DFIPY G GDA+ D  VR+++ AA  EEL G D YGNTLLILA QY+   L+  ILA+    IDV+AVN  GACALHFAC+  S+    A  L+  G++  VVE+TYGCTPLHYAAG+G V+LCK L+  GA   T D + YTAVDYA+Q+
Sbjct:    1 LFDFIPYYGAGDASVDGRVRAMVQAAGQEELCGIDHYGNTLLILAAQYKAGELMHAILAKD--CIDVNAVNDAGACALHFACFSASLDVLVARALIANGSKVRVVERTYGCTPLHYAAGSGHVDLCKDLVAAGAIVATCDFHNYTAVDYARQA 151          
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: D7FPK2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK2_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 2.700e-43
Identity = 119/352 (33.81%), Postives = 168/352 (47.73%), Query Frame = 2
Query:  791 QEDKLKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEEVSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRPQGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQ----ALRKEAGDEN-------------PSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQV 1795
            +++ ++ L   +P+ G  D   D MV++ L++   + +  R++ G+TLLILACQ+ C+ LV  ILA+G    +  AVN+ G CALH+ C+ DS+    A  LL RGAE    E TYGCTPLHYAA +GD  +C  L+E GA+  T D Y YTAV YAK +G    V+                      GG     G E     +   D+ D         +G A+G                              G W R  DP + +AYY+N++TGES WE DL A A+     +   AG  N             P   +++WL Q+  ++ L+A   R DPLKLM+V
Sbjct:   58 KDETMRTLFGLVPFYGGDDGPMDQMVKATLASVRPDAIDVRNEAGDTLLILACQHGCEDLVEPILAKGA---NPTAVNAVGICALHYTCFADSLSYDAAEALLWRGAETSTAETTYGCTPLHYAASSGDAEICALLVEHGAQPKTQDYYNYTAVKYAKDAGHEHVVELF--------------------GGEEEGEGWEEVEEAYTGMDTGD---------EGEASGPTG---------------------------GLWIRHIDPQTELAYYMNDETGESWWETDLQAVAKEFLATVPATAGSVNGSKTGAVSASITLPPLGVREWLVQEQVRSWLVAIFSRADPLKLMEV 350          
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A7S3HTU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTU3_9STRA)

HSP 1 Score: 176 bits (445), Expect = 7.560e-43
Identity = 111/330 (33.64%), Postives = 159/330 (48.18%), Query Frame = 2
Query:  878 LSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEEVSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRPQGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQ---------------------ALRKEAGDENP--SPHLQQW-LRQQTHKARLIAFLGRHDPLKLMQV 1795
            LSA   E++  +D+YGNTLL+LACQYRC+ LV ++L +G    D +AVNS GAC LHFACY++S     A +LL+ GA+P+V E T+GCTPLHY AG GD+  CK L+  GA+    D Y YT VDYA ++G  +   +L++  +    +T                 +  SS   +   S         +P GN+       W   +                           DPDSG  YY++ KTGE +WE +L  + Q                      +R  A  E P  +P + +  L +Q  +ARL+ F   HDP +L++V
Sbjct:    2 LSALSVEDIDSQDEYGNTLLLLACQYRCEDLVRIMLNKGA---DANAVNSSGACCLHFACYRESASIGVAKILLKSGADPDVAESTFGCTPLHYCAGTGDIEFCKLLLSYGAQIGALDYYNYTCVDYASEAGMTEVAAFLQKKLSAATKAT-----------------MGQSSKNLMSPSS---------KPYGNSNTIDIANWESHI---------------------------DPDSGGKYYIHMKTGECLWESELKQRIQQYQVQVGASRDENDRAGKNDDGIRVRAASETPDKAPKISEADLIRQATQARLVVFFTTHDPSRLVEV 275          
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A6H5L077_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L077_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 7.040e-35
Identity = 118/391 (30.18%), Postives = 169/391 (43.22%), Query Frame = 2
Query:  791 QEDKLKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKA-----------------------------------LVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKAN----TWDLYQYTAVDYAKQSGAIDCVDYLEEVSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRPQGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQ----ALRKEAGDEN-------------PSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQV 1795
            +++ ++ L   +P+ G  D   D MV++ L++   + +  R++ G+TLLILACQ+ C+                                    LV  ILA+G    +  AVN+ G CALH+ C+ DS+    A  LL +GAE    E TYGCTPLHYAA +GD  +C  L+E GA+      T D Y YTAV YAK +G    V+ L                           G E    G+  E+  +   G     +G A+G                              G W R  DP + +AYY+N++TGES WE DL A A+     +   AG  N             P   +++WL Q+  ++ L+A   R DPLKLM+V
Sbjct:    8 KDETMRTLFGLVPFYGGDDGPMDQMVKATLASVRPDAIDVRNEAGDTLLILACQHGCEVRLVETYRLRQPHAGLKTTLCSSVLECGFHKFQALDLVEPILAKGA---NPTAVNAVGICALHYTCFADSLSYDAAEALLWKGAETSTAETTYGCTPLHYAASSGDAEICALLVEHGAQPKASNATQDYYNYTAVKYAKDAGHEHVVELL---------------------------GGEEEGEGW--EEVEEAYTGMGTGEEGEASGPTG---------------------------GLWIRHIDPQTELAYYMNDETGESWWETDLQAVAKEFLATVPATAGGVNGSKTGAVSASITLPPLGVREWLVQEQVRSWLVAIFSRADPLKLMEV 339          
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A7S0XEW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEW9_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.840e-32
Identity = 63/123 (51.22%), Postives = 86/123 (69.92%), Query Frame = 2
Query:  938 ILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEEV 1306
            +LACQY+C+ LV +++ +G    D +AVN+ G  +LHFACY++S     A LLL+ GA PEV E TYGCTPLHY AG GD+  CK LI  GA+ NT+D Y YT +DYA+++G I  V Y +++
Sbjct:    1 LLACQYKCEDLVRIMINKGA---DPNAVNNLGVSSLHFACYRESSSINIAKLLLQFGANPEVKESTYGCTPLHYCAGTGDLPFCKLLITYGAQTNTYDFYNYTCIDYAREAGVIPLVLYFQQI 120          
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A2R5GRD7_9STRA (Ankyrin repeat domain-containing protein 27 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRD7_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 5.580e-13
Identity = 53/139 (38.13%), Postives = 73/139 (52.52%), Query Frame = 2
Query:  800 KLKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAIDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAK 1216
            +  +L+  +P    GD   D ++   +  AD       D  GNTLLI A ++    LV   L RG     V+A NS G  ALHFACY+ S   + A  LLE GA+P++++  +G +PLHYAA  G V L   L+   AK
Sbjct:  235 RSSVLLSLVPLAETGDGEVDELLGESMKEADPATC---DAEGNTLLIKAVEFGKPGLVRAALRRGCA---VNAQNSHGFAALHFACYRSSASTKVAKRLLEAGADPDILDN-HGVSPLHYAAAEGSVALLALLLFYKAK 366          
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: S5UHV7_9TELE (Cdkn2a/b (Fragment) n=11 Tax=Xiphophorus TaxID=8082 RepID=S5UHV7_9TELE)

HSP 1 Score: 53.9 bits (128), Expect = 1.010e-5
Identity = 30/72 (41.67%), Postives = 41/72 (56.94%), Query Frame = 2
Query: 1085 AVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLE 1300
            A LLL RGA+P V +K+ G TPLH AA  G ++  + L++ GA     D      +D A+Q+G  D V  LE
Sbjct:    2 ARLLLTRGADPNVTDKSTGATPLHDAARTGFLDTVQLLVKAGADPQARDKDNCLPIDSARQNGHTDVVAVLE 73          
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Match: A0A7S0SWI8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWI8_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 6.080e-5
Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 2
Query:  803 LKLLVDFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYR 958
            + +L  FIP+ G G+ + D +VR+ LS     ++  RD YGNTLL+LACQY+
Sbjct:  176 MDVLFQFIPFYGQGNLSNDAIVRAALSNLSIADIDSRDAYGNTLLLLACQYK 227          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13939.3076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FMA5_ECTSI1.810e-27894.89Kinesin motor domain-containing protein n=2 Tax=Ec... [more]
A0A482SRH0_9ARCH2.210e-5134.75Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A835YY32_9STRA8.910e-4656.86Ankyrin repeat-containing domain protein (Fragment... [more]
D7FPK2_ECTSI2.700e-4333.81Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A7S3HTU3_9STRA7.560e-4333.64Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A6H5L077_9PHAE7.040e-3530.18Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A7S0XEW9_9STRA4.840e-3251.22Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A2R5GRD7_9STRA5.580e-1338.13Ankyrin repeat domain-containing protein 27 n=1 Ta... [more]
S5UHV7_9TELE1.010e-541.67Cdkn2a/b (Fragment) n=11 Tax=Xiphophorus TaxID=808... [more]
A0A7S0SWI8_9STRA6.080e-546.15Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13939contigEcto-sp13_S_contig13939:935..4547 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score817.0
Seed ortholog evalue4.5e-234
Seed eggNOG ortholog2880.D7FMA5
Model size1795
KEGG koko:K10406
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.proteasome regulatory particle assembly
EggNOG OGsCOG0666@1,COG5059@1,KOG0239@2759,KOG4412@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-17_003680.1
Cds size1392
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13939.3076.1prot_Ecto-sp13_S_contig13939.3076.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13939 1338..4547 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462743.9825506-UTR-Ecto-sp13_S_contig13939:934..13371681462743.9825506-UTR-Ecto-sp13_S_contig13939:934..1337Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13939 935..1337 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462743.9964793-CDS-Ecto-sp13_S_contig13939:1337..17991681462743.9964793-CDS-Ecto-sp13_S_contig13939:1337..1799Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13939 1338..1799 +
1681462744.0043519-CDS-Ecto-sp13_S_contig13939:2066..23411681462744.0043519-CDS-Ecto-sp13_S_contig13939:2066..2341Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13939 2067..2341 +
1681462744.014433-CDS-Ecto-sp13_S_contig13939:2854..30451681462744.014433-CDS-Ecto-sp13_S_contig13939:2854..3045Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13939 2855..3045 +
1681462744.022523-CDS-Ecto-sp13_S_contig13939:3629..39191681462744.022523-CDS-Ecto-sp13_S_contig13939:3629..3919Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13939 3630..3919 +
1681462744.0305595-CDS-Ecto-sp13_S_contig13939:4373..45471681462744.0305595-CDS-Ecto-sp13_S_contig13939:4373..4547Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13939 4374..4547 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13939.3076.1

>prot_Ecto-sp13_S_contig13939.3076.1 ID=prot_Ecto-sp13_S_contig13939.3076.1|Name=mRNA_Ecto-sp13_S_contig13939.3076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=464bp
MVSSRIAPSETGENMAASTEGGAGDNKTAAATMEKKRQSGSGREKKRSHS
SQSSQANDGRHVEGGNIAQSNAGTASSAGLATSFSEGRDRKHHRRRHRHR
HGSKGATGAKANKHSTHGADTSSDTEAGGQEDKLKLLVDFIPYVGLGDAT
RDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGA
IDVDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPL
HYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGAIDCVDYLEE
VSAPGASSTATIKFSPGRGGIVTSSGVEASSTGFVREDSFDTVDGDDFRP
QGNATGAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMA
YYLNEKTGESMWEKDLLAQAQALRKEAGDENPSPHLQQWLRQQTHKARLI
AFLGRHDPLKLMQV
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mRNA from alignment at Ecto-sp13_S_contig13939:935..4547+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13939.3076.1 ID=mRNA_Ecto-sp13_S_contig13939.3076.1|Name=mRNA_Ecto-sp13_S_contig13939.3076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3613bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13939:935..4547+ (Ectocarpus species13 EcNAP12_S_4_19m)
CATCCCCAAGCTTGGTAAGGAAGCAACAACAGTGACCAGGAGCAGGTGGA TATGTTGTGTGCATCAAGGAGACATCGCACAGATCCACCAAAACAAGTAG GATACCGCATGCTCTGTAGGTCATGAGCCAGAGGCCAGTGTCGTATTCCG GCCGACGAAGAAAGGGGAGACGTCCCAGGAAACCCAGAATCACACAACGG CAGGGCGCGATCACACGTAGGATACTCGTAGCTATCTGAGGCACGGACAA GACCCAGCAAGGCCAACCGGCCCAGAACGAGAGAGGCAACGCAAGCCTTT TATTGGGGGAAGAGTCGGCTTCCAACACAGCGAATAGATATATCGACGGA ACCGTCATCGTTAGACTGCTGTACAACTCTACATCAGCAGTATTTGTAGC GTGATGGTGTCCAGCAGAATTGCTCCTTCCGAGACTGGCGAAAACATGGC CGCATCAACAGAAGGTGGTGCTGGAGACAACAAGACCGCGGCCGCCACGA TGGAGAAGAAGAGACAGAGCGGTAGCGGCCGGGAAAAAAAACGTTCACAT TCGTCACAGTCGTCACAGGCAAATGACGGTCGTCATGTGGAAGGGGGAAA CATTGCCCAATCGAACGCTGGTACGGCGTCCTCCGCTGGTCTTGCGACGT CTTTCTCAGAGGGAAGAGACAGAAAGCACCACCGCCGACGCCACCGCCAT CGCCACGGGTCCAAGGGTGCTACAGGGGCCAAAGCCAACAAGCACAGCAC CCACGGCGCGGACACATCCTCGGATACGGAGGCTGGAGGACAAGAGGACA AGCTCAAGCTGCTCGTGGACTTCATACCCTATGTGGGACTCGGCGACGCC ACGCGAGACAACATGGTGTGTACGAGCAGGTTCTTCGTTCTCATTCGCTA TCCGATCACGCTCAAGCTTGAATATAGTGCCACTACCGTAGATAGCTGTT ACTGTAGATGCTTCACTATTTGGGAGTAACGTGCGTTGTCGTGAGCTCAT GACTGCCTTCGTCGGGTCCGTACTTGACACCACAAACAAACGTGCGAAGT ACGAATCACCCGTGGGTACAACTAAGATACGTCGCGTGCGTCCCTCGATC TATGATCATGCGACCAACTACACTGTAACCAGGTACGCTCCATACTCAGC GCTGCCGACGCGGAGGAACTTGTTGGAAGGGACGACTATGGCAACACACT CCTCATCCTCGCTTGTCAGTACCGGTGCAAGGCCCTCGTACCACTAATCT TGGCGAGGGGCGGCGGTGCCATTGACGTTGACGCGGTCAACTCTGAGGGC GCTTGCGCGCTGCACTTTGCGTGCTATAAGGATAGCGTTTGTGCACAGAC GGCCGTGCTTTTGTTAGAGCGCGGGGCTGAACCCGAGGTTGTGGAAAAAA CCTACGGGTGAGCTCATTGTTACTCTCGTCTTCACATCCCACACCAGTCC GGTCTCTACGCAGTTGTACCTTCGCGATAAGTGAACATAGCCAATCAGTA GAGAGGGCAGATCTCTGCGGTCACGGACTACTCTATGTAGACAGCAAAAC AAGATCTGACCCTCAGACCAACACGCAAACGTCCATTCCTCGAACATCTT TTGTCGAGCCATTCTACCTCTACGGCAAAGTGTGGAATTTAAAGCCCGAA GTCAGGGAGAACATTGACATTGAGGGTGATCTCGTGTTGTTGTTTACGGT GACTGTAGCTCGGGAATCACGGAAAATGGAGTGAGCTACTGTCAGCCAGG ACCAACCTCATGGTGCGGGTCACCAGGGAAGTGAGAGGGGTGTATCTTCC GGTCACTGACTGTTATGAGCGTTGAAACACCGCAAATTTCTTCAAAACGT CCGCGCGTATTTTTGAACCTCCGTCCCAAATAACTTATTTATGATGTACG TTGCACGACAACTTATAAAGGTGCACGCCGCTGCACTATGCAGCGGGGGC AGGGGACGTCAACCTCTGCAAGCGGCTAATAGAGAAAGGGGCCAAGGCGA ATACTTGGGATTTGTACCAGTACACCGCCGTCGACTACGCTAAGCAGTCC GGAGCGATAGACTGTGTGGACTATCTGGAGGAAGTTTCGGCGCCCGGAGC CAGCTCCACAGGTAAGGAAAAGGCCCAACAAGTGACGAGTAGTGGCACCC GCTGTTTCAGGCCCGAGCGCCGCGCAGTACCGCTGTCCTTCCATCAGTAT TTCCTCGCCGTTAGTGTCGTCGTTGAGGCGACATGGCGAGTTTAGAGGGG ATCTCGGAATCCCCCATTTCGTTTCCGCAGGTGTCAAGCCGTGGCGGTCT TCTTCCCGGATCCTGTGTTTTTTTCGTGGATTGGTCTCAATACGACCACA ACAATGATTGTTTTTGTGGACACCAACAAGTCGCATAGCACAGCAGGCAG GGACGGAAACACTCGGGTCTTCGAGAGTAAGGGTTTTTTAGGCCCAGCAT CCGAGAAACGATACGCAACTAATAAGGGTGATGAGGAGCTCATACAGCTA ATTTTGCTCCTGCTCAAGAAACGGCGAGAAACAAAAAGTTGTTGCTACCG TAACCGCATCCCAAAGGTGTCTGCTCTGTGGCTGCTGCAACGGGCCTATA CTGCTCTCTTTCAACAAATCCAACGCAGATACGTTCCTCGGTCGTCAAAC CTACTGGCCTGTCTACCTGTCCGTTCGTCCGTCTAAAACAAATAGCCACC ATCAAGTTCTCCCCCGGGCGTGGGGGGATCGTGACGAGCTCGGGGGTAGA GGCATCGTCGACCGGTTTCGTCCGCGAAGACAGCTTCGACACCGTAGACG GCGACGACTTTCGCCCACAAGGGAATGCCACCGGTGCTATTGCCACTGGG TGGCTGGGAATGGTGGGGCGGCAGCCGAGCGCCTTCCACGAAGGCTTCGA AACGGGAGGGGAGGACGACGGGGAGGGGTTCTGGGGGAGGCAGTGCGACC CTGATTCCGGGATGGCCTACTACCTGAACGAAAAGGTGGGTGTGGGTTCT CGTTCTCATCTCCAAGCGGTTCATGTCTATGTGACGTTTGGTCGTTAACA GTTTTGCGGGTGGAGAGGTGGAAGCGGGGAGTGTGATGCGACCGGGCGTC ACGACTGTTTTCATTCCGGAGTCAACGATGGGAGGTTGTTTTCTGCGGTT TTTATGGTCCTTTCAATATTGCAATCAAGGTGTCGGTTGGTAGGAATCGG TTGACAACATAGGACTTGGCTGTGATTCAGTTCATCGTCTAGTCTACGAC AAAATTTGCGTGTTGTCGTTGTGCGGCTGCTGTCTGCCACGCTCCTCTTC CGTCGAGAGTGTTTGAATGATTCAGGTTAACATTGGAAACACGACTAGTA AGTCCAGGATTGTCGAGTTGTTCTGATTCCTCGTTTTCCTTAGTGTGGCG AAGCAACACCGGTACCTACGTTTTGTTCTATTATATCAGACTGGAGAGAG CATGTGGGAGAAGGACCTGCTGGCGCAGGCGCAGGCTCTCCGCAAGGAGG CTGGCGACGAGAATCCCTCGCCACACCTGCAGCAGTGGCTGAGGCAGCAG ACGCACAAGGCGCGCTTGATCGCCTTCCTGGGGCGGCATGACCCTCTCAA ACTCATGCAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13939:935..4547+

>mRNA_Ecto-sp13_S_contig13939.3076.1 ID=mRNA_Ecto-sp13_S_contig13939.3076.1|Name=mRNA_Ecto-sp13_S_contig13939.3076.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1392bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13939:935..4547+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTGTCCAGCAGAATTGCTCCTTCCGAGACTGGCGAAAACATGGCCGC
ATCAACAGAAGGTGGTGCTGGAGACAACAAGACCGCGGCCGCCACGATGG
AGAAGAAGAGACAGAGCGGTAGCGGCCGGGAAAAAAAACGTTCACATTCG
TCACAGTCGTCACAGGCAAATGACGGTCGTCATGTGGAAGGGGGAAACAT
TGCCCAATCGAACGCTGGTACGGCGTCCTCCGCTGGTCTTGCGACGTCTT
TCTCAGAGGGAAGAGACAGAAAGCACCACCGCCGACGCCACCGCCATCGC
CACGGGTCCAAGGGTGCTACAGGGGCCAAAGCCAACAAGCACAGCACCCA
CGGCGCGGACACATCCTCGGATACGGAGGCTGGAGGACAAGAGGACAAGC
TCAAGCTGCTCGTGGACTTCATACCCTATGTGGGACTCGGCGACGCCACG
CGAGACAACATGGTACGCTCCATACTCAGCGCTGCCGACGCGGAGGAACT
TGTTGGAAGGGACGACTATGGCAACACACTCCTCATCCTCGCTTGTCAGT
ACCGGTGCAAGGCCCTCGTACCACTAATCTTGGCGAGGGGCGGCGGTGCC
ATTGACGTTGACGCGGTCAACTCTGAGGGCGCTTGCGCGCTGCACTTTGC
GTGCTATAAGGATAGCGTTTGTGCACAGACGGCCGTGCTTTTGTTAGAGC
GCGGGGCTGAACCCGAGGTTGTGGAAAAAACCTACGGGTGCACGCCGCTG
CACTATGCAGCGGGGGCAGGGGACGTCAACCTCTGCAAGCGGCTAATAGA
GAAAGGGGCCAAGGCGAATACTTGGGATTTGTACCAGTACACCGCCGTCG
ACTACGCTAAGCAGTCCGGAGCGATAGACTGTGTGGACTATCTGGAGGAA
GTTTCGGCGCCCGGAGCCAGCTCCACAGCCACCATCAAGTTCTCCCCCGG
GCGTGGGGGGATCGTGACGAGCTCGGGGGTAGAGGCATCGTCGACCGGTT
TCGTCCGCGAAGACAGCTTCGACACCGTAGACGGCGACGACTTTCGCCCA
CAAGGGAATGCCACCGGTGCTATTGCCACTGGGTGGCTGGGAATGGTGGG
GCGGCAGCCGAGCGCCTTCCACGAAGGCTTCGAAACGGGAGGGGAGGACG
ACGGGGAGGGGTTCTGGGGGAGGCAGTGCGACCCTGATTCCGGGATGGCC
TACTACCTGAACGAAAAGACTGGAGAGAGCATGTGGGAGAAGGACCTGCT
GGCGCAGGCGCAGGCTCTCCGCAAGGAGGCTGGCGACGAGAATCCCTCGC
CACACCTGCAGCAGTGGCTGAGGCAGCAGACGCACAAGGCGCGCTTGATC
GCCTTCCTGGGGCGGCATGACCCTCTCAAACTCATGCAGGTG
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