mRNA_Ecto-sp13_S_contig13935.3075.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13935.3075.1
Unique NamemRNA_Ecto-sp13_S_contig13935.3075.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Match: D8LTR5_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR5_ECTSI)

HSP 1 Score: 702 bits (1812), Expect = 3.120e-247
Identity = 422/489 (86.30%), Postives = 431/489 (88.14%), Query Frame = 1
Query:    1 EGQSFKSGAAAAREANPRDFYHHRNRLRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMVVGVDGDAGGDGAGERGGSGVSHGMTEYIGFVNINLVRGESLVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMSLNIDVYGGKDHIGQAQVPLRSLLLKERQSAEAGHDSSRGDRGSGLNLGGLEPASRLLDNVLATPVPAGGSCCSREASD-DGSLSFFDGGDPQEDGRPDEVEESLTSTVPSLVSSTSSGPPTLSSLSATRTAAATVPSRAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TATSPYDAGGAGVFGFAGSGALKARDSDKKVSGSGAVARVESLLGEPK 1455
            EGQSFK GAAAAREANPR+FYHHR+RLRSLLERE+NIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGN+M NSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMV GVDGDAGGDG+GERGGSG SHGMTEYIGFVNINLVRGESLVHAGF Q LQYMAVLRIGGQEVRSKWSK+SDGSPSWSEKLMLCWDGNM LNID+YGGKDHIGQAQVPLRSLLLKE QSAEAGH SSRGDRGSG NLGGLEPASRLLDNVLATPVPAG           DG LSFFDGGDPQ DGRPDEVEESLTSTVPSLVSSTS                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TATSPYDAGG GVFG AGSGALKARD DKK  G+GA ARVE+LLGEPK
Sbjct:  124 EGQSFKGGAAAAREANPREFYHHRDRLRSLLEREDNIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNKMVNSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMVSGVDGDAGGDGSGERGGSGFSHGMTEYIGFVNINLVRGESLVHAGFGQ-LQYMAVLRIGGQEVRSKWSKRSDGSPSWSEKLMLCWDGNMPLNIDIYGGKDHIGQAQVPLRSLLLKESQSAEAGHGSSRGDRGSGSNLGGLEPASRLLDNVLATPVPAGXXXXXXXXXXXDGRLSFFDGGDPQGDGRPDEVEESLTSTVPSLVSSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATSPYDAGGGGVFGLAGSGALKARDGDKKAPGAGAAARVENLLGEPK 611          
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Match: A0A6H5L6N3_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N3_9PHAE)

HSP 1 Score: 702 bits (1813), Expect = 5.710e-247
Identity = 421/480 (87.71%), Postives = 425/480 (88.54%), Query Frame = 1
Query:   19 SGAAAAREANPRDFYHHRNRLRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMVVGVDGDAGGDGAGERGGSGVSHGMTEYIGFVNINLVRGESLVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMSLNIDVYGGKDHIGQAQVPLRSLLLKERQSAEAGHDSSRGDRGSGLNLGGLEPASRLLDNVLATPVPAGGSCCSREASDDGSLSFFDGGDPQEDGRPDEVEESLTSTVPSLVSSTSSGPPTLSSLSATRTAAATVPSRAEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATSPYDAGGAGVFGFAGSGALKARDSDKKVSGSGAVARVESLLGEPKG 1458
            S  AAAREANPRDFYHHRNRLRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQV+FMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMV G DGDAGGDGAGERGGSGVSHGMTEYIGFVNINL RGESLVHAGFSQ          GGQEVRSKWSKKSDGSPSWSEKLMLCWDGNM LNIDVYGGKDHIGQAQVPLRSLLLKERQSAEAGHDSSRGDRGSG NLGGLEPASRLLDNVLATPVPAGGS  SREASDDGSLSFFDGGDP E+GR DEVEESLTSTVPSL                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATSPYDAGG GVFGFAGSGALKAR+SDKKVSGSGA ARVE+LLGEPKG
Sbjct:  168 STKAAAREANPRDFYHHRNRLRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVDFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMVSGADGDAGGDGAGERGGSGVSHGMTEYIGFVNINLARGESLVHAGFSQ---------AGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMPLNIDVYGGKDHIGQAQVPLRSLLLKERQSAEAGHDSSRGDRGSGRNLGGLEPASRLLDNVLATPVPAGGSRSSREASDDGSLSFFDGGDPPEEGRADEVEESLTSTVPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSPYDAGGGGVFGFAGSGALKARESDKKVSGSGAAARVENLLGEPKG 638          
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Match: A0A1V9Z495_9STRA (ADP-ribosylation factor GTPase-activating protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z495_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.560e-38
Identity = 95/233 (40.77%), Postives = 121/233 (51.93%), Query Frame = 1
Query:   79 LRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEF---RGKKKPVIKPPPPVDHASAMVVGVDGDAGGDGAGERGGSGVSHGMTEYIGFVNINLVRGESLVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMSLNIDVY 768
            L  +L  +EN+ CADC A  P WA+V  G F+CTQCAG HRSLGVH+S VLS  LD WT+ Q+E ++  GN   N  LE+ VP T  KPS   PRD R+AYI AKY  + F     + +++ +  P  PV   +A             A   G    SHGM EY+G + I LV G  L               R+G Q + S   K+S  +P W E L L WDG   L + VY
Sbjct:   56 LEVILALDENLQCADCNAPHPKWATVTHGGFICTQCAGVHRSLGVHLSFVLSCTLDRWTRTQLEAVSSGGNARLNETLEFSVPPTTAKPSPDWPRDPREAYIVAKYVDKAFRMGPNKRRQEAMSAPACPVARNAA-------------ASSHG----SHGMVEYVGILTIELVEGAGLAAMDVGGSSDPYVSFRLGEQAISSHCVKRSL-NPKWHETLRLSWDGVSPLVVQVY 270          
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Match: A0A1W0A2J3_9STRA (ADP-ribosylation factor GTPase-activating protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2J3_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.260e-38
Identity = 94/233 (40.34%), Postives = 122/233 (52.36%), Query Frame = 1
Query:   79 LRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEF---RGKKKPVIKPPPPVDHASAMVVGVDGDAGGDGAGERGGSGVSHGMTEYIGFVNINLVRGESLVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMSLNIDVY 768
            L+ LL  EEN+ CADCTA  P WA+V  G F+CTQCAG HRSLGVH+S VLS  LD WT+ Q++ +A +GN   N  LE+ VP    KP+   PR+ R+ YI AKY  + F     + +++ +  P  P+    A             A  +G    SHGM EYIG + I LV G +L               R+G Q + S   K S   P W+E L L WDG   L + VY
Sbjct:   42 LQELLANEENLHCADCTAMHPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSCTLDRWTREQIQHVAAIGNAKLNDTLEFSVPVNIRKPTGDCPREVREEYIVAKYVEQSFRMGPNKRRQEAMSSPSRPIARNVA-------------ASSQG----SHGMVEYIGILTIELVEGSNLAAMDVGGSSDPYVSFRLGEQVISSHCVKHSL-HPKWNETLRLSWDGISPLIVQVY 256          
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Match: A0A2D4BL46_PYTIN (ADP-ribosylation factor GTPase-activating protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BL46_PYTIN)

HSP 1 Score: 157 bits (396), Expect = 1.900e-37
Identity = 104/274 (37.96%), Postives = 144/274 (52.55%), Query Frame = 1
Query:   70 RNRLRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEF---RGKKKPVIKPPPPVDHASAMVVGVDGDAGGDG---AGERGGSGVSHGMTEYIGFVNINLVRGESLVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMSLNIDVYGGKDH--------IGQAQVPLRSL-LLKERQSAEA 846
            + RL + ++R EN  CADC A  P WASVN G F+CTQCAG HRSLGVH+S VLS  LD WT AQV+ +  +GN+  N  LE+ VP  + KP     R  R+ +I+AKY+  LF+    + +K+ V+        +SA     +  A  DG   A  R G+GV  GM E++G + I L+ G  L     + +       R+G Q + S     +D +P W + LML WDG   L  +VY   DH        +G   +   +L LL E Q  +A
Sbjct:  506 KRRLEAAMQRVENASCADCNAPAPRWASVNHGCFICTQCAGVHRSLGVHVSFVLSCTLDRWTSAQVDGVERVGNDALNETLEFSVPDDYPKPHAESSRPERERFIRAKYEDELFKVSPDKPRKRAVLSS----SSSSAPTSYAEDVAATDGNNVAARRSGTGV--GMIEFVGVMVIELLEGIDLAGVDINGKSDPYVQFRLGEQAIVSD-KVHNDVNPRWHQTLMLSWDGESPLYAEVY---DHNTIQNDRFMGSVVIDTETLRLLLEDQEVDA 769          
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Match: A0A5D6Y1N9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1N9_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.330e-36
Identity = 91/244 (37.30%), Postives = 125/244 (51.23%), Query Frame = 1
Query:   64 HHRNRLRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEF---RGKKKPVIKPPPPVDHASAMVVGVDGDAGGDGAGERGGSGVS----HGMTEYIGFVNINLVRGESLVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGS--PSWSEKLMLCWDGNMSLNIDVY 768
            +++ R+   L R EN  CADC A  P WA+V  G F+CTQCAG HRSLGVH+S VLS  LD WT AQV+ +  +GN+  N  +E+ VP+ + KP     R  R+ YI+AKY+  LF+    R K+  V                    +   G+G+R     +    HGM EY+G + I LV G  L     + +       R+G Q + S    + D S  P W + LML WDG   L +DV+
Sbjct:    7 NNKQRVLDALARPENASCADCDAPQPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSCTLDAWTDAQVQSVETVGNDALNGLMEFSVPTQFPKPHAESARSERERYIRAKYEDALFKAHPSRRKQHAVSSSSXXXXXXXXXXXXSTAVSALGGSGDRHSGATAAPATHGMVEYVGVLVIELVEGAHLAAMDMNGKSDPYVTFRLGEQSISSA---RVDNSVDPQWHQALMLSWDGRAPLEVDVF 247          
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Match: A0A1X7VMW2_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VMW2_AMPQE)

HSP 1 Score: 145 bits (366), Expect = 2.150e-36
Identity = 101/267 (37.83%), Postives = 135/267 (50.56%), Query Frame = 1
Query:   79 LRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMANSFLEYHVPSTWLKPSHLEP-RDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDH--ASAMVVGVDGDAGGDGAGERGGSGVSHGMTEYIGFVNINLVRGESLVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMSLNIDVY-----GGKDHIGQAQVPLRSLLLKERQSAEAGHD 855
            L+ LLE  EN  CADCT   PTWAS N GVF+C QCAG HRSLGV  S VLS  LD+W+K Q++FM   GN+  N+ LE+ VP T   P   E  RD RD YI+AKY  +LF  +  + P   PP  +    +S+        +  D A           M EYIG + + L+ G++L+         Y   L +G Q  +S   KK+  +P ++E     WDG   L I++Y        DH+G   V L    LK+    E  H+
Sbjct:    5 LKELLEYPENSQCADCTEPNPTWASTNWGVFICVQCAGVHRSLGVEHSFVLSCSLDNWSKEQIDFMKARGNKEMNALLEHSVPKTIEVPFGSETDRDTRDKYIRAKYIEQLFYKKEGRTP--NPPKRMKRIGSSSSRHSPPSPSLRDAA-----------MIEYIGIIEVELIEGKNLIIKDIISSDPYCK-LTVGLQSRKSTIKKKTL-NPHYNEMFSFSWDGKDKLWIEIYDHDDLSKDDHMGIVDVDLE--FLKKGDGEERSHE 254          
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Match: A0A067CVM9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVM9_SAPPC)

HSP 1 Score: 148 bits (373), Expect = 4.190e-36
Identity = 95/230 (41.30%), Postives = 113/230 (49.13%), Query Frame = 1
Query:   79 LRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMVVGVDGDAGGDGAGERGGSGVSHGMTEYIGFVNINLVRGESLVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMSLNIDVY 768
            L  LL R+EN+ CADC A  P WA+V  G F+CTQCAG HRSLGVHIS VLS  LD WT++Q+E +   GN   N  LE+ VP+   KP     RD R+ YI AKY    +     K              AM   V   A    A   G    SHGM EY+G + I LV G  LV              R+G Q + S   K+S   P W E L L WDG   L + VY
Sbjct:   60 LTDLLARDENLHCADCNAPQPKWATVTHGGFICTQCAGVHRSLGVHISFVLSCTLDKWTRSQLECVQAGGNARLNETLEFSVPTIVSKPLPDCARDARETYIIAKYVEMAYRMGPNKT----------RQEAMSSLVRPTARNAAASSHG----SHGMVEYVGILTIELVEGADLVAMDVGGSSDPYVSFRLGEQVISSHCVKQSL-HPKWRETLRLSWDGQSPLVVQVY 274          
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Match: H3H0T7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H0T7_PHYRM)

HSP 1 Score: 146 bits (368), Expect = 1.240e-34
Identity = 91/240 (37.92%), Postives = 119/240 (49.58%), Query Frame = 1
Query:   70 RNRLRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMANSFLEYHVP-------STWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMVVGVDGDAGGDGAGERGGSGVSHGMTEYIGFVNINLVRGESLVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMSLNIDVY 768
            ++RL ++L R EN  CADC A  P WA+V  G F+CTQCAG HRSLGVH+S VLSV LD WT  QV+ M  +GN   N  LE  +         T  KP    PR  R+ +I+AKY+ RLF       P  KPP P   +                        + GM EY G V I+L   + L     S +       R+G Q + SK    S  +P W+++LML WDG   L +++Y
Sbjct:  153 KSRLFAVLRRPENDQCADCGAATPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSVMLDKWTDDQVKTMDTIGNTKLNQQLERTLSLQLRLNAQTPKKPEAQTPRADRERFIRAKYEDRLFSGGVNNSPP-KPPSPAKRSPTKAAAT-----------------TQGMVEYTGVVVIDLKEAKELAGMNISGKSDPYVTFRLGEQSISSKRVDNSV-TPQWNQQLMLSWDGTSPLEVELY 373          
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Match: A0A024TJ16_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJ16_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.370e-34
Identity = 89/233 (38.20%), Postives = 118/233 (50.64%), Query Frame = 1
Query:   79 LRSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEF---RGKKKPVIKPPPPVDHASAMVVGVDGDAGGDGAGERGGSGVSHGMTEYIGFVNINLVRGESLVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMSLNIDVY 768
            L +LL  ++N  CADC A  P WA++  G F+CTQCAG HRSLGVHIS VLS  LD WT +Q+  +   GN   N  LE+ VP++  KP     RD R AYI+ KY  + F     + +++P++  P      +   V V                 S GM EY+G V I L+ G SL     +         R+G Q + S   K S  +PSW+E L L WDG   L + VY
Sbjct:   69 LGALLALDDNEHCADCQALHPKWATITYGGFICTQCAGVHRSLGVHISFVLSCTLDKWTPSQLAAVVNGGNTKLNDHLEFSVPNSVRKPDADAMRDDRAAYIQLKYVEQAFRMGPNKRRQEPILASPTTTPIHAPRQVAVSSHG-------------SCGMVEYVGIVTIELLEGSSLAAMDVNGSSDPYVSFRLGDQVISSHAVKHSL-NPSWNETLRLSWDGQSPLVVQVY 287          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13935.3075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTR5_ECTSI3.120e-24786.30Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L6N3_9PHAE5.710e-24787.71Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A1V9Z495_9STRA1.560e-3840.77ADP-ribosylation factor GTPase-activating protein ... [more]
A0A1W0A2J3_9STRA2.260e-3840.34ADP-ribosylation factor GTPase-activating protein ... [more]
A0A2D4BL46_PYTIN1.900e-3737.96ADP-ribosylation factor GTPase-activating protein,... [more]
A0A5D6Y1N9_9STRA1.330e-3637.30Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1X7VMW2_AMPQE2.150e-3637.83Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A067CVM9_SAPPC4.190e-3641.30Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
H3H0T7_PHYRM1.240e-3437.92Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A024TJ16_9STRA1.370e-3438.20Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13935contigEcto-sp13_S_contig13935:145..4488 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score704.5
Seed ortholog evalue3.4e-200
Seed eggNOG ortholog2880.D8LTR5
Model size1461
KEGG koko:K12486
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.GTPase activator activity
EggNOG OGsCOG5347@1,KOG0703@2759
Ec32 ortholog descriptionArf GTPase activating protein
Ec32 orthologEc-28_003110.1
Cds size1461
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13935.3075.1prot_Ecto-sp13_S_contig13935.3075.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13935 145..4488 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462743.874522-CDS-Ecto-sp13_S_contig13935:144..8131681462743.874522-CDS-Ecto-sp13_S_contig13935:144..813Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13935 145..813 -
1681462743.8894424-CDS-Ecto-sp13_S_contig13935:1319..14871681462743.8894424-CDS-Ecto-sp13_S_contig13935:1319..1487Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13935 1320..1487 -
1681462743.8984244-CDS-Ecto-sp13_S_contig13935:2633..28701681462743.8984244-CDS-Ecto-sp13_S_contig13935:2633..2870Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13935 2634..2870 -
1681462743.9104848-CDS-Ecto-sp13_S_contig13935:3248..33711681462743.9104848-CDS-Ecto-sp13_S_contig13935:3248..3371Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13935 3249..3371 -
1681462743.923851-CDS-Ecto-sp13_S_contig13935:3714..37781681462743.923851-CDS-Ecto-sp13_S_contig13935:3714..3778Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13935 3715..3778 -
1681462743.9336276-CDS-Ecto-sp13_S_contig13935:4070..41871681462743.9336276-CDS-Ecto-sp13_S_contig13935:4070..4187Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13935 4071..4187 -
1681462743.9436786-CDS-Ecto-sp13_S_contig13935:4405..44881681462743.9436786-CDS-Ecto-sp13_S_contig13935:4405..4488Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13935 4406..4488 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13935.3075.1

>prot_Ecto-sp13_S_contig13935.3075.1 ID=prot_Ecto-sp13_S_contig13935.3075.1|Name=mRNA_Ecto-sp13_S_contig13935.3075.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=487bp
EGQSFKSGAAAAREANPRDFYHHRNRLRSLLEREENIVCADCTAKLPTWA
SVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNEMA
NSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPP
PPVDHASAMVVGVDGDAGGDGAGERGGSGVSHGMTEYIGFVNINLVRGES
LVHAGFSQQLQYMAVLRIGGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMS
LNIDVYGGKDHIGQAQVPLRSLLLKERQSAEAGHDSSRGDRGSGLNLGGL
EPASRLLDNVLATPVPAGGSCCSREASDDGSLSFFDGGDPQEDGRPDEVE
ESLTSTVPSLVSSTSSGPPTLSSLSATRTAAATVPSRAEGGGAAAPSPAP
SIEVAAVPSATTTTDETKTPSALTTVESGGGGGGGNSTATSPYDAGGAGV
FGFAGSGALKARDSDKKVSGSGAVARVESLLGEPKG*
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mRNA from alignment at Ecto-sp13_S_contig13935:145..4488-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13935.3075.1 ID=mRNA_Ecto-sp13_S_contig13935.3075.1|Name=mRNA_Ecto-sp13_S_contig13935.3075.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4344bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13935:145..4488- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGGGCAGAGTTTCAAAAGCGGGGCGGCGGCAGCGAGAGAGGCGAACCC GCGAGATTTCTATCACCATCGGAATCGGTTGAGGTGGGGAGGCAGGCGGG CATTGAAACCCTCCTCGACGTTGTCGCTTAACGCCTGTTTGTTTGTGGGG TCCACGGGTGTTGCGTAGGTCCTGAGGTGTTGTATATCCCCCCCCCTTTT TGTCGTCACACAACAGTCTCGAAGAGAAGTTCACTCACAGGAGGATACAA TTTCGCGCCTGTTGTGTGACTCGTGGGTATCGAAACCGGGCGTGTGCGCA GGTCGCTGCTGGAGCGAGAGGAAAACATCGTGTGCGCGGACTGCACAGCG AAGCTCCCTACCTGGGCCAGCGTTAATACGGGAGTCTTCCTCTGCACGCA ATGCGCAGGTTGCCACAGGTAAGGGAAACAGGAAAGGCCCAAGCGACGCA CCCGCAGGCCAGCGGTTAGGTGATGTAAGGCAACAACGCAGTGGCAGCCT CTTGTGGCGAAGCGGGTAAAAGTTGGGGTGAGTATCCCTATCCCTCAAAC CTAAGTCTATGCCTAGGTAAAACTCGAGCACGTCCCAGCGCGGCCGCGCT CGGCCGGGAAAAAGGAAGGGGGGACGGTACGCACCGACCTCACGTGCGAG AACGCCGCAACTGACGTGGAGATAACCGCTTCCTATATTCTCTTGTGCGG CATGTTGCAGGTCGTTGGGAGTTCACATCTCGAAGGTGCTCTCCGTACAA CTGGACGACTGGACGAAGGCACAGGTGATGATAATTCAAAAGCCTAAGGC ACAGCGTTAAGCAGGGCTGCCGCCTTGCGCTCGTTTGGTTCTCAACGATA GATGTGGTCAGCTCTCCACGCCGGACCACGCCACACGCACAGTAGTCGGT TCGCCCGTGACGTACGGGAGTCTTCCGAGTTCTTGACCTGCAACTCTGCA AAACATGACCCCGTGCTCGTTGTTCGTCGTACAAAGTACGGCGGCGACGT GACACGCTCCATTGTCAATCTTACGCAAACGTCAGCTCTTCGTCGATCTA GCCGCATCTAGCTTGAAACCTGTGTCCCCTCGCAATTCGCCCCCCTCCCA AAACCGCGTTTTCCTAGGTGGAGTTCATGGCGGGAATGGGCAACGAAATG GCGAACTCGTTCCTCGAATACCACGTGCCCAGCACCTGGCTCAAGCCTAG CCATCTCGAGCCCAGGGACTACAGAGACGCCTACATCAAGGTGGGTGCGA CGGAGGGTGGGCTTGACGGTCTCTTGCTGCACCCTGTGTGTCGTCTAGGT CGGTTTTCTCCCCCTTCCGGTAGACCGCGGCGAAACGGGGAGTGAATCGC CCGAGGTCTACTTGACGCAGACAATGCCAAACCTTGTGGCCTGATTGTGA ACTGGACGATGTTTCTCGCCCGTCGGACGTTCCACTTTCTTGGGCGTCGC GCCTTCTCTGCCTTCCCCCACATGTTTGAAACGCCGTTCCACCGCTTCCT CTTGGATAACACCTCTTCTCCAACCTAGCAAAGTCACACCAGCAGCAGGG TACAAAGGAGATTCTTATTGACCTTAGTTACCGCCTCTTTTCGACCCCCC ATCGACCACAACCACCAGGCCAAGTACCAGAGCCGGTTGTTCGAGTTTCG GGGGAAGAAAAAGCCGGTAATCAAGCCTCCCCCGCCGGTGGATCACGCCT CGGCGATGGTGGTAGGGGTGGACGGAGACGCGGGCGGGGATGGGGCCGGG GAGCGGGGCGGGTCGGGGGTGTCGCACGGCATGACGGAGTACATCGGCTT CGTGAATATTAATCTTGTGCGGGGGGAGAGCCTCGTCCACGCTGGGTTCA GCCAGGTGTGTACAAGAGGGCGGGGGAAGACATGCAGAGAGAAAACGATG GACTGACAGACGGACTGACAGACAGACACATAGACAGACAGACAAACAGA CAGACAGACGACAGAAAGACCGGAAGAATAGAAGGTGTAGGACAAGGAAA GAAGCTTGCTGTGTTGGCTTGCCCCGACGTCGTTCGCGCAGGCAGGTATT TAGGCAGGCTTGCAACAAGCGGCGCGAAGGCGATTTTCAGAGCTGGGCTA GTTTGTAGACAACGTCGATCGGCCACTAGAGCTCCTCGGAAATGCTGTGA AATGCTCAACGACTTCCTAATCTAGCTGTTCATGATGAAACAGCGTGTTA CACACGCTCATCGCCACTAGAATAATTTTACCCGCCACGCTTTTCCAGCG GACCCCTGATAACACCCCCACACCACCATGACCGTGAGGGGCAAGAACGA AATGGGTTCTGCACCCTGAAGCTCGCGCGACTTACCGCAGTTCGATCTGT GGTGGTGTTTTTTCGTGTCCAGTCAAGTCTGATGGCGAGCTTTTGAACGT AGGCGGTGGCACACCATTTTGACGCCCTACACTTCTCTCTAGCAGCGCGA AGGTTGTTACGTCCTAACCGCGAGTCCGGTCACACAACAGAAGCGTCGCT GAGTGACTGCGTTGGTAACACCGTCAAGACGTTTGTAGCTCTCTCTGGGC AGTGGAATCGAAACATCTCTGGGGTGAAGACAAACCGCAATACAGATGTG AAAGACGCAAAAATTCTTATGCACAGACATTCACTGAAGAGGGAACGGGT TTGTTGGACTCTCCTCGCGTGAAAAGTAAAGCGCGGCAGGGGGAAACGTG GATCGAGCGGAAGAAACGAGTCTCCAAAGGCAGAGTATAGAGTTTAGATG CTTTGCGGTATTTGTTGTCGTAGCAGCTTGGAAAGCAAAGTGTCCGCCGA CCCATACTTTCCATTTCTCACCATGCGCCGTACCTCACGGAACATTTGGC GTTTTGCGTGACCTTCGACTCTCCCCCAAACAACAGTTGCCGATATCGCC CCTTCGAGATTTGGATCTGATCCTTGCAAGCCTCCCATTCAACCGTTGCT CGGTCTGTGTGTGTCTTGCGGCAATGCTGTGTTCCGCTTTTCTGGTGAGA GCAGCTGCAGTACATGGCTGTGCTAAGAATAGGCGGGCAGGAGGTGAGGT CGAAATGGTCGAAGAAGTCGGACGGGTCGCCTTCTTGGTCAGAGAAGCTC ATGCTCTGCTGGGACGGCAACATGTCGCTCAACATCGACGTGTACGGGGG CAAGGATCATATTGGTCAGGTGAGATCTGGCTTTTGCTCTTCATCCTGTT CCCCCCGAATGTCGTCGGCGCTGACGGTGTCTGTCTTGTTGTTTTTTGTT AGTCTGTTATCTTGGTTATTCGTGTGGTGCTGCTTGTTGCCGTTTGTCTC TGCTCTTTCTTGTATCTTGTCGTCTATGAAAAACAACATGCTTCTTCCGT TGATCCTCTCGTGAGAGCCGTTGCCGCTGGTTCCAATTTGCGCAAGGATG GTGTCACACGCGCCTTCTCGAGCAATTCTCAGAGCCGGGAGGTCATATTC TGCTATCTAGGGGGGTTACTGTCTGCTATACCTACGTCGGTGGCGCGGGG CGTGCCAACCGCGCGTAGTTTTAGAATCTCCCATCGCGCCCCGGCTGCAG CATCCCGAACCAGACACCCCAGGTCGTTGTGAGCTAGTCCTCGAACCCTT GGAAAACGGCCCCCGTCATTACCCTCCGCGTGACACCCCCAACTCCCCGG GTCGGCCGTAACCTACTTACACCAGGCGCAAGTCCCGCTGCGCAGCCTGC TCCTCAAGGAGAGGCAATCAGCAGAAGCTGGGCACGACTCGAGCCGTGGC GACAGAGGCAGCGGTCTCAACCTGGGGGGCTTGGAGCCGGCGTCCCGCCT CCTGGACAACGTGCTCGCGACTCCGGTGCCCGCCGGCGGTAGCTGCTGCA GTCGCGAGGCTAGCGATGACGGTAGCCTGAGCTTCTTCGACGGCGGTGAC CCCCAGGAGGACGGTCGGCCGGACGAGGTGGAAGAGAGCCTCACCAGTAC GGTTCCGTCCCTAGTGTCTAGCACCAGCTCGGGGCCGCCGACCCTCAGCT CGCTGTCGGCGACCAGAACCGCAGCGGCCACGGTGCCCTCCAGGGCGGAG GGCGGCGGGGCGGCGGCCCCCAGCCCGGCGCCGAGCATCGAGGTGGCAGC GGTACCGTCGGCAACAACAACAACGGACGAAACGAAGACCCCGTCGGCGC TAACGACCGTCGAAAGCGGCGGCGGGGGCGGCGGAGGTAACTCCACGGCG ACTTCCCCGTACGATGCCGGCGGTGCGGGAGTTTTCGGCTTTGCGGGGAG CGGCGCCCTCAAGGCCCGCGACAGCGACAAGAAGGTGTCGGGGTCTGGCG CGGTGGCCCGCGTGGAGAGCTTGCTGGGAGAACCGAAGGGGTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13935:145..4488-

>mRNA_Ecto-sp13_S_contig13935.3075.1 ID=mRNA_Ecto-sp13_S_contig13935.3075.1|Name=mRNA_Ecto-sp13_S_contig13935.3075.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1461bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13935:145..4488- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGGGCAGAGTTTCAAAAGCGGGGCGGCGGCAGCGAGAGAGGCGAACCC
GCGAGATTTCTATCACCATCGGAATCGGTTGAGGTCGCTGCTGGAGCGAG
AGGAAAACATCGTGTGCGCGGACTGCACAGCGAAGCTCCCTACCTGGGCC
AGCGTTAATACGGGAGTCTTCCTCTGCACGCAATGCGCAGGTTGCCACAG
GTCGTTGGGAGTTCACATCTCGAAGGTGCTCTCCGTACAACTGGACGACT
GGACGAAGGCACAGGTGGAGTTCATGGCGGGAATGGGCAACGAAATGGCG
AACTCGTTCCTCGAATACCACGTGCCCAGCACCTGGCTCAAGCCTAGCCA
TCTCGAGCCCAGGGACTACAGAGACGCCTACATCAAGGCCAAGTACCAGA
GCCGGTTGTTCGAGTTTCGGGGGAAGAAAAAGCCGGTAATCAAGCCTCCC
CCGCCGGTGGATCACGCCTCGGCGATGGTGGTAGGGGTGGACGGAGACGC
GGGCGGGGATGGGGCCGGGGAGCGGGGCGGGTCGGGGGTGTCGCACGGCA
TGACGGAGTACATCGGCTTCGTGAATATTAATCTTGTGCGGGGGGAGAGC
CTCGTCCACGCTGGGTTCAGCCAGCAGCTGCAGTACATGGCTGTGCTAAG
AATAGGCGGGCAGGAGGTGAGGTCGAAATGGTCGAAGAAGTCGGACGGGT
CGCCTTCTTGGTCAGAGAAGCTCATGCTCTGCTGGGACGGCAACATGTCG
CTCAACATCGACGTGTACGGGGGCAAGGATCATATTGGTCAGGCGCAAGT
CCCGCTGCGCAGCCTGCTCCTCAAGGAGAGGCAATCAGCAGAAGCTGGGC
ACGACTCGAGCCGTGGCGACAGAGGCAGCGGTCTCAACCTGGGGGGCTTG
GAGCCGGCGTCCCGCCTCCTGGACAACGTGCTCGCGACTCCGGTGCCCGC
CGGCGGTAGCTGCTGCAGTCGCGAGGCTAGCGATGACGGTAGCCTGAGCT
TCTTCGACGGCGGTGACCCCCAGGAGGACGGTCGGCCGGACGAGGTGGAA
GAGAGCCTCACCAGTACGGTTCCGTCCCTAGTGTCTAGCACCAGCTCGGG
GCCGCCGACCCTCAGCTCGCTGTCGGCGACCAGAACCGCAGCGGCCACGG
TGCCCTCCAGGGCGGAGGGCGGCGGGGCGGCGGCCCCCAGCCCGGCGCCG
AGCATCGAGGTGGCAGCGGTACCGTCGGCAACAACAACAACGGACGAAAC
GAAGACCCCGTCGGCGCTAACGACCGTCGAAAGCGGCGGCGGGGGCGGCG
GAGGTAACTCCACGGCGACTTCCCCGTACGATGCCGGCGGTGCGGGAGTT
TTCGGCTTTGCGGGGAGCGGCGCCCTCAAGGCCCGCGACAGCGACAAGAA
GGTGTCGGGGTCTGGCGCGGTGGCCCGCGTGGAGAGCTTGCTGGGAGAAC
CGAAGGGGTAA
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