prot_Ecto-sp13_S_contig13934.3074.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13934.3074.1
Unique Nameprot_Ecto-sp13_S_contig13934.3074.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Match: D8LEH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH2_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 2.380e-32
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query:    2 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 59
            RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV
Sbjct:  162 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 219          
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Match: W7TLJ5_9STRA (Putative oxidoreductase yrbe n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLJ5_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 8.120e-18
Identity = 36/58 (62.07%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    2 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 59
            RR D +Y QL   V++G +G +RSV A+FRDHPVPS+EFL+ GGDIFHDL  HD DF+
Sbjct:  129 RRIDPSYVQLLQTVKEGKIGDIRSVRAVFRDHPVPSLEFLRLGGDIFHDLVVHDADFI 186          
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Match: A0A7S1FLI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FLI6_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.760e-17
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    2 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 59
            RR D  Y +L  AV +G +G VRSV A+FRDHPVP + FLK+GGDIFHDLA HD D++
Sbjct:  159 RRFDDGYRELREAVVRGEIGTVRSVAAVFRDHPVPPVAFLKEGGDIFHDLAVHDVDYI 216          
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Match: A0A7S2BJN3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BJN3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.810e-17
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    2 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 59
            RRTD  Y+ +AA V  G +GA+ S+HAIFRDHP P ++FL  GGD+FHDLA HD DF+
Sbjct:   75 RRTDPAYQAVAAEVAAGNLGAITSIHAIFRDHPCPPMKFLLAGGDVFHDLATHDIDFI 132          
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Match: A0A7R9U697_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U697_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.770e-16
Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    2 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 59
            RR D TY+ +A  V  GA+G V+ +HA+FRDHP P ++FLK+GGD FHDL  HD D++
Sbjct:  130 RRFDPTYQDVATHVASGAIGTVKKIHAVFRDHPCPDLDFLKRGGDPFHDLLVHDIDYI 187          
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Match: A0A1V9YYV7_9STRA (Oxidoreductase family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYV7_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-15
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 0
Query:    2 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 59
            RR D  Y  L  AV+  A+G V+SVH +FRDHP P +EFLK GGD FHDLA HD DFV
Sbjct:  180 RRFDPNYAALYEAVQANAIGPVQSVHTVFRDHPCPPVEFLKGGGDPFHDLAVHDIDFV 237          
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Match: A0A024U6V7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6V7_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.040e-14
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    2 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 59
            RR D  Y  L  A+   ++GAV+S+  +FRDHP P IEFLK GGD FHDLA HD DFV
Sbjct:  125 RRFDPHYVALRDAITSNSIGAVQSIQTVFRDHPCPPIEFLKSGGDPFHDLAVHDIDFV 182          
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Match: A0A1W0A6U0_9STRA (Oxidoreductase family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6U0_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.090e-14
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    2 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 59
            RR D  Y  L  AV   A+G V+S+  +FRDHP P++EFLK GGD FHDLA HD DFV
Sbjct:  554 RRFDPNYAALYDAVEGNAIGQVQSIQTVFRDHPTPAVEFLKGGGDPFHDLAVHDIDFV 611          
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Match: W4HAI4_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAI4_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.900e-14
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    2 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 59
            RR D  Y  L  A+   ++GA++S+  +FRDHP P +EFLK GGD FHDLA HD DFV
Sbjct:  125 RRFDPHYAALRDAITSNSIGAIQSIQTVFRDHPCPPVEFLKAGGDPFHDLAVHDIDFV 182          
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Match: A0A6A4ZPM1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZPM1_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.240e-14
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    2 RRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHDLAPHDCDFV 59
            RR D  Y  L  A+   ++GA++S+  +FRDHP P +EFLK GGD FHDLA HD DFV
Sbjct:  121 RRFDPHYAALRDAITSNSIGAIQSIQTVFRDHPCPPVEFLKAGGDPFHDLAVHDIDFV 178          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13934.3074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEH2_ECTSI2.380e-32100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TLJ5_9STRA8.120e-1862.07Putative oxidoreductase yrbe n=2 Tax=Monodopsidace... [more]
A0A7S1FLI6_9STRA3.760e-1762.07Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2BJN3_9STRA3.810e-1760.34Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9U697_9STRA3.770e-1655.17Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1V9YYV7_9STRA1.500e-1562.07Oxidoreductase family n=1 Tax=Achlya hypogyna TaxI... [more]
A0A024U6V7_9STRA2.040e-1458.62Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1W0A6U0_9STRA3.090e-1458.62Oxidoreductase family n=1 Tax=Thraustotheca clavat... [more]
W4HAI4_9STRA3.900e-1455.17Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A6A4ZPM1_9STRA4.240e-1455.17Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.360.10coord: 1..59
e-value: 1.5E-10
score: 42.8
NoneNo IPR availablePANTHERPTHR42840:SF3coord: 2..58
NoneNo IPR availablePANTHERPTHR42840FAMILY NOT NAMEDcoord: 2..58
NoneNo IPR availableSUPERFAMILY55347Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domaincoord: 9..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13934contigEcto-sp13_S_contig13934:3895..4555 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13934.3074.1mRNA_Ecto-sp13_S_contig13934.3074.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13934 3895..4555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13934.3074.1 ID=prot_Ecto-sp13_S_contig13934.3074.1|Name=mRNA_Ecto-sp13_S_contig13934.3074.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
RRRTDRTYEQLAAAVRKGAVGAVRSVHAIFRDHPVPSIEFLKQGGDIFHD
LAPHDCDFV
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