mRNA_Ecto-sp13_S_contig13934.3073.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Match: D8LEH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH2_ECTSI) HSP 1 Score: 190 bits (482), Expect = 9.070e-56 Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 1
Query: 160 VYATARSFLPQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFREV 435
VYATARSFLPQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFRE
Sbjct: 231 VYATARSFLPQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFREA 322
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Match: A0A7S1Z936_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z936_TRICV) HSP 1 Score: 82.8 bits (203), Expect = 5.850e-16 Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 1
Query: 160 VYATARSFLPQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFREV 435
VYAT S +LEEAG++D+A + F GAV TL M+R S YGYD R E+ G++G++S+GN + D+ G HSFPQRF
Sbjct: 53 VYATGTSSRRELEEAGIQDNATMVMKFKKGAVVTLTMSRSSTYGYDQRCEIFGDRGLVSVGNDRAHNATLSDAAGTHGPKLAHSFPQRFERA 144
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Match: M2W856_GALSU (Myo-inositol 2-dehydrogenase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W856_GALSU) HSP 1 Score: 84.7 bits (208), Expect = 5.920e-16 Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 1
Query: 160 VYATARSFLPQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFR 429
VYATA S LP+L +G+ D+A L F +GAV L+ R + YGYD R+EV G+KGMLS+ N PS+G+ + + G P SFPQR++
Sbjct: 197 VYATATSCLPELAGSGIYDTATALMEFKNGAVAMLDSARNACYGYDQRLEVFGDKGMLSVENFPSNGVTWCNENGIKKEPYVWSFPQRYQ 286
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Match: UPI00105BC3AC (inositol 2-dehydrogenase n=1 Tax=Photorhabdus tasmaniensis TaxID=1004159 RepID=UPI00105BC3AC) HSP 1 Score: 83.6 bits (205), Expect = 1.250e-15 Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 160 VYATARSFL-PQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFREV 435
+YA + + P + +AG D+A + FPSGA+ T+ +R S YGYD RIE+ GEKG+LS GN + +E +++TGC + PEH F QR+R+
Sbjct: 189 IYAQGSNLVDPAIGQAGDIDTAFIVMKFPSGAMATITNSRRSGYGYDQRIELHGEKGLLSAGNLKENSVELWENTGCLAAKPEHFFLQRYRDA 281
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Match: C7BPM0_PHOAA (Putative myo-inositol 2-dehydrogenase n=42 Tax=Photorhabdus TaxID=29487 RepID=C7BPM0_PHOAA) HSP 1 Score: 82.8 bits (203), Expect = 2.370e-15 Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 1
Query: 154 HMVYATARSFL-PQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFREV 435
+ +YA + + P + + G D+A + FPSGA+ + +R S YGYD RIE+ GEKG+LS GN + +E ++++GC T+ PEH F QR+RE
Sbjct: 187 YSIYAQGSNLVDPAIGQVGDIDTAFIVMKFPSGAIAAITNSRRSGYGYDQRIELHGEKGLLSAGNIKENSVELWENSGCLTAKPEHFFLQRYREA 281
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Match: K3WJ44_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJ44_GLOUD) HSP 1 Score: 83.2 bits (204), Expect = 2.890e-15 Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 160 VYATARSFLPQLEEAGVKDSAHCLFTFP-SGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFREV 435
VYA S P+L E V D A FP SG + T++++R + YGYD R+EV GEKGML + NPP + L + G ++ HSFP+RFRE
Sbjct: 237 VYAFGTSLSPELREVNVMDKASVWLEFPNSGVICTMDLSRSALYGYDQRVEVSGEKGMLQVVNPPKTSLVRASADGITSDVLSHSFPERFREA 329
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Match: A0A7R9U697_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U697_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.380e-15 Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 160 VYATARSFLPQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRF 426
+ + SF+P+L+E V D+A FP G V TLE R ++YGYD RIE+ G GM +GNPP S +S G +S +HSFP+RF
Sbjct: 204 ILGSGTSFMPELKEVDVMDTASLHLEFPGGVVATLEADRFASYGYDQRIEIFGTGGMAQVGNPPQSSTFLANSAGLHSSRLKHSFPERF 292
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Match: A0A068QP35_9GAMM (Inositol 2-dehydrogenase n=9 Tax=Xenorhabdus TaxID=626 RepID=A0A068QP35_9GAMM) HSP 1 Score: 81.6 bits (200), Expect = 6.360e-15 Identity = 40/93 (43.01%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 160 VYATARSFL-PQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFREV 435
+YA A + + P + AG D+A + FPSGA+ T+ +R S YGYD R+E+ GEKG+L+ GN + +EF+ +GC+ + PEH F QR+R+
Sbjct: 189 IYAQASNLVDPAIGLAGDIDTAFIVMKFPSGAMATITNSRRSGYGYDQRLELHGEKGLLTAGNIKENSVEFWGESGCTAAKPEHFFLQRYRDA 281
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Match: A0A7S1DDD5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDD5_CYCTE) HSP 1 Score: 80.1 bits (196), Expect = 8.790e-15 Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 160 VYATARSFLPQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFREV 435
VYAT S +L AGV D+A + F GA TL M+R + YGYD R E+ G+KGM+S+GN + F + G S +HSFPQRF +
Sbjct: 98 VYATGTSSTDELAAAGVHDNATMVMKFSRGATVTLFMSRSATYGYDQRCEIFGDKGMISVGNEHAHSAIFSNGDGIHQSKLKHSFPQRFNQA 189
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Match: A0A2D0L5H0_9GAMM (Dehydrogenase n=1 Tax=Xenorhabdus kozodoii TaxID=351676 RepID=A0A2D0L5H0_9GAMM) HSP 1 Score: 80.5 bits (197), Expect = 1.640e-14 Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 187 PQLEEAGVKDSAHCLFTFPSGAVFTLEMTRCSAYGYDNRIEVMGEKGMLSLGNPPSSGLEFFDSTGCSTSPPEHSFPQRFREV 435
P + AG D+A + FPSGA+ T+ +R S YGYD R+E+ GEKG+LS GN + +EF+ GC+T+ PE+ F QR+R+
Sbjct: 199 PAIGTAGDIDTAFIVMKFPSGAMATITNSRRSGYGYDQRLELHGEKGLLSAGNIKENSVEFWGENGCTTAKPEYFFLQRYRDA 281 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13934.3073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13934.3073.1 >prot_Ecto-sp13_S_contig13934.3073.1 ID=prot_Ecto-sp13_S_contig13934.3073.1|Name=mRNA_Ecto-sp13_S_contig13934.3073.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp MYSTARRFASTFFCSAAQTPPVATRPERLRALGPLHSVSSAAPDRGTPPAback to top mRNA from alignment at Ecto-sp13_S_contig13934:2194..3587- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13934.3073.1 ID=mRNA_Ecto-sp13_S_contig13934.3073.1|Name=mRNA_Ecto-sp13_S_contig13934.3073.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1394bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13934:2194..3587- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13934:2194..3587- >mRNA_Ecto-sp13_S_contig13934.3073.1 ID=mRNA_Ecto-sp13_S_contig13934.3073.1|Name=mRNA_Ecto-sp13_S_contig13934.3073.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=573bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13934:2194..3587- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |