Homology
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Match:
D8LMG1_ECTSI (Phosphatidylinositol-3-phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG1_ECTSI)
HSP 1 Score: 1213 bits (3139), Expect = 0.000e+0
Identity = 614/637 (96.39%), Postives = 623/637 (97.80%), Query Frame = 1
Query: 160 MQHGRRDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQQERTVKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGMFKAEDVPSLFIKAEEDVSKKKPGAIMLGTGAILPQLVPAPGQFQQPPTNPTLGWGQAVQQPIQTQQHMALHRSKLGPVGGGGSGAKSDGGVAVDLDPLSAFALMGPGTEGTSTSGGTESGSSVRSAGISGGATRGASRRDKQQSASRPASVQRPRESRGWLNAQPSLPGPQRALGGGSQGNHSRTDGVQKRGTPIYEDVVARPEAAAEKVTQLEMMKNEGIECLENELLVVKLQNASCEALHGKMVPGMLIMTTYKLVIIPHSTQRGANSTSVSKGSMASTDTDERYLPFGHLPREYVQVPMTYIDRIERDADRKGAPRADRYFSTDVVATIHCKDARRIRVSFGGNDESERAMKMLHSLAFPGQKMKDLFAFSHNNVKPRAPDPGWHIYDAGKELDRMGVLKPRRNKGVSPWRETQLNANYELCGSYPSVLVVPASITDDEVKAVSYFRSEQRVPVLCWGRQADAASIWRSSQPKV 2070
MQHGRRDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQQERTVKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGMFKAEDVPSLFIKA+EDVSKKKPGAIMLGTGAILPQLVPAPGQFQQPPTNPTLGWGQAVQQPIQTQQHMALHRSKLGPVGG GSGAKSDGGVAVDLDPLSAFALMGPGTE STSGGT S SSVRSAGIS GATRG+SRRDKQQS S PASVQRPRESRGWLNA+PSLPGP RALGGGSQGNH +TDGVQKRGTP+YEDVVARPEAA EKVTQLEMM+NEGIECLENELLVVKLQNASCEALHGKMVPGMLIMTTYKLVIIPHSTQRGANSTSVSKGSMAST TDERYLPFGHLP+EYVQVPMTYIDRIERDADRKGAPRADRYFSTDVVATIHCKDARRIRVSFGGNDESERAMKMLHSLAFPGQKMKDLFAFS N VKPRAPDPGWHIYDAGKELDRMGVLKPRRNKGVSPWRETQLNANYELCGSYPSVLVVPASITDDE+KAVSYFRSEQRVPVLCWGRQADAASIWRSSQPK+
Sbjct: 1 MQHGRRDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQQERTVKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGMFKAEDVPSLFIKAKEDVSKKKPGAIMLGTGAILPQLVPAPGQFQQPPTNPTLGWGQAVQQPIQTQQHMALHRSKLGPVGGDGSGAKSDGGVAVDLDPLSAFALMGPGTEVASTSGGTGSASSVRSAGISSGATRGSSRRDKQQSTSPPASVQRPRESRGWLNAEPSLPGPPRALGGGSQGNHFKTDGVQKRGTPVYEDVVARPEAATEKVTQLEMMRNEGIECLENELLVVKLQNASCEALHGKMVPGMLIMTTYKLVIIPHSTQRGANSTSVSKGSMASTGTDERYLPFGHLPKEYVQVPMTYIDRIERDADRKGAPRADRYFSTDVVATIHCKDARRIRVSFGGNDESERAMKMLHSLAFPGQKMKDLFAFSRNTVKPRAPDPGWHIYDAGKELDRMGVLKPRRNKGVSPWRETQLNANYELCGSYPSVLVVPASITDDEIKAVSYFRSEQRVPVLCWGRQADAASIWRSSQPKI 637
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Match:
A0A6H5J9Z6_9PHAE (Phosphatidylinositol-3-phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z6_9PHAE)
HSP 1 Score: 716 bits (1849), Expect = 3.200e-247
Identity = 375/458 (81.88%), Postives = 382/458 (83.41%), Query Frame = 1
Query: 841 MALHRSKLGPVGGGGSGAKSDGGVAVDLDPLSAFALMGPGTEGTSTSGGTESGSSVRSAGISGGATRGASRRDKQQSASRPASVQRPRESRGWLNAQPSLPGPQR------------------------------------------------ALGGGSQGNHSRTDGVQKRGTPIYEDVVARPEAAAEKVTQLEMMKNEGIECLENELLVVKLQNASCEALHGKMVPGMLIMTTYKLVIIPHSTQRGANSTSVSKGSMASTDTDERYLPFGHLPREYVQVPMTYIDRIERDADRKGAPRADRYFSTDVVATIHCKDARRIRVSFGGNDESERAMKMLHSLAFPGQKMKDLFAFSHNNVKPRAPDPGWHIYDAGKELDRMGVLKPRRNKGVSPWRETQLNANYELCGSYPSVLVVPASITDDEVKAVSYFRSEQRVPVLCWGRQADAASIWRSSQPKV 2070
MALHRSKLGPVGGGGSGAKSDGGVAVDLDPLSAFALMGPGTEG STSGGTESG R +QQSAS PASVQRPRESRGWLNA+PSLPGP R ALGGGSQGNH +TDGVQKR TPIYEDVVARPEAAAEKVTQLEMMKNEGIECLENELLVVKLQNASCEALHGKMVPGMLIMTTYKLVIIPHSTQRGANSTSVSKGSMAST TDERYLPFGHLP+EY+QVPMTYIDRIERDADRKGAPRADRYFSTDV ATIHCKDARRIRVSFGGNDESERAMKMLHSLAFPGQKMKDLFAFS N VKPRAPDPGWHIYDAGKELDRMGVLKPRRNKGVSPWRETQLNANYELCGSYPSVLVVPASITDDE+KAVSYFRSEQRVPVLCWGRQADAASIWRSSQPK+
Sbjct: 1 MALHRSKLGPVGGGGSGAKSDGGVAVDLDPLSAFALMGPGTEGVSTSGGTESGXXXXXXXXXXXXXXXXXXRGRQQSASPPASVQRPRESRGWLNAEPSLPGPPRPVVETTGKAGFSIAGTAPGGLAPPITPSNRRPAQRMSSLMATPPRQLGALGGGSQGNHFKTDGVQKRDTPIYEDVVARPEAAAEKVTQLEMMKNEGIECLENELLVVKLQNASCEALHGKMVPGMLIMTTYKLVIIPHSTQRGANSTSVSKGSMASTGTDERYLPFGHLPKEYIQVPMTYIDRIERDADRKGAPRADRYFSTDVAATIHCKDARRIRVSFGGNDESERAMKMLHSLAFPGQKMKDLFAFSRNTVKPRAPDPGWHIYDAGKELDRMGVLKPRRNKGVSPWRETQLNANYELCGSYPSVLVVPASITDDEIKAVSYFRSEQRVPVLCWGRQADAASIWRSSQPKI 458
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Match:
A0A6H5J8E7_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8E7_9PHAE)
HSP 1 Score: 439 bits (1130), Expect = 1.390e-147
Identity = 221/230 (96.09%), Postives = 223/230 (96.96%), Query Frame = 1
Query: 160 MQHGRRDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQQERTVKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGMFKAEDVPSLFIKAEEDVSKKKPGAIMLGTGAILPQLVPAPGQFQQPPTNPTLGWGQAVQQPIQTQQHMAL 849
MQH RRDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLV DFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQQERTVKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGMFKAEDVPSLF+KAEEDV+KKKPGAIMLGTGAILPQLVP PGQFQQPPTNPTLGWGQA Q PIQTQQ M L
Sbjct: 1 MQHSRRDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVSDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQQERTVKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGMFKAEDVPSLFVKAEEDVTKKKPGAIMLGTGAILPQLVPPPGQFQQPPTNPTLGWGQAAQHPIQTQQVMTL 230
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Match:
A0A835YTP2_9STRA (RRM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP2_9STRA)
HSP 1 Score: 191 bits (485), Expect = 1.330e-53
Identity = 99/161 (61.49%), Postives = 125/161 (77.64%), Query Frame = 1
Query: 196 VGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNSSLGAEQ----QRGEKAPQQERTVKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGMFKAEDVPSL 666
VGNIP+GTTEEQLH IFSEAG +V+IR V+D ETGKPKG+AFVE+ED+ATALSAIRNLNGY+CNGR LRVN+S+NS+L E+ G+ ERTV+ V+ M + EV +++ +K+ EKEPD+AKQM S PQVAEALL MQ+RLGM K +P++
Sbjct: 1 VGNIPYGTTEEQLHAIFSEAGRVVNIRSVVDHETGKPKGYAFVEFEDSATALSAIRNLNGYECNGRQLRVNYSSNSALTGEKGGXXXXGKALEVGERTVRMVIAGMPLEEVRGLLTQLKEFAEKEPDQAKQMLTSQPQVAEALLQMQLRLGMVKPGQIPAV 161
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Match:
H6WBB6_VAULI (Phosphatidylinositol-3-phosphatase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB6_VAULI)
HSP 1 Score: 172 bits (436), Expect = 2.750e-41
Identity = 100/255 (39.22%), Postives = 138/255 (54.12%), Query Frame = 1
Query: 1309 LENELLVVKLQNASCEALHGKMVPGMLIMTTYKLVIIPHSTQRGANSTSVSKGSMASTDTDERYLPFGHLPREYVQVPMTYIDRIERDADRKGAPRADRYFSTDVVATIHCKDARRIRVSFGGNDESERAMKMLHSLAFPGQKMKDLFAFSHN-NVKPRAPDPGWHIYDAGKELDRMGVLKPRRNKGVSPWRETQLNANYELCGSYPSVLVVPASITDDEVKAVSYFRSEQRVPVLCWGRQADAASIWRSSQPKV 2070
L EL+V+ L N + + L ++ PG LIMTTY+++ IP + + FGHL Y +P+ +DRIERD K + V +I+ KD R +R+ +++R L S +FP Q + LF FSH N + A Y A +E +R GVL R + SPWR + LN YELCGSYP +LVVP S++D ++ ++ FRSE RVP L WGR +D+ASIWRSSQPKV
Sbjct: 170 LSGELVVMNLLNTALQTLDEEICPGELIMTTYRILFIPR------------------PEKISNLIGFGHLKSSYFSIPLGLVDRIERDRKIKNGVSS---MDLGVGISIYTKDLRFLRIVLQREIDTDRVFSALFSYSFPSQ-LDYLFTFSHRPNSEVYACS---FAYSALREFERQGVLLTRSDGSKSPWRLSALNRYYELCGSYPKLLVVPESVSDKDLAYIASFRSENRVPALSWGRASDSASIWRSSQPKV 399
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Match:
A0A7S4EPR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EPR9_9STRA)
HSP 1 Score: 149 bits (377), Expect = 3.930e-36
Identity = 83/200 (41.50%), Postives = 121/200 (60.50%), Query Frame = 1
Query: 157 KMQHGRRDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNSSLGA------------EQQRGEKAPQQERT----------VKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGMFKAEDVPSLFIKAEEDV 690
+ Q + K+D+FVGN+ F TTEEQLH+ FSE G ++ +RLV D ETGKP+GFAFVE+ED ALSAIRN+N Y+ NGR LRVNFSN+S L A + QR + T V + M E++DIV+ MK++ +++PD+A+++ HPQ+ EA+L + +L M + +L +K+ +V
Sbjct: 16 QQQQQSQLKHDIFVGNLAFNTTEEQLHQTFSEIGRVIKVRLVTDVETGKPRGFAFVEFEDPQAALSAIRNMNEYELNGRRLRVNFSNSSHLEALASKLGMDLSQHQTQRSSSSSSNNATQQTHGAGTNAVADSLKSMSKGEMYDIVAKMKEIADRDPDEARRLLAGHPQLPEAMLFIMSKLDMVQT----ALSVKSTPEV 211
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Match:
A0A1Z5KRC4_FISSO (Cleavage stimulation factor subunit 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRC4_FISSO)
HSP 1 Score: 146 bits (369), Expect = 2.880e-35
Identity = 88/222 (39.64%), Postives = 129/222 (58.11%), Query Frame = 1
Query: 181 KNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNS-------SLGAEQQRGEKAPQQERT------------VKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGMFKAEDVPSLFIKAEEDVSKKKPGAIMLGTGAILPQLVPAPGQFQQPPTNP 789
KND+FVGN+ F TTEEQLH+ FS+ G ++++RLV D +TGKP+GFAFVE++DA ALSAIRN+N Y+ NGR LRVNFSN+S LG + + ++ Q ++ V + M E++D+V+ +K+L + ++A+++ SHPQ+ EA+L +L M K V+ P +LGT P + PAP Q PP +P
Sbjct: 30 KNDIFVGNLAFNTTEEQLHQAFSDIGRVINVRLVTDVDTGKPRGFAFVEFQDAQAALSAIRNMNDYELNGRRLRVNFSNSSHLEDLAGKLGMDLSQAKRQQQNQQVGTNAAPTPGTSAVADALKAMSKAEMYDVVAKLKEL---DAEEARRLLASHPQLPEAILFCMSKLDMVKTP------------VTTVAP---ILGTAVPAPPIAPAP-TAQAPPRDP 232
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Match:
A0A8J2SWM9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWM9_9STRA)
HSP 1 Score: 142 bits (359), Expect = 6.430e-35
Identity = 89/209 (42.58%), Postives = 123/209 (58.85%), Query Frame = 1
Query: 160 MQHGRRD-KNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQQ---ERTVKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGMFKAEDVPSLFIKAEEDVS---KKKPGAIMLG----TGAILPQLVP 753
M H +R +NDVFVGNI FGTT+E + IFSE G + ++R+ ++ ETGKP+GF FVEY+DAATALSAIRNLNG D GR LRVNFSNNS+L RG ++ + + + ++ EVWD+VS K+L E + + ++ + + A + M LGM + PS ++ VS +P A+M T A L QL P
Sbjct: 1 MAHRQRGPRNDVFVGNIAFGTTDEDIRRIFSEVGRVKNVRMAVNSETGKPRGFCFVEYDDAATALSAIRNLNGRDVGGRDLRVNFSNNSALVDYASRGGSGREKTGAQLSATDITARLSDREVWDVVSEAKRLAEGDAETLGRLLNASGALTSAFVDMLGTLGMVPSAKGPSAAFAPQKPVSGFSAPQPDAMMQQVMQLTPAQLAQLPP 209
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Match:
A0A448ZLV1_9STRA (RRM domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLV1_9STRA)
HSP 1 Score: 145 bits (365), Expect = 1.640e-34
Identity = 79/184 (42.93%), Postives = 111/184 (60.33%), Query Frame = 1
Query: 160 MQHGRRDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNSSLGAEQQR-GEKAPQQE-----------------------RTVKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQVAEALLHMQVRLGM 639
Q + K+D+FVGN+ F TTEEQLH+ FSE G ++ +RLV D ETGKP+GFAFVE+ED ALSAIRN+N Y+ NGR LRVNFSN+S L A + G Q + V + M E++DIV+ MK++ +++PD+A+++ HPQ+ EA+L + +L M
Sbjct: 15 QQQQNQLKHDIFVGNLAFNTTEEQLHQTFSEIGRVIKVRLVTDVETGKPRGFAFVEFEDPQAALSAIRNMNDYELNGRRLRVNFSNSSHLEALASKLGMDLSQHQSRQSXXXXXXXXXXXXPHHSAGTNAVADSLKTMSKGEMYDIVAKMKEIADRDPDEARRLLAGHPQLPEAMLFIMSKLDM 198
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Match:
A0A7R9W4X6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4X6_9STRA)
HSP 1 Score: 138 bits (348), Expect = 2.180e-34
Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 1
Query: 172 RRDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNLNGYDCNGRLLRVNFSNNS-------SLGAE-----QQRGEKAPQQ------ERTVKGVVMQMGIYEVWDIVSNMKQLVEKEPDKAKQMFVSHPQV 600
++ K+D+FVGN+ F TTEEQLH+ FSE G I+ +R+V D ETGKP+GFAF+E+ED ALSAIRN+N Y+ NGR +RVNFSN+S LG + QQR A + + V + M E++D+V+ +K++ EK+PD+A+++ HPQ+
Sbjct: 3 QQQKHDIFVGNLAFSTTEEQLHQAFSEIGKIIKVRMVTDLETGKPRGFAFIEFEDPQAALSAIRNMNDYELNGRRIRVNFSNSSHLETLAGKLGMDMSQHTQQRSGGAGKSGDGGSGTQAVAESLKGMSKGEMYDVVAKLKEIAEKDPDEARRLLCGHPQL 163
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1030.307.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 0.00e+0 / Id = 96.39 Expect = 3.20e-247 / Id = 81.88 Expect = 1.39e-147 / Id = 96.09 Expect = 1.33e-53 / Id = 61.49 Expect = 2.75e-41 / Id = 39.22 Expect = 3.93e-36 / Id = 41.50 Expect = 2.88e-35 / Id = 39.64 Expect = 6.43e-35 / Id = 42.58 Expect = 1.64e-34 / Id = 42.93 Expect = 2.18e-34 / Id = 45.34 Sequence D8LMG1_ECTSI A0A6H5J9Z6_9PHAE A0A6H5J8E7_9PHAE A0A835YTP2_9STRA H6WBB6_VAULI A0A7S4EPR9_9STRA A0A1Z5KRC4_FISSO A0A8J2SWM9_9STRA A0A448ZLV1_9STRA A0A7R9W4X6_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 0 Start 1 Seed ortholog score 1220.3 Seed ortholog evalue 0.0 Seed eggNOG ortholog 2880.D8LMG1 Model size 2070 KEGG ko ko:K18081 KEGG Pathway ko00562,ko01100,ko04070,map00562,map01100,map04070 Hectar predicted targeting category other localisation GOs GO:0001101,GO:0003674,GO:0003824,GO:0004438,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009414,GO:0009415,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010035,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0023052,GO:0030258,GO:0031410,GO:0031668,GO:0031982,GO:0033554,GO:0034593,GO:0035556,GO:0042221,GO:0042578,GO:0042631,GO:0043226,GO:0043227,GO:0043229,GO:0044237,GO:0044238,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046486,GO:0046488,GO:0046839,GO:0046856,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052629,GO:0052744,GO:0052866,GO:0065007,GO:0070887,GO:0071214,GO:0071229,GO:0071462,GO:0071496,GO:0071704,GO:0080134,GO:0097708,GO:0104004,GO:0106018,GO:1901700,GO:1901701,GO:2000070 Exons 17 EggNOG free text desc. pre-mRNA cleavage required for polyadenylation EggNOG OGs COG0724@1,KOG0108@2759,KOG4471@1,KOG4471@2759 EC 3.1.3.64,3.1.3.95 Cds size 1911 COG Functional cat. H Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko01009
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462521.994095-CDS-Ecto-sp13_S_contig1030:491..681 1681462521.994095-CDS-Ecto-sp13_S_contig1030:491..681 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 492..681 - 1681462522.0043936-CDS-Ecto-sp13_S_contig1030:1503..1646 1681462522.0043936-CDS-Ecto-sp13_S_contig1030:1503..1646 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 1504..1646 - 1681462522.014788-CDS-Ecto-sp13_S_contig1030:1957..2050 1681462522.014788-CDS-Ecto-sp13_S_contig1030:1957..2050 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 1958..2050 - 1681462522.023936-CDS-Ecto-sp13_S_contig1030:2468..2576 1681462522.023936-CDS-Ecto-sp13_S_contig1030:2468..2576 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 2469..2576 - 1681462522.032584-CDS-Ecto-sp13_S_contig1030:2870..3035 1681462522.032584-CDS-Ecto-sp13_S_contig1030:2870..3035 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 2871..3035 - 1681462522.0459926-CDS-Ecto-sp13_S_contig1030:3414..3504 1681462522.0459926-CDS-Ecto-sp13_S_contig1030:3414..3504 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 3415..3504 - 1681462522.057231-CDS-Ecto-sp13_S_contig1030:4011..4137 1681462522.057231-CDS-Ecto-sp13_S_contig1030:4011..4137 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 4012..4137 - 1681462522.066749-CDS-Ecto-sp13_S_contig1030:5406..5724 1681462522.066749-CDS-Ecto-sp13_S_contig1030:5406..5724 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 5407..5724 - 1681462522.0765243-CDS-Ecto-sp13_S_contig1030:8005..8089 1681462522.0765243-CDS-Ecto-sp13_S_contig1030:8005..8089 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 8006..8089 - 1681462522.0869563-CDS-Ecto-sp13_S_contig1030:8383..8444 1681462522.0869563-CDS-Ecto-sp13_S_contig1030:8383..8444 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 8384..8444 - 1681462522.0967178-CDS-Ecto-sp13_S_contig1030:8682..8777 1681462522.0967178-CDS-Ecto-sp13_S_contig1030:8682..8777 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 8683..8777 - 1681462522.112008-CDS-Ecto-sp13_S_contig1030:9153..9282 1681462522.112008-CDS-Ecto-sp13_S_contig1030:9153..9282 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 9154..9282 - 1681462522.1244583-CDS-Ecto-sp13_S_contig1030:9480..9552 1681462522.1244583-CDS-Ecto-sp13_S_contig1030:9480..9552 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 9481..9552 - 1681462522.1405804-CDS-Ecto-sp13_S_contig1030:9803..9889 1681462522.1405804-CDS-Ecto-sp13_S_contig1030:9803..9889 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 9804..9889 - 1681462522.1519096-CDS-Ecto-sp13_S_contig1030:10367..10428 1681462522.1519096-CDS-Ecto-sp13_S_contig1030:10367..10428 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 10368..10428 - 1681462522.162465-CDS-Ecto-sp13_S_contig1030:11832..11885 1681462522.162465-CDS-Ecto-sp13_S_contig1030:11832..11885 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 11833..11885 - 1681462522.1811678-CDS-Ecto-sp13_S_contig1030:12060..12097 1681462522.1811678-CDS-Ecto-sp13_S_contig1030:12060..12097 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1030 12061..12097 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462522.1911404-UTR-Ecto-sp13_S_contig1030:12097..12256 1681462522.1911404-UTR-Ecto-sp13_S_contig1030:12097..12256 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig1030 12098..12256 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1030.307.1
>prot_Ecto-sp13_S_contig1030.307.1 ID=prot_Ecto-sp13_S_contig1030.307.1|Name=mRNA_Ecto-sp13_S_contig1030.307.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=637bp
MQHGRRDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPK back to top mRNA from alignment at Ecto-sp13_S_contig1030:492..12256-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1030.307.1 ID=mRNA_Ecto-sp13_S_contig1030.307.1|Name=mRNA_Ecto-sp13_S_contig1030.307.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=11765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1030:492..12256- (Ectocarpus species13 EcNAP12_S_4_19m)CCAGGCGGAGCCACCAACGGGCACGGGCGAGTATTCATGCCCACACACGC
CAGCGACAGTGAGTAGGCCGCCAGCAGACAGACAAACCAACAGACGGCTT
CTCTGTTCTGTTGAGGCTAGTAAGAAAACCAGGCGGAATTGCGAGAAGCA
GCATAGAAG ATGCAGCATGGTCGGCGCGACAAGAATGATGTATTCG GTAA
GATTTGTTTTACTGTTGTAGGACGGCAGCACTGCCCGACGACCTGAAGTA
TTTACGCATTTACGCCACTTTGTTGTGTGTGTAGCAGTAGGTCATGGATC
AGAATGCTTTGAGTCATCTGCTGATTCGACGAACTCCGCCTGGCCCGCTG
TCGTGTGCCTGTTCTCTCCAGTTGGTAACATTCCTTTCGGGACCACTGAA
GAGCAACTACATGAGATATTTTCG GTAAGCTGATTTTGATGGGCTTCAAG
TAGTCAATACTCTTGCCTGTTGAGCTCAGTTCTGCTTGTCGTGCGATTCT
TACCAGCAGCAGTTCCTCGATGTCCTGTATATTACGCATGGGTGGAGTCT
TATGAGATGTTGGATGCAGAGTGTTGCGCCCTAATCCTGCAATGATTTCA
AGGTCTGAGGTTAGTTGAGCACCTTGAGGGGTTGAGGACAGCCGATTTGA
TCTTGCTGTAAGTGTCAGCAACGAGTCAGCAACGAGCTCACGAGCTTTGT
AAGCCCAGTTGGAACGCGTTGTGGTTGGGACGGTCCTCAACCAGCATTTG
CATCACAGGAATACACCGTCGACCTCCCCGTCAAACCAAGATAGAAGGCA
CTAGTCTAGTATCATGGCACGAAAACAACACGATGGGGGCTCGAGTAGGG
ACTTTGTTTTTCATGAACCCCCAATCTCAAATTGCGTGGTACATATCCAA
GTCAGTAGAGATATCATGGTGACGTGCGTGCGGTCACTTGCCGCTGTCGG
ATTTGCTGTTGGAACTGCGATACAGAAGGATCGAAGGCTGCAGCAGCCTT
GCAAAAACTCTGCAATTCCGGATCCAAACGTCCCAACCGTTCATCTTGCA
CTCTTGTCAAAGACCCCTGTCCTGAACTAAATAAGGGCCTACCGCAGCAC
TGCTGTAGCTCATGCCACCAGAATCCTCGTGATACCCGCAGTTGGGTCTC
GTGGCAGCGAGTATGCACATAACAGTTGCCAATTTTTCGCTTGGGTCCAG
GTTTAAGGGGTTTTTGGACCCAGCTGCAACCTTCAGGATTGCATAGCCCC
TAAAGCAGATCTGACCCTTCCAGCGCTGCCAGCGTGCACGTCGCTGCTCC
GTGATGCCCTCCCTGTACTGATGATGTACTTATAGCATACCGTACGGGAA
GGACTCTCGTTTTCGAATCCAACATGTGTAGAGGTCGAAACATGAAAATC
GAAAAACGACGATTTGCTCAGGGAATCTCGACCTGACATATGCATACAGC
AATAGACTACCATACAAGTATGGGCATCATGAAGCACCATGCTCGTTGGA
ATGCAGAGTTATGTAGATCTGTTTCTGTTGCTGAGGCTGGGATATCGAAA
AGCCAAGGTACCAGCCGGGTTCAAACCTGCGTAAAGATGGATCCAAACCA
AGCTCAATACTACCACGTGCGGTTCTATATTCTTTGTCTACCGGGCGTCG
ACCTTGTATGCCTTGGACCCAGCATTGTTACGATATACCAGTATCTTGCA
TGAAGAGAGAGACCCGTTTCCCGTGAAGCAGAGCTTTGAGTTGAATGGAA
TGTGTTGGATGTCGTTCACCAAACAACTGCCCTTCTGGGCTTGCCCTCAC
GTGCACATGTTTCGAATGTCTGTTGCAGGAAGCTGGCGGCATTGTGAGCA
TCCGTCTGGTATTGGACTTCGAGACGGGCAAGCCGAAAG GTGACAATTTT
TGACGTGTAGGAGGGTGCGCGGGACCGCAATCGGAACAGGATACACACAC
ATCTTTGCTTGCAGCCTACAGCAGTGTTTGGCACTCGTGGCGGCTTCACC
CCATGTCGTAGCCGAAGAATATGCTCGCAGCCATTTTCGCATCGTTTCCC
GGGAATGCGTTTTCTGTGTAGGGTAGTGTTGTCACTGCTCCTTCTACGGC
ATGTTGGAGAGATTGAAAGACGCGTGTTGAAATTTCTGGTACTTTGTCGT
GCACGACTGCTGTGGACCCGCCCATCTTGCTAACCACCAAAGAAATAACC
AAGAAACAATGCTTGCTTTGTGACTTCAAGCTGCGCTGCTGCGGTTGTAA
CTCACTTGTCTCTCCTGCATTCGGTGCGTACGTGACAGTGGTATGTAGGA
GTCACGAGATTCACTTACTCGAGCCGTCACGGGTTTGTACCCCAAACTGC
CGGATGGCCTCTCTCAGGTTTTGCGTTCGTGGAGTACGAAGATGCCGCTA
CGGCCCTCAGCGCCATTAGGAACCTCAATGGCTACGATTGCAACGGCAGA
CTG GTGCGATGATCAAGTATTCGAGGTGGTATCATGACACCCCGGCAACA
ACCTTTGTCGGGAGTTGTCATCCGAATCCTTTGTCCCTTAAGCCACGATT
GCGATCGATGTAATTAGCTTGGAAGATACCGTAGCTGACCAGCTCTACAC
CAGACTTTCATTCGTGACTTTGCATACCCCCCCGTAAGGGCATTGCAACT
GAGCTCATCCGTCATCCGCCCCTGAATTGTACGTCCATTCGCAAACTCGG
CCAGCTTCGCGTGAACTTCTCGAACAACAGCTCGTTGGGTGCTGAGCAAC
AACGCGGAGAAAAGGCGCCTCAGCAG GTGATCGTACGCGAGCTGCTCGGT
TCACTGTGCGCAGACGACGATGGAGGTTGGCTGTTGCCATGAATGTTTTT
CGGTTACCTGCTGCATGTGTGGTTCGTGATTTTTATTTTGCCCCAATACG
TTGAGGGCTAGGTGGACGATCGAATCCCACATGCTTGTCATTTTGACGAC
ATTCGTTCTTTTCTTAACTTGCAGGAGAGGACGGTGAAAGGAGTGGTGAT
GCAGATGGGGATTTACGAGGTTTGGGACATTGTGTCCAACATGAAGCAAC
TTGTGGAGAAGGAGCCCGATAAAGCGAAACAGATGTTTGTCAGCCACCCT
CAG GTGAAGATACTCCCCGTCATGTAATTCTTCCCCCCACATGTGTATTC
CTCAAGTGTCCCTCGGCTCTGCGTCGATGTTGTCGGTGGCCTGCGCTCTC
AACGTTCATGTGATGAGCGCCATTACGATACCCCCAATGTATGTGTTTTC
TGCTTTGTGTTGCTTCAACGACGTCCAGCATGTACGTTCAAGATCTCTCG
AAAAGAGATGTCTGTCGAGGCAGGAGTCAACCTTGCGTATGGAGTACGCA
GGGAAGGGTGGAGTATTGAAAGCTGATGCAACGACGTATTCGACTGTCGC
ATATTTTTCTGCTCACCGCATCTCTTCCAACCCGTCCCTCAAACTACCTA
CCTCTGCCTTTCATCCTTCTTTATCGTAGGTCGCCGAAGCATTACTGCAC
ATGCAAGTGCGATTAGGAATGTTCAAGGCCGAGGATGTGCCGTCGTTGTT
TATTAAAGCCGAGGAAGATGTCAG GTAAGCTCAGTCACACTCAATCACAG
TGGCCACAGTATTTGGTCAACAGTTTCCCCCCTTTCGCTGCCCTCCTGTC
CGAACCCACACTTAGAAGCCGCTGCTCTTTGAACGCACTCATCCGGTTAT
GATTCTCCATATCACCCCCCCACACTGCCGCCATCCTTCGAAGCCACGTA
TGGTAGTGCTGTTTCTGTTCCTGACCACCTGCTTGATTTCTCCTCCCCCC
TTGGTTTACCAGCAAGAAAAAGCCGGGGGCTATCATGCTTGGGACCGGCG
CGATCCTGCCTCAACTCGTTCCT GTAAGTGAGGCGGAATTGCTGCTGTTG
ATGCAATGGTGCCCGTAGTTGGAGATGTTTCTTGCCTTGGAAGATGCTGT
ACGGTGTACGCATACATCGTGCTCATGTTCTTACCCTAGACCCCCTGGGA
TATTTCGTGGGAGAAGATTGAGATCCTCGAGACGTTTTTAGCCTTCGTTG
TAGGGTGTGGTGATTTGTTTTGATCTTGTCCTGCAGCCGTAACGCTTGAC
GGTCGTGGTTCGGACTGTTTCTCCATCTACTGTCCCTTCATGTGCCTGTC
CCATTTCCACTCGTCAGGCTCCTGGGCAGTTTCAGCAGCCACCAACTAAT
CCAACTTTGGGGTGGGGTCAGGCAGTACAACAGCCAATCCAAACGCAGCA
G GTACGGCATATGGATGGCTGCTTAATCGATGTCAAAAGCGCTGCGTCCA
CATGTGACGAAACGTACAGATTCCTGTGTTGATCTTGTTTTACGGTGCTT
GTGTGTTTTTCTCTACGCTGGCTTCTGTCCTTTTGTCTTGTCCCTTGGGA
TCGTGTCTCGAAGCACACTTAGTGCTGAGCAACAAGAGGCGAAACGGCGG
TATGGAAGTAACACTGCAGGTGCATCTGGTGGCCTTGCCGTTATCTCGTA
ACACGCTTGTCACGTCACTCTCCAAGATTCAAAATTTTCTCCTGCACCGC
TTCTTCAGGTCGTGGCCCTCCAGCCACCACCACCACCACCACCACCGCAG
CAACTACAGCAGCAGCCGCAGCAGCAGCAACAACAACAGATGCCAATTCT
ACAGCCGCCTCAATCACAGGGCGGCTGGGGCACGGCCGTCAACCCAACAG
CAGAGATCAAGCCGCGGGACCCGCGGGGCGGACGGTACAACAGATAACAA
CGTAGCTTGTTTCCGGTGTATCGCCAGCGGCACGTTCGTACGTTCATCGC
ATGTGGGGTGTTCGTGAAGGATTATCTCTGCTTCCCAGCGCTAGCGGCTT
CTGTCGTCCGTTCGTTATATCCAGAAGCTGCACAGAGTTGACGCCCGCAG
TGAAGAAAGGTTATGGAGAAACCTAAGGGCGAAAATATTGTAAGAAAAAG
AAGGCTGAGAGTTGTTGAGAAGTATCCGAGTCAGCTGTGGGTCCGGCAGT
GCGCTCTAAAATACTTGTAATCGTAGTCTATACTGGTAGCGACGAGAGAT
CAAACTGAACCATCAACGCGCTAGTAACGCCGTCACATGTTTCATCGTTG
ACGCGTCCAGTGCTTTGTTTGGCCGTTTTTTCGGGATGGGACACGTCATC
CATCTCTTCGGCACTATCTATTGCGTGGTGGGTACCGGATATCTAAAGAA
AGGTGCACTTAAATTTCCTTGCTTCAGGCCCTGGCGGTTTACTTTCCTCT
GCTGAAACCCACAGAGAACACAGCTTCAAGTTCAGTCAGTTGTGGGGTCC
AAATGCTCTTTCTAACTGCTGTCTGCTGTGTTGGTACAGATTGTGCCCCA
AGCACACCGTCAATTCTCCTAAACCTTTCTTTTGGTTGGTTCATTGAGGT
TCGCTAGGTGGGCTGTTCTAGAATGTAAAGAAAAACTGCTCTGTTGGTAC
AGATTGTGCCCAAACACGCGAGGCGTACCCCATGTTGTCAATTCTCCTAA
TAAACCTTTCTTTTGGTCGGTTCGTTGAGGCTCGCTAGGTGGGCTGTCCT
AGAATTTAAAGAAAACCTGCTGTGTTGGTACAGATTGTGCCCAAACACTC
GAGGTACACCCCATGTTGTCAATTCTCCTAAATATTTCTTTTGGTTGTTT
CACTGAGGTTCGCTGGGTCATGGTGCGGGCTGTTCTGGAAGAAAAAAAAA
AACACCAGCTGCTTGAGCTGTTAAGCCTTGGGAAACGTCATACCGTAACG
GGCCGTCAGCTGTAGATTGGCCCTGGCGGCTCCTATTTTTTTCGTCTTGC
ATTACACCTTGATGACGTGCCCTCATGAGCCCACTCCGACAAACAAGGGA
TCACTCACCTCTTTTTTGTTCTAATATTAATTTCTTAATATCACACAACA
AATCCATCTCTATCTAATGAAATGAGGCGAAGATAGATTAGCAATGAATC
CAAAGCGTGAGCGAAAGCTACCTGTATGTCTACGGTTTCCCAGACAGCAT
ACAGCTATATCTCCCCTGTGGATAACAGGCTCAACAAGGCCAGTTATTCA
AGTTGTTTGAACAACTCGAGTTCTCGGAAGATTTTTTTTGCCATTTTGGC
ACAAAGCGGATGGAACAGGTAACAAGCTGGGGCTGAGCTGAGAAAGCCAT
AGCACAGTGAATACTAACACCTTTAAACACCACCACGACCACTGTCAATT
CAACCGTGAGCATGGTGAGAGGTAAGTATTAAATGCACTTAAACTTGTCT
CCAAATGAACAAGTAAACACGTCATCGGGGGATCCACAATAGGTATTTTT
GTCCACAGATGGGGCTAGTCGATCTACCGACCCCCCTAGGGGCGATCGTG
TCATGTTCTACACCGAAGACCTACACCTTACCCCCTCGATGGTGAGGGAA
GGGAGAAAGAGCGAGGTGAAGGAAGTAGAGCGAGAGAACAGGAGAAAGTC
AAGCATTTGCTCGAAAAGTTTTATACAAGTTCTCAAAAGAGAGTTGGTGT
CGTAATTCTCATCTCTTATTCTCTCCGCCAAGCACATGGCGCTTCACCGA
AGCAAGCTTGGCCCTGTGGGCGGGGGTGGGAGTGGGGCAAAGAGCGATGG
GGGAGTGGCGGTAGATCTGGACCCTCTGTCGGCGTTTGCGCTCATGGGAC
CTGGCACCGAGGGCACTAGTACATCGGGAGGAACGGAGTCTGGCTCCAGC
GTAAGGTCTGCTGGAATCAGCGGCGGCGCAACACGAGGCGCCAGCAGGAG
AGACAAGCAGCAGAGTGCGTCGCGTCCTGCGTCGGTGCAGCGGCCGAGGG
AGAGCAGGGGCTGGCTTAACGCTCAACCGAGCCTTCCAGGGCCACAGAGG
GTACGTGCGTGTTTGCGTGCGTGTGTTTCCTAGTATCCCAGTATATCCTA
ATAGGACAAGTTCCTAGCAGCAGTAGACACGCGCCCATGGGTACGATCCA
GCTCTGCTGTTGTCAAAAGATTGGGAAACGATACACGATCTATTGTGGTC
AACCGTCGGGGTAGGCTGGGGAACCTGTGCGTCTTACGTACGTGGGAGTT
AGCAATTGCGCGATGGTCTGACAGGATATATCGTACTGTATCTTGAAAGA
AGTATTCACTCCGGCTCCTCACCCACCCGCGGCGATACGTTCGTAATTGC
AGTGCGGTAGCGGACTAATTTTTGTTGGGCGAAAGCCGCGCAACATGCGT
TTCGTTCATCCCTGATGGGCACGAAAAACGCGCCAAACCACCCCTTACAC
GATGCCAGCGCTGAGAGAATGATACACCTCTGGCGAGCGTGATGTGCAAG
TGAAACGTGAGGACTTGCGGATAGACTTTGACCTTCCAATTTGGAGAAGA
CGCATATACCAATTCATCTGTGTCACAATACCAATTCATCTGTGTCACAC
CGGCGTTTGCTATAATATTTCAGTCACGCAGATGAATGGTACAGTACCAC
GATTCAAGAGCATGCATTGCTGTACCGCAGCGGGGAGGAATATTTGTCGA
TCAACAACGGATAGTCCAACGACCGAGCGCTGTTAAGATTTGAGTGGTGT
GCTCGCAGAATAAAGTGTGAACGAACGTGGAGACTCGCATACTACACATA
CTGTTTGTTCGCCAACTTTTGCTTGTTTTTCGTGATTCCGTTCGTTGACT
GTTGTGTGTGTCTTCGCCCCATGTCCAACTCTCAGCCCGTGGTGGAAACA
TCGGGGAAAGCAGGCTTTAATATTGCAGGCACAGCGCCAGGGGGCCTTGC
GCCCCCCATCACACCATCAAATCGCAGACCGGTTCAACGCATGTCTTCGT
CAATGGCGACCCCACCGCGTCAGCTCGGAGTGAGTAACTCAAGGTGGTAT
GAAAAGCCCTGGTGCGACCTGGAGTAAGATACCATCTTTGTGAAAATATA
AGCTTGAGGACTTGATGCGTGGCCTCGGCACCTCTGCTCGCACGATGTGT
ACCGTCAAGGGTCTGTTGCCTCGTTTTGGTAGATCTAGACCGAGCGGTTG
CGGGAGTTAAGAGACGCGTATCATTTTTTTACGAATTGCGAGAGCGCGGT
GAGCTTTTGTCTGTTGCGAAACGCGAAGTGAGAACTAAAGCGTTCGATCT
TGTCGTCTGTTGTCGACAGGCGCTTGGTGGCGGCTCGCAGGGGAACCATT
CCAGGACAGACGGGGTTCAGAAGAGGGGCACACCCATTTACGAGGATGTG
GTAGCTCGTCCAGAAGCAGCGGCGGAGAAGGTCACCCAGTTGGAG GTGAG
ACATGACACATGACGTTTTGGGGGTCAATTCGATTGATCCCTCGTGATGA
GAACAGCAGTCATGCACACCGGGATGCCATGTTGTATATGTGAAACGATG
GCAGAATACCGCGCGCAAGTATTTTGTTCGAACTTCGTTGAAGTAAGATT
GCTTCGTACAGGGCCAAAAGTCCAGGGAAAGGGTGTCAATAGGTCGAAGC
CTTCTGTGTGAACGTTGTGTCGCCCGCCCACTCACGTAACAGGTATGGAG
CAGTAGTGGCGGCAAGCACCGTTGTCTTCTTCTTATTTTTCCAGCAGTTC
ATCTTTCGCATGCAAGAAAGGTGTAGAGAATGCGACACATGTTTCAGTGG
TTGTGGTACCATATATCCTATTGTTGTACCTGATATTGTAATTGTCGATA
GCGCGATGAAAAAGCGCATTGCTGTACATAACGCAGCTACGGTTCTGTGC
TGATTTGTTTTTTGCAACCTCCTTCTGAACCGTCCGCGTCGCACAACATC
AGATGATGAAGAACGAAGGGATCGAGTGCCTCGAGAACGAGTTACTCGTC
GTCAAGCTGCAGAACGCAAGCTGTGAGGCTCTTCACGGGAAG GTGTGTCG
GAGGCATGATTTGCCGCCTTTGCAGATGCGCTTGCTTTTCGACCGGGTGA
TTTTCGCGAACACGTCTCTCTCACTCTCCTGCATTCCCACAAAATATCGA
GAGCGTAACGCTTGCCAAACTCCTCTCGGCCAACTGGTTCTTCCGGTTAG
TGGTTGTAGTGCACGTGTGTGGAAAGTAGCATAATGAACGGCTTCCGTGT
TGGGCGTGTCGCGGCACCTTCACAGAGCACGTTGCAGCCTCTCATCTTCT
TCCTATTTCATGTTACTTTTACCTGGTGCTTATTCAAGCTGGCGATGTTT
TCGCACCCATGTTGCATATTGCGTATTCATGTCATTTTGCCGATACCGAC
TCCGTCGTTCGCCTTGCACAGATGGTGCCTGGAATGCTCATAATGACCAC
GTATAAGCTCGTGATCATTCCCCATAGCACGCAGAGGGGAGCGAACTCTA
CCAGCGTTAGCAAAGGGTCGATGGCGAGCACTGATACAGACGAGCGGTAT
CTTCCGTTTGGACACCTGCCGAGAGAGTACGTCCAG GTGCGAAAGGAAGG
ACTATCCGAGAGGGTTGCAAATTTTTGAGAGCAAGAAACGATGCTGCCAT
CATGGCCAGGGAGATGGGTTATTGTTCATGAGATCTGGTTACGTTCGTGG
TGGGGTGTCGTACGTGTTTCGGCATGATTTTCGTGTCAGTCGATGACACG
TCACCCGACGAGGGAGGTTGACGTCATTTATCGCAAGCCTCCTGTAGTTC
ACTTGTTTTCGTCAACAACTGATTGTTTCGCGTATGCTAATATGCTAGTT
TTCGTCTGTTAACTGTGGCGTCCAATCCAGGTCCCGATGACGTACATAGA
CAGGATCGAGCGTGATGCCGATCGGAAGGGAGCTCCCAGGGCGGATAGGT
ACTTCAGCACTGATGTGGTTGCCACCATACACTGCAAG GTCAGCTGCACG
ATTGGACGTACTTGTCTTGTTGGTTCCCGACCCGCATTAGTGTCGTCGCC
GCGGTTGACTGTAAGGGCGTGCATGTGGTATGTGGTGCAGCTGAGCTTTA
TTGCTTGGCTCGCGCGGAACTCTCGACTCAAAAGCCTGTTTGGACGATAT
AATGCGTCGCTTCAGCTGTGCCTCCAAGCCACGTGGCTGTGCCCCCAAAT
CACGAAGTCGTTGGTTTCCCAAAGAGGTGTGTGCGTGTCTCGTTAAGTCT
CCCATAAGGGTCTAGACATTGCCCCCACTAGGGGGTCTAGCTGGCAGACA
CTTGTAGATATCTGTTTCGTTGTAAGGACCGGAAAAGGTTCCCGGTGTTG
CGCACTGCATGACACGTGTACGTGACACATTGCACCGTGCCCTCGGTCAT
TTTTAGGATGCGAGAAGAATACGCGTGTCCTTCGGAGGAAATGACGAGTC
TGAACGAGCGATGAAAATGCTTCACAGCCTGGCCTTCCCAGGGCAAAAG G
TACATCAGGGTTGTCTTGTGTTGTTGGAGGTTGCTGCTGCCGCGCTATTT
TGCAGTCATGCGGTGTTCAGATCCTATGGTGCATTATTGTGGTGCCGTGA
AGCACATCAGACTAACTGCCCCGCATGCGTCTGGAATATTCGTCCGTCGT
GGGCGAGATTTTTTCTGGACGACCCGCTAACATGTTCCCGAAGACGCCGC
AAGACGCGTGCCACAAAGTCTCTTTTTTTTACCAATGAGATGAGCGGCCA
ATGTGCTTGCCTGCGTTTTTCCTTCCCTTCTGGTCCGTGGGTCTGTCTCC
CTGTCTCAAGATGAAAGATCTGTTTGCGTTCAGCCACAATAATGTGAAGC
CCAGGGCGCCAGACCCAGGGTGGCACATCTATGATGCTGGCAAGGAGTTG
GACAGGATGGGTGTGTTGAAGCCTCGGCGGAACAAGGGTGTTAGCCCTTG
GAG GTGAGCGAGCGGGGATAGATGGATAGCACTCTGTACTTGGTGGCGTT
TGGAGGATTATGCCGCTGCTAGGTATGCTACCGCTGTACTCACGGGCGTG
AAACCATCGCTTAAACTGATGAGTTCACCCAGGGATACGACCACTGCGTC
TCCAGTGAAAGACAAGGGCCAAGTTGCACTTCTGAGTGGTTGTTTGGCGT
AGCCAATTGGCACACTACACGAAGAAGAGATGGTATTATAGAGATTCGGG
TAGCTGGGCGACGGTAACGGCGCAGCGAAGCATAAAGCTCAAAGAGTAAC
AGTTGGTGAGGGCCCTGGTTGACCAGTCGAAAAAGGTGACATAAGAACCA
ACGCAGGGTGAGGACACAGGCCACAGCCAACACTTGCAGGTACAAAAACG
CACGAAAAAGCGCTCTGAGTAGGCAGAAACGTGTTGGAGGCATCTTTCCC
GGGACACACCCGGAGCTTCCCACAAGTTATTATGTGCGAGTTGCCGTGCG
GCTGGTATTTGGTACTTGGCGCCGGTGAATTAATTTTGCCGAAAGTGCCA
ACGTGGTGTCGTGTGTGTGCTCTGGCAAGGCATGGTTGTGAGCAGGCCGA
AGAAAGTCGGGCAGCACTCGGGAAGAGCGGGAGATTCGAAAAGTACAGGT
GTACTTGATTGCATGATCCTTGTTCAGGACTGACAATCGAAAGCATGGAA
TAATGTAGAGTGAAATGTTTTGCGATAGACGGAAGGCGGCTCCTTGGGGT
GGGTATGGTTGCTGATGGAAACTCCTCCTACCTCCCGCCTTTCCCTCTGC
ATGGATGGCGTGTGGATGTCACCAGGGAAACCCAGTTGAACGCCAACTAC
GAGTTGTGCGGATCGTACCCATCTGTTCTGGTCGTGCCGGCCTCCATTAC
GGACGACGAAGTTAAGGCCGTGTCCTACTTCCGATCAGAGCAGCGCGTGC
CTGTATTGTGCTGGGGGCGGCAAGCAGATGCTGCTTCGATATGGAGATCC
AGCCAACCTAAGGTA back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1030:492..12256-
>mRNA_Ecto-sp13_S_contig1030.307.1 ID=mRNA_Ecto-sp13_S_contig1030.307.1|Name=mRNA_Ecto-sp13_S_contig1030.307.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1911bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1030:492..12256- (Ectocarpus species13 EcNAP12_S_4_19m) back to top