prot_Ecto-sp13_S_contig13929.3067.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13929.3067.1
Unique Nameprot_Ecto-sp13_S_contig13929.3067.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length34
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13929.3067.1 vs. uniprot
Match: D7FN97_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN97_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 6.440e-6
Identity = 25/27 (92.59%), Postives = 25/27 (92.59%), Query Frame = 0 
Query:    1 MLMENLYHKFRETEQFKQIQEQLVSVE 27
            ML ENLYHKFRETEQFKQIQEQL SVE
Sbjct:  170 MLRENLYHKFRETEQFKQIQEQLFSVE 196
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13929.3067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FN97_ECTSI6.440e-692.59RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13929contigEcto-sp13_S_contig13929:88..189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13929.3067.1mRNA_Ecto-sp13_S_contig13929.3067.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13929 39..365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13929.3067.1 ID=prot_Ecto-sp13_S_contig13929.3067.1|Name=mRNA_Ecto-sp13_S_contig13929.3067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=34bp
MLMENLYHKFRETEQFKQIQEQLVSVEMQLEGA*
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