prot_Ecto-sp13_S_contig103.306.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig103.306.1
Unique Nameprot_Ecto-sp13_S_contig103.306.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length718
Homology
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A6H5JU39_9PHAE (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU39_9PHAE)

HSP 1 Score: 1175 bits (3040), Expect = 0.000e+0
Identity = 628/721 (87.10%), Postives = 644/721 (89.32%), Query Frame = 0
Query:    1 MHTVGARLRARAASLSGERSRVRRRCFSVFGDGDRGSHGSSEIAYGIGHTSSLCVGSHRQVTWPTAQSVPPRPRRXXXXXXXXXXXXXTVTAIRRSSNISQSREAASSLDHAEAEGGRRVLAMTDADFPRVLNGPAPGYAEDALRRLLLGNLPAVAARAGSRRGALETAPVGAKEEAGRSVDCRIGKESGRVGGAATSESTAPLARPAGWEGHVGAALSEGFSRESEEE---DQAPAFSATSNQDGHTNGNANDQTAVRRCRPQKAFSSTAASAADVVYEEQDDFVDPLMQIPQAVDRGDKGEDKDEVELPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGKPVQVSSLRHVREINKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLPPCPDGVTVDRFGRLRAPVQGEHEDEEAFRERRQKHYAYKRLLEK 718
            MHTVGARLRARAASLSGERSRVRRRCFSVFGDG                              PTAQSVPPRPRR             TVTAIRRSSNISQSREAASSLDHAEAEGGRRVLAMTDADFPRVLNGPAPGYAEDALRRLLLGNLPA AARAGS+RGALET P GAKEEAGRSVDCRI KESG VGGAA  ESTAPLARPAG EGHVGAALSEGFS ESEEE   DQAPAFSATSNQDGHTNG  N Q A+R+C PQ AFSSTA SAADVVYEEQDDFVDPLMQIPQAVDRGDKGEDKDEVELPYSTLYQMQL+REDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLT WYPALKESIEREQEAVWANLTDD+K TVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKG+PV+VSSLRHVR++NKQAQDAL MLEDTHWPIGAQVKLGAALIK+LIETACWTYDKESGVVTA DKGG ERGG ERDTEGFPMPKAAFVHDII GK+SR+G+LTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWV PNRGGFLRLRAQIMRTKGEAAQKHALRRADLR+VYKGLNCLGKVRWRINGHVLDTVMVCLRDKI VGDLPVI+DLPLPP PDGVTV R GRLRAPVQGE EDE  F+ERRQKHYAYKRLLEK
Sbjct:    1 MHTVGARLRARAASLSGERSRVRRRCFSVFGDG------------------------------PTAQSVPPRPRRREKPGSISTSTGTTVTAIRRSSNISQSREAASSLDHAEAEGGRRVLAMTDADFPRVLNGPAPGYAEDALRRLLLGNLPAGAARAGSKRGALETVPAGAKEEAGRSVDCRIRKESGGVGGAAKLESTAPLARPAGLEGHVGAALSEGFSWESEEEEEDDQAPAFSATSNQDGHTNGYTNYQAAIRQCGPQGAFSSTATSAADVVYEEQDDFVDPLMQIPQAVDRGDKGEDKDEVELPYSTLYQMQLEREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTTWYPALKESIEREQEAVWANLTDDNKGTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGQPVKVSSLRHVRKVNKQAQDALDMLEDTHWPIGAQVKLGAALIKLLIETACWTYDKESGVVTAWDKGGAERGGGERDTEGFPMPKAAFVHDIITGKSSRRGTLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVTPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRRVYKGLNCLGKVRWRINGHVLDTVMVCLRDKIAVGDLPVIEDLPLPPRPDGVTVGRLGRLRAPVQGEDEDEGVFKERRQKHYAYKRLLEK 691          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A836CEF2_9STRA (DNA-directed RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF2_9STRA)

HSP 1 Score: 239 bits (609), Expect = 2.370e-63
Identity = 147/368 (39.95%), Postives = 218/368 (59.24%), Query Frame = 0
Query:  312 LYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGK-PVQVSSLRHVREINKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRK-GSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLPPCP 677
            L QM+L  E+Q+  EA  +Y ++ + ++  G+   ++ ++R L  W+  L+ +IE EQ  VWAN                G G +GP LV+L+ +K AV+VMHE +NL L  GN GV     C R+AE  QAEVNL++M++K G K +  ++ S+ RHVRE+N +A+ AL MLE T WP   +V+LGA L+K+L +TA  T +               RG  E      P P+AAF H+I + + ++K G L + P  + ++ D +++ L  PR++PMLV P  W + +RGG++ L+A+IMRT+G  +Q  ALR A L +VY GLNCLG V WR+N  V          K+T+G+LP  +DLP+PP P
Sbjct:  168 LEQMRL--EEQTTAEAGARYRELAEGMVAGGRAGALRPLQRELLKWFIPLRAAIEEEQGRVWANERG------------AGMGAHGPLLVLLQPEKLAVMVMHETLNLTLQGGNAGVPAAGLCLRLAEAAQAEVNLLKMQRKLGSKAQVALRGSARRHVREVNIRAKRALDMLEVTDWPDALKVQLGAVLVKLLCDTAKVTPE-------------ATRGQPE------PTPEAAFRHEIRQLRANKKLGMLFLTPAAYKRVQDWNLAGLMQPRYLPMLVKPKPWQRHDRGGYIMLKARIMRTRGCRSQVDALRVAKLDKVYHGLNCLGSVPWRVNDEVYAIAKEAWDRKLTIGELPPQEDLPVPPMP 502          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: F0XZ85_AURAN (DNA-directed RNA polymerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ85_AURAN)

HSP 1 Score: 158 bits (399), Expect = 1.850e-36
Identity = 123/387 (31.78%), Postives = 178/387 (45.99%), Query Frame = 0
Query:  307 LPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKK-----------KDGKKGKPVQVSSLRHVRE-----INKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMAPEIFSKM-VDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQ--VYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLP 674
            L    LY+ QL+ E+++ + AC  Y  M+++L+++GKG ++K ++RL+  WY  L   I  E++A      D DK         G    YGP L++L  ++ AVL MH  + L L  G  G       T + E VQAE  +++++             +GK+  P      R +       +N +A+ AL   +DT WP   + KLG+AL+  L++ A                         +D  G P+      H I+     + G +    E+ S     E I R A PRF+PMLV P  W   + GGFLRLRA  MRT G A Q  A R A   +  V  GL+ +GKV W +NG V D V           DLP  +DL LP
Sbjct:   68 LERHALYERQLELEEETLEAACADYEAMIEDLLSLGKGAELKPVQRLMAQWYEPLVTRITAERKAT----LDGDKG--------GDLRIYGPLLLLLPPEQLAVLTMHTTIGLCLKHGPLGAKYSNLVTTLGETVQAEARVLKLRNLRRERLKAAEDAEGKRAVPKTFLDARALARLPTHVVNSRAKRALEEGDDTDWPTITRAKLGSALVMALLDVA-------------------------KDDAGSPL----LEHTIVYSNARKIGIIRAKDELLSHARCPETIRRAAMPRFLPMLVEPRRWRAYDEGGFLRLRAVAMRTHGCALQMEAFRNARGIEGGVLAGLDAMGKVPWAVNGPVFDLVKAAWASGGKWPDLPSQEDLALP 413          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A7S3JVN8_9STRA (DNA-directed RNA polymerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVN8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 4.640e-32
Identity = 96/358 (26.82%), Postives = 175/358 (48.88%), Query Frame = 0
Query:  303 DEVELPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKD--GKKGKPVQVS-----SLRHVREINKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMA-PEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTV 652
            D++ +    L + Q   E+Q  ++AC +Y KM+++L+ +GKG+++  +++ L +WY  L   I +E++     +  +D            R  YGP L++LK ++ AV+ +H V++  + +   GV      + + + +  E+ L R+K+K+   KK K    +     + R  + +N + +  L   +   WP     KLG+ LI  L++ A      E+                        + K    +    GK ++ G + ++ P +    ++E +   A PR++PM++PP  W   NRG +L+LR  +MRT G   Q  A+RRA + ++Y GLN L KV WRIN  +L+ +
Sbjct:   91 DDIYVSSYELLEKQKKNEEQVFEKACAEYKKMVQDLVRLGKGSELGPVQKALLSWYEPLTIRINQEKKDFINGIRSED------------RSIYGPLLLLLKPEEFAVITLHNVLSSTMQASVHGVKYSALISTIGQEIMTEIRLNRLKQKEKENKKNKKYSFNLKALINSRSSKLVNIRTRKILSESDGLEWPRSTLAKLGSFLINELMQVATCPNTNEA------------------------LFKHKIENTFKNGKVAKLGLVYISQPLLHESWIEEVMHHCAMPRYLPMVIPPRPWEDINRGCYLKLRPDLMRTNGNIDQIDAIRRAQMPKIYDGLNALAKVPWRINKEMLEII 412          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A7S2HVK7_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVK7_9STRA)

HSP 1 Score: 144 bits (363), Expect = 5.470e-32
Identity = 121/408 (29.66%), Postives = 188/408 (46.08%), Query Frame = 0
Query:  306 ELPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLK----------------ADKQAVLVMHEVVNLILA------SGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGKPVQVSSLRHVREINKQAQDAL------------------GMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRK-GSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLP 672
            E+    L ++Q +RE  +   AC +Y ++M ++  MGK T M+  E +++ W P   E I++E+EA        D            R  YGP    L                 A K AV+ +H +VN I +      + +KGV     C  +A  V++E NL  ++KK+ K+ K  Q    +   + +KQ   AL                   +LE+  W I  +VK+GA LIK+++E AC                        +D +G P    AF H+ I+ K + K GS+ M+   + ++   +   LA  R +PM+VPP  W++ ++GG+L +  +IMRT G  A   ALR ADL QV  GLN L K+ WR+N  VLD        ++ + +LP   D+P
Sbjct:   30 EMSLQKLMKIQEERERDTMHFACLRYEELMSDMKKMGKLTHMRQAESVISKWLPQAAEMIDQEKEAFERKEAAPD------------RKVYGPIFCGLDSVTHRNGKKNVITQSGAFKLAVITLHTMVNSISSGMGAHSAADKGVGFRFLCKSIANGVESEYNLSLLRKKE-KELKKNQSEESKAEHKDSKQLNKALMSPGLTSADARRLRIRVRDVLEENEWGIDMKVKVGAILIKIVLE-AC------------------------KDRDGNP----AFRHETIQAKYAHKVGSVIMSDCAYEELCGTEHKPLAQIRDLPMVVPPQPWLRWDKGGYLSVPTKIMRTHGYRAHSDALRVADLDQVLAGLNALNKLPWRVNHEVLDVAREAWDQRMAIAELPERTDIP 395          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A7S1VRP7_9EUKA (DNA-directed RNA polymerase n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VRP7_9EUKA)

HSP 1 Score: 135 bits (341), Expect = 2.530e-29
Identity = 110/375 (29.33%), Postives = 167/375 (44.53%), Query Frame = 0
Query:  335 MKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVT-VKTSGSFG------GRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRM----KKKDGKKGKPVQVSSLRHVRE-----INKQAQDALGMLEDT-----------------HWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMAPEIFSKMVD--EDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLP 674
            M  +  +G    +K  +++L  WY  L ++I+ EQ  V   L  + +    +TSGS         R  YGPFL+++ A K AV+ MHE + + L SG  GV+   A  ++ + V  E +L  +    K   G+  K V  S+LR +R      +   A    G +  T                  WP    VK+G+ALI  L++TA          +   D G       +  T G  +P  AFVH     +  R G L   P +  K+VD    +       ++PM+VPP  W   + GG+L    ++MRT+G   Q  AL +ADL  VY  L+ LG   W +N  V +  M   +    +G+LP   D+P+P
Sbjct:    1 MSTIRDLGLAATLKPAQKILVTWYQPLVKAIKDEQREVLRVLRKEAREEGSETSGSSSKYDSGIDRHVYGPFLLLMSAQKLAVITMHEALGMALRSGTVGVTFTSAAVQIGKAVHTEAHLQVLQGGGKGSGGRSLKSVTPSALRKLRRRKAAVLRNDADAPAGTIAGTAGDAKDVSYELPDPSVAEWPTAMLVKVGSALIARLLDTASIHE-----TIHVEDDG-------QFSTAGAQVP--AFVHAYRVERGKRSGILRTHPSVL-KLVDAGHKLRESMAAHYLPMVVPPRPWRDMDDGGYLATPTRVMRTRGSKLQARALAQADLTDVYAALDVLGGTPWTVNDRVFEVAMEAWKAGGGLGELPQRSDVPIP 360          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A0L0DM99_THETB (DNA-directed RNA polymerase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DM99_THETB)

HSP 1 Score: 132 bits (331), Expect = 8.180e-28
Identity = 105/342 (30.70%), Postives = 159/342 (46.49%), Query Frame = 0
Query:  312 LYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGKPVQVSSLRHVREINKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRK-GSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTV 652
            L++ QL RE  +   A  KY +   ++  +G+G ++   + LL  W+  L E+I  EQ  V            +T      R  YG  L +++ADK AV+ +HE+V L LAS  + V  V+AC  V E V+AEVNL R++++D  +   V++     V  +N  A+    +L D+ +    ++ +GAALIK  + T           V   D G                  AAF H I  G+  RK G + +   +   +    +     PR  PMLVPP  W  P+ GGFL L   ++R K    Q+ ALR   + +V  GLN L    W +N  VL+ +
Sbjct: 1240 LFEEQLTRETLALDAAVAKYKEQAAKVTELGRGAELGPGQSLLLKWFGPLAEAIGEEQRLV------------RTREGSSERAKYGHLLALVEADKLAVITLHELVGLSLASATQ-VKFVKACMAVGEAVEAEVNLARLRRED--RSALVRLKPKPSVSAVNASARS---LLPDSSFHKEGKLHVGAALIKTALATC---------TVAVPDGGHA----------------AAFEHRIDVGRGGRKTGWIALHSYVLDLVEAGHLEVQPAPRLSPMLVPPRPWTSPSSGGFLSLPTSVLRAKSYV-QQEALRGVGMSEVLDGLNALSATPWVVNARVLEVI 1537          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A0G4J6X7_PLABS (DNA-directed RNA polymerase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J6X7_PLABS)

HSP 1 Score: 121 bits (304), Expect = 8.020e-25
Identity = 114/366 (31.15%), Postives = 164/366 (44.81%), Query Frame = 0
Query:  316 QLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGKPVQVSSLRHVREINKQAQDAL----GMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHD-IIKGKNSRKGSLTMAPEIFSKMVDEDISRLATPR-FVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLPP 675
            Q+  E  S + +  KY ++ +EL   GK   MK  +RLL  WY  L  +I  EQ A+  N    D   V   G  G  G   P L+       AV+ +HE +   + S    V+ VR    + + V  EV L              Q   L  VR   K A+ A+     + +DT W     +KLG+ L+++L ETA    D+++               D +D       + AF+H  II   N R+G + + P     +    I R +    F+PM+VPP+ W  P  GG++  R+ +M+ +G  AQ+ AL  ADL  +YK L+ LG V WRIN  VLD V    R    V  LP   D  +PP
Sbjct:   33 QVRLETMSREISINKYRRLKEELAICGKLVNMKVTQRLLLNWYNPLVHAICEEQGAIERN----DSSLVDRRGYEGEIGILDPELL-------AVITLHETLKQTMTSE---VAVVRLALCIGKAVADEVRL--------------QQRLLNSVRRKPKTARLAIYQNEAIRKDT-WSKTTCLKLGSRLVQLLCETAMVPTDEDA---------------DAKD-------EPAFIHRMIITEVNKRRGVVNLHPRCMELINVGHIRRESIGTDFMPMVVPPIPWTMPEYGGYVSSRSNVMKMRGSRAQEEALELADLTTIYKALDVLGAVPWRINARVLDVVEELWRQGGGVASLPSRTDAIIPP 347          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A3P3Y5Z4_PLABS (DNA-directed RNA polymerase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y5Z4_PLABS)

HSP 1 Score: 121 bits (304), Expect = 1.060e-24
Identity = 114/366 (31.15%), Postives = 164/366 (44.81%), Query Frame = 0
Query:  316 QLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGKPVQVSSLRHVREINKQAQDAL----GMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHD-IIKGKNSRKGSLTMAPEIFSKMVDEDISRLATPR-FVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLPP 675
            Q+  E  S + +  KY ++ +EL   GK   MK  +RLL  WY  L  +I  EQ A+  N    D   V   G  G  G   P L+       AV+ +HE +   + S    V+ VR    + + V  EV L              Q   L  VR   K A+ A+     + +DT W     +KLG+ L+++L ETA    D+++               D +D       + AF+H  II   N R+G + + P     +    I R +    F+PM+VPP+ W  P  GG++  R+ +M+ +G  AQ+ AL  ADL  +YK L+ LG V WRIN  VLD V    R    V  LP   D  +PP
Sbjct:  230 QVRLETMSREISINKYRRLKEELAICGKLVNMKVTQRLLLNWYNPLVHAICEEQGAIERN----DSSLVDRRGYEGEIGILDPELL-------AVITLHETLKQTMTSE---VAVVRLALCIGKAVADEVRL--------------QQRLLNSVRRKPKTARLAIYQNEAIRKDT-WSKTTCLKLGSRLVQLLCETAMVPTDEDA---------------DAKD-------EPAFIHRMIITEVNKRRGVVNLHPRCMELINVGHIRRESIGTDFMPMVVPPIPWTMPEYGGYVSSRSNVMKMRGSRAQEEALELADLTTIYKALDVLGAVPWRINARVLDVVEELWRQGGGVASLPSRTDAIIPP 544          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A7S3HMT1_9STRA (DNA-directed RNA polymerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMT1_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.840e-24
Identity = 120/431 (27.84%), Postives = 204/431 (47.33%), Query Frame = 0
Query:  263 AFSSTAASAA--DVVYEEQDDFVDPLMQIPQAVDR-----GDKGEDKDEVELPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGK---KGKPVQVSS-LRHVREINKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVER--GGDERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMAPEIF---SKMVDEDISRLATPRFVPMLVPPLDWVKPNR---GGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLP 674
            AF+ + ++AA  D+ +++ +D    L     A+       G+  E+  E     + + + QL  E+    EA + Y +  K L  MG+GT MKS ++L+  WY  L  ++++E  A+ A         + TS  F     YGP+LV L  +K AV+ +  ++N  L +GN G   V     ++++V+AE ++  +K++      + K +  SS + +VR +N        + +   W   A+ K+G  LI VL++TA    DK       S+   V++     ++  +   + +  FVH              M P  F   SK+  +D S L  PR++PMLVPP  W   NR   G +  ++A +M+    A Q+ A+R  +L  V   L+ LG+  WRIN  V   +      K+++ +LP    LP+P
Sbjct:   73 AFNISTSNAANDDIFFQQSNDEFAFLRAKFDALPEFSGQLGESAEETAEKAAQAAAMIKRQLKIEEAQLLEASDLYQETFKNLAKMGRGTAMKSAQKLMLQWYEPLVVALKKEILAIRAG-------ELGTSSHFQH---YGPYLVQLPVEKLAVITLTTMLNCTLRNGNTGTKLVSIAMEISDMVEAESHVFYLKQEKEAPFWQKKLLDTSSRVANVRALNSFNNRLRKVAKGEMWTDAAKAKVGTKLIDVLLKTA--VDDKGVSAFVYSNNFYVQKLPYASKQTGQSMAVKRMGFVH--------------MEPAKFLEFSKLSLKD-STLLMPRYLPMLVPPKRW--DNREFSGAYFTMKAPMMKAIS-AQQRMAVRHGELNDVLDALDYLGQTGWRINPVVHTVIKDAWAAKLSIAELPGADPLPMP 473          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU39_9PHAE0.000e+087.10DNA-directed RNA polymerase n=2 Tax=Ectocarpus Tax... [more]
A0A836CEF2_9STRA2.370e-6339.95DNA-directed RNA polymerase n=1 Tax=Tribonema minu... [more]
F0XZ85_AURAN1.850e-3631.78DNA-directed RNA polymerase n=1 Tax=Aureococcus an... [more]
A0A7S3JVN8_9STRA4.640e-3226.82DNA-directed RNA polymerase n=1 Tax=Aureoumbra lag... [more]
A0A7S2HVK7_9STRA5.470e-3229.66DNA-directed RNA polymerase n=1 Tax=Dictyocha spec... [more]
A0A7S1VRP7_9EUKA2.530e-2929.33DNA-directed RNA polymerase n=1 Tax=Sexangularia s... [more]
A0A0L0DM99_THETB8.180e-2830.70DNA-directed RNA polymerase n=1 Tax=Thecamonas tra... [more]
A0A0G4J6X7_PLABS8.020e-2531.15DNA-directed RNA polymerase n=1 Tax=Plasmodiophora... [more]
A0A3P3Y5Z4_PLABS1.060e-2431.15DNA-directed RNA polymerase n=1 Tax=Plasmodiophora... [more]
A0A7S3HMT1_9STRA1.840e-2427.84DNA-directed RNA polymerase n=1 Tax=Spumella elong... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029262DNA-directed RNA polymerase, N-terminalSMARTSM01311RPOL_N_2coord: 314..639
e-value: 6.1E-45
score: 165.3
IPR029262DNA-directed RNA polymerase, N-terminalPFAMPF14700RPOL_Ncoord: 316..639
e-value: 2.8E-66
score: 224.2
IPR037159DNA-directed RNA polymerase, N-terminal domain superfamilyGENE3D1.10.1320.10coord: 544..637
e-value: 2.4E-9
score: 38.9
coord: 302..525
e-value: 2.5E-15
score: 58.6
IPR002092DNA-directed RNA polymerase, phage-typePANTHERPTHR10102DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 223..715
NoneNo IPR availablePANTHERPTHR10102:SF0DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 223..715
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 309..687

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig103contigEcto-sp13_S_contig103:32622..39293 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig103.306.1mRNA_Ecto-sp13_S_contig103.306.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig103 32622..39293 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig103.306.1 ID=prot_Ecto-sp13_S_contig103.306.1|Name=mRNA_Ecto-sp13_S_contig103.306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=718bp
MHTVGARLRARAASLSGERSRVRRRCFSVFGDGDRGSHGSSEIAYGIGHT
SSLCVGSHRQVTWPTAQSVPPRPRRREKPGSTSTSTGTTVTAIRRSSNIS
QSREAASSLDHAEAEGGRRVLAMTDADFPRVLNGPAPGYAEDALRRLLLG
NLPAVAARAGSRRGALETAPVGAKEEAGRSVDCRIGKESGRVGGAATSES
TAPLARPAGWEGHVGAALSEGFSRESEEEDQAPAFSATSNQDGHTNGNAN
DQTAVRRCRPQKAFSSTAASAADVVYEEQDDFVDPLMQIPQAVDRGDKGE
DKDEVELPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSI
ERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFL
VMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRM
KKKDGKKGKPVQVSSLRHVREINKQAQDALGMLEDTHWPIGAQVKLGAAL
IKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDI
IKGKNSRKGSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRG
GFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLD
TVMVCLRDKITVGDLPVIKDLPLPPCPDGVTVDRFGRLRAPVQGEHEDEE
AFRERRQKHYAYKRLLEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029262RPOL_N
IPR037159RNA_POL_N_sf
IPR002092DNA-dir_Rpol_phage-type