prot_Ecto-sp13_S_contig13918.3060.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13918.3060.1
Unique Nameprot_Ecto-sp13_S_contig13918.3060.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length154
Homology
BLAST of mRNA_Ecto-sp13_S_contig13918.3060.1 vs. uniprot
Match: A0A6H5J9K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K3_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.280e-29
Identity = 69/86 (80.23%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 SRRAIPAA-GGGGGMGSRRSASLPGRGIACVSLGALGIIRGSAAFLAGGGAAGLTSWGALQEGAPQARQGGPRAXXXXXXXXAGGR 85
            SRRAIPAA GGGGGMGSRRSA LPGR IACVSLGALG IR SAAF AGG AA LTSWGALQEGAPQARQG PRA        AGGR
Sbjct:    9 SRRAIPAACGGGGGMGSRRSACLPGRRIACVSLGALGFIRSSAAFFAGGRAAELTSWGALQEGAPQARQGRPRAGEGAAAALAGGR 94          
BLAST of mRNA_Ecto-sp13_S_contig13918.3060.1 vs. uniprot
Match: D7FHT1_ECTSI (Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHT1_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 1.250e-13
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   99 ARHRHVKAGITPPSEEDFIPYRSYGDPSKQPLVIVPGLDGATAFFSDVLPELTLN 153
            A+  H +AG   P +E FIP++ YGD +KQPLVIVPGLDG TAFFSD++PEL LN
Sbjct:   21 AKRNHERAGA--PRQEQFIPFKKYGDDTKQPLVIVPGLDGVTAFFSDIVPELALN 73          
BLAST of mRNA_Ecto-sp13_S_contig13918.3060.1 vs. uniprot
Match: A0A7S3UUZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUZ2_HETAK)

HSP 1 Score: 55.8 bits (133), Expect = 2.790e-6
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
Query:  113 EEDFIPYRSYGDPSKQPLVIVPGLDGATAFFSDVLPELT 151
            E  F  Y+ YG+P   PL+I+PGLDG T+FFSDV+PE T
Sbjct:   25 EPHFEAYKQYGNPENPPLIIIPGLDGCTSFFSDVIPEFT 63          
BLAST of mRNA_Ecto-sp13_S_contig13918.3060.1 vs. uniprot
Match: A0A7S2XZC0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZC0_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.710e-5
Identity = 21/36 (58.33%), Postives = 30/36 (83.33%), Query Frame = 0
Query:  116 FIPYRSYGDPSKQPLVIVPGLDGATAFFSDVLPELT 151
            F  ++ +GDPS  P+V++PGLDG T+FF+DV+PELT
Sbjct:   28 FERFKQFGDPSNPPVVLIPGLDGCTSFFADVIPELT 63          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13918.3060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J9K3_9PHAE1.280e-2980.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHT1_ECTSI1.250e-1363.64Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID... [more]
A0A7S3UUZ2_HETAK2.790e-658.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZC0_9STRA1.710e-558.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13918contigEcto-sp13_S_contig13918:3135..4078 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13918.3060.1mRNA_Ecto-sp13_S_contig13918.3060.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13918 3135..4078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13918.3060.1 ID=prot_Ecto-sp13_S_contig13918.3060.1|Name=mRNA_Ecto-sp13_S_contig13918.3060.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp
SRRAIPAAGGGGGMGSRRSASLPGRGIACVSLGALGIIRGSAAFLAGGGA
AGLTSWGALQEGAPQARQGGPRAGGGAAAAGAGGRFLLPRTSVVTSVKAR
HRHVKAGITPPSEEDFIPYRSYGDPSKQPLVIVPGLDGATAFFSDVLPEL
TLNV
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