mRNA_Ecto-sp13_S_contig103.306.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig103.306.1
Unique NamemRNA_Ecto-sp13_S_contig103.306.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A6H5JU39_9PHAE (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU39_9PHAE)

HSP 1 Score: 1175 bits (3040), Expect = 0.000e+0
Identity = 628/721 (87.10%), Postives = 644/721 (89.32%), Query Frame = 1
Query:    1 MHTVGARLRARAASLSGERSRVRRRCFSVFGDGDRGSHGSSEIAYGIGHTSSLCVGSHRQVTWPTAQSVPPRPRRXXXXXXXXXXXXXTVTAIRRSSNISQSREAASSLDHAEAEGGRRVLAMTDADFPRVLNGPAPGYAEDALRRLLLGNLPAVAARAGSRRGALETAPVGAKEEAGRSVDCRIGKESGRVGGAATSESTAPLARPAGWEGHVGAALSEGFSRESEEE---DQAPAFSATSNQDGHTNGNANDQTAVRRCRPQKAFSSTAASAADVVYEEQDDFVDPLMQIPQAVDRGDKGEDKDEVELPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGKPVQVSSLRHVREINKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLPPCPDGVTVDRFGRLRAPVQGEHEDEEAFRERRQKHYAYKRLLEK 2154
            MHTVGARLRARAASLSGERSRVRRRCFSVFGDG                              PTAQSVPPRPRR             TVTAIRRSSNISQSREAASSLDHAEAEGGRRVLAMTDADFPRVLNGPAPGYAEDALRRLLLGNLPA AARAGS+RGALET P GAKEEAGRSVDCRI KESG VGGAA  ESTAPLARPAG EGHVGAALSEGFS ESEEE   DQAPAFSATSNQDGHTNG  N Q A+R+C PQ AFSSTA SAADVVYEEQDDFVDPLMQIPQAVDRGDKGEDKDEVELPYSTLYQMQL+REDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLT WYPALKESIEREQEAVWANLTDD+K TVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKG+PV+VSSLRHVR++NKQAQDAL MLEDTHWPIGAQVKLGAALIK+LIETACWTYDKESGVVTA DKGG ERGG ERDTEGFPMPKAAFVHDII GK+SR+G+LTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWV PNRGGFLRLRAQIMRTKGEAAQKHALRRADLR+VYKGLNCLGKVRWRINGHVLDTVMVCLRDKI VGDLPVI+DLPLPP PDGVTV R GRLRAPVQGE EDE  F+ERRQKHYAYKRLLEK
Sbjct:    1 MHTVGARLRARAASLSGERSRVRRRCFSVFGDG------------------------------PTAQSVPPRPRRREKPGSISTSTGTTVTAIRRSSNISQSREAASSLDHAEAEGGRRVLAMTDADFPRVLNGPAPGYAEDALRRLLLGNLPAGAARAGSKRGALETVPAGAKEEAGRSVDCRIRKESGGVGGAAKLESTAPLARPAGLEGHVGAALSEGFSWESEEEEEDDQAPAFSATSNQDGHTNGYTNYQAAIRQCGPQGAFSSTATSAADVVYEEQDDFVDPLMQIPQAVDRGDKGEDKDEVELPYSTLYQMQLEREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTTWYPALKESIEREQEAVWANLTDDNKGTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGQPVKVSSLRHVRKVNKQAQDALDMLEDTHWPIGAQVKLGAALIKLLIETACWTYDKESGVVTAWDKGGAERGGGERDTEGFPMPKAAFVHDIITGKSSRRGTLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVTPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRRVYKGLNCLGKVRWRINGHVLDTVMVCLRDKIAVGDLPVIEDLPLPPRPDGVTVGRLGRLRAPVQGEDEDEGVFKERRQKHYAYKRLLEK 691          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A836CEF2_9STRA (DNA-directed RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF2_9STRA)

HSP 1 Score: 239 bits (609), Expect = 2.370e-63
Identity = 147/368 (39.95%), Postives = 218/368 (59.24%), Query Frame = 1
Query:  934 LYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGK-PVQVSSLRHVREINKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRK-GSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLPPCP 2031
            L QM+L  E+Q+  EA  +Y ++ + ++  G+   ++ ++R L  W+  L+ +IE EQ  VWAN                G G +GP LV+L+ +K AV+VMHE +NL L  GN GV     C R+AE  QAEVNL++M++K G K +  ++ S+ RHVRE+N +A+ AL MLE T WP   +V+LGA L+K+L +TA  T +               RG  E      P P+AAF H+I + + ++K G L + P  + ++ D +++ L  PR++PMLV P  W + +RGG++ L+A+IMRT+G  +Q  ALR A L +VY GLNCLG V WR+N  V          K+T+G+LP  +DLP+PP P
Sbjct:  168 LEQMRL--EEQTTAEAGARYRELAEGMVAGGRAGALRPLQRELLKWFIPLRAAIEEEQGRVWANERG------------AGMGAHGPLLVLLQPEKLAVMVMHETLNLTLQGGNAGVPAAGLCLRLAEAAQAEVNLLKMQRKLGSKAQVALRGSARRHVREVNIRAKRALDMLEVTDWPDALKVQLGAVLVKLLCDTAKVTPE-------------ATRGQPE------PTPEAAFRHEIRQLRANKKLGMLFLTPAAYKRVQDWNLAGLMQPRYLPMLVKPKPWQRHDRGGYIMLKARIMRTRGCRSQVDALRVAKLDKVYHGLNCLGSVPWRVNDEVYAIAKEAWDRKLTIGELPPQEDLPVPPMP 502          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: F0XZ85_AURAN (DNA-directed RNA polymerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ85_AURAN)

HSP 1 Score: 158 bits (399), Expect = 1.850e-36
Identity = 123/387 (31.78%), Postives = 178/387 (45.99%), Query Frame = 1
Query:  919 LPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKK-----------KDGKKGKPVQVSSLRHVRE-----INKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMAPEIFSKM-VDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQ--VYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLP 2022
            L    LY+ QL+ E+++ + AC  Y  M+++L+++GKG ++K ++RL+  WY  L   I  E++A      D DK         G    YGP L++L  ++ AVL MH  + L L  G  G       T + E VQAE  +++++             +GK+  P      R +       +N +A+ AL   +DT WP   + KLG+AL+  L++ A                         +D  G P+      H I+     + G +    E+ S     E I R A PRF+PMLV P  W   + GGFLRLRA  MRT G A Q  A R A   +  V  GL+ +GKV W +NG V D V           DLP  +DL LP
Sbjct:   68 LERHALYERQLELEEETLEAACADYEAMIEDLLSLGKGAELKPVQRLMAQWYEPLVTRITAERKAT----LDGDKG--------GDLRIYGPLLLLLPPEQLAVLTMHTTIGLCLKHGPLGAKYSNLVTTLGETVQAEARVLKLRNLRRERLKAAEDAEGKRAVPKTFLDARALARLPTHVVNSRAKRALEEGDDTDWPTITRAKLGSALVMALLDVA-------------------------KDDAGSPL----LEHTIVYSNARKIGIIRAKDELLSHARCPETIRRAAMPRFLPMLVEPRRWRAYDEGGFLRLRAVAMRTHGCALQMEAFRNARGIEGGVLAGLDAMGKVPWAVNGPVFDLVKAAWASGGKWPDLPSQEDLALP 413          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A7S3JVN8_9STRA (DNA-directed RNA polymerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVN8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 4.640e-32
Identity = 96/358 (26.82%), Postives = 175/358 (48.88%), Query Frame = 1
Query:  907 DEVELPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKD--GKKGKPVQVS-----SLRHVREINKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMA-PEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTV 1956
            D++ +    L + Q   E+Q  ++AC +Y KM+++L+ +GKG+++  +++ L +WY  L   I +E++     +  +D            R  YGP L++LK ++ AV+ +H V++  + +   GV      + + + +  E+ L R+K+K+   KK K    +     + R  + +N + +  L   +   WP     KLG+ LI  L++ A      E+                        + K    +    GK ++ G + ++ P +    ++E +   A PR++PM++PP  W   NRG +L+LR  +MRT G   Q  A+RRA + ++Y GLN L KV WRIN  +L+ +
Sbjct:   91 DDIYVSSYELLEKQKKNEEQVFEKACAEYKKMVQDLVRLGKGSELGPVQKALLSWYEPLTIRINQEKKDFINGIRSED------------RSIYGPLLLLLKPEEFAVITLHNVLSSTMQASVHGVKYSALISTIGQEIMTEIRLNRLKQKEKENKKNKKYSFNLKALINSRSSKLVNIRTRKILSESDGLEWPRSTLAKLGSFLINELMQVATCPNTNEA------------------------LFKHKIENTFKNGKVAKLGLVYISQPLLHESWIEEVMHHCAMPRYLPMVIPPRPWEDINRGCYLKLRPDLMRTNGNIDQIDAIRRAQMPKIYDGLNALAKVPWRINKEMLEII 412          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A7S2HVK7_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVK7_9STRA)

HSP 1 Score: 144 bits (363), Expect = 5.470e-32
Identity = 121/408 (29.66%), Postives = 188/408 (46.08%), Query Frame = 1
Query:  916 ELPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLK----------------ADKQAVLVMHEVVNLILA------SGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGKPVQVSSLRHVREINKQAQDAL------------------GMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRK-GSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLP 2016
            E+    L ++Q +RE  +   AC +Y ++M ++  MGK T M+  E +++ W P   E I++E+EA        D            R  YGP    L                 A K AV+ +H +VN I +      + +KGV     C  +A  V++E NL  ++KK+ K+ K  Q    +   + +KQ   AL                   +LE+  W I  +VK+GA LIK+++E AC                        +D +G P    AF H+ I+ K + K GS+ M+   + ++   +   LA  R +PM+VPP  W++ ++GG+L +  +IMRT G  A   ALR ADL QV  GLN L K+ WR+N  VLD        ++ + +LP   D+P
Sbjct:   30 EMSLQKLMKIQEERERDTMHFACLRYEELMSDMKKMGKLTHMRQAESVISKWLPQAAEMIDQEKEAFERKEAAPD------------RKVYGPIFCGLDSVTHRNGKKNVITQSGAFKLAVITLHTMVNSISSGMGAHSAADKGVGFRFLCKSIANGVESEYNLSLLRKKE-KELKKNQSEESKAEHKDSKQLNKALMSPGLTSADARRLRIRVRDVLEENEWGIDMKVKVGAILIKIVLE-AC------------------------KDRDGNP----AFRHETIQAKYAHKVGSVIMSDCAYEELCGTEHKPLAQIRDLPMVVPPQPWLRWDKGGYLSVPTKIMRTHGYRAHSDALRVADLDQVLAGLNALNKLPWRVNHEVLDVAREAWDQRMAIAELPERTDIP 395          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A7S1VRP7_9EUKA (DNA-directed RNA polymerase n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VRP7_9EUKA)

HSP 1 Score: 135 bits (341), Expect = 2.530e-29
Identity = 110/375 (29.33%), Postives = 167/375 (44.53%), Query Frame = 1
Query: 1003 MKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVT-VKTSGSFG------GRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRM----KKKDGKKGKPVQVSSLRHVRE-----INKQAQDALGMLEDT-----------------HWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMAPEIFSKMVD--EDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLP 2022
            M  +  +G    +K  +++L  WY  L ++I+ EQ  V   L  + +    +TSGS         R  YGPFL+++ A K AV+ MHE + + L SG  GV+   A  ++ + V  E +L  +    K   G+  K V  S+LR +R      +   A    G +  T                  WP    VK+G+ALI  L++TA          +   D G       +  T G  +P  AFVH     +  R G L   P +  K+VD    +       ++PM+VPP  W   + GG+L    ++MRT+G   Q  AL +ADL  VY  L+ LG   W +N  V +  M   +    +G+LP   D+P+P
Sbjct:    1 MSTIRDLGLAATLKPAQKILVTWYQPLVKAIKDEQREVLRVLRKEAREEGSETSGSSSKYDSGIDRHVYGPFLLLMSAQKLAVITMHEALGMALRSGTVGVTFTSAAVQIGKAVHTEAHLQVLQGGGKGSGGRSLKSVTPSALRKLRRRKAAVLRNDADAPAGTIAGTAGDAKDVSYELPDPSVAEWPTAMLVKVGSALIARLLDTASIHE-----TIHVEDDG-------QFSTAGAQVP--AFVHAYRVERGKRSGILRTHPSVL-KLVDAGHKLRESMAAHYLPMVVPPRPWRDMDDGGYLATPTRVMRTRGSKLQARALAQADLTDVYAALDVLGGTPWTVNDRVFEVAMEAWKAGGGLGELPQRSDVPIP 360          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A0L0DM99_THETB (DNA-directed RNA polymerase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DM99_THETB)

HSP 1 Score: 132 bits (331), Expect = 8.180e-28
Identity = 105/342 (30.70%), Postives = 159/342 (46.49%), Query Frame = 1
Query:  934 LYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGKPVQVSSLRHVREINKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDIIKGKNSRK-GSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTV 1956
            L++ QL RE  +   A  KY +   ++  +G+G ++   + LL  W+  L E+I  EQ  V            +T      R  YG  L +++ADK AV+ +HE+V L LAS  + V  V+AC  V E V+AEVNL R++++D  +   V++     V  +N  A+    +L D+ +    ++ +GAALIK  + T           V   D G                  AAF H I  G+  RK G + +   +   +    +     PR  PMLVPP  W  P+ GGFL L   ++R K    Q+ ALR   + +V  GLN L    W +N  VL+ +
Sbjct: 1240 LFEEQLTRETLALDAAVAKYKEQAAKVTELGRGAELGPGQSLLLKWFGPLAEAIGEEQRLV------------RTREGSSERAKYGHLLALVEADKLAVITLHELVGLSLASATQ-VKFVKACMAVGEAVEAEVNLARLRRED--RSALVRLKPKPSVSAVNASARS---LLPDSSFHKEGKLHVGAALIKTALATC---------TVAVPDGGHA----------------AAFEHRIDVGRGGRKTGWIALHSYVLDLVEAGHLEVQPAPRLSPMLVPPRPWTSPSSGGFLSLPTSVLRAKSYV-QQEALRGVGMSEVLDGLNALSATPWVVNARVLEVI 1537          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A0G4J6X7_PLABS (DNA-directed RNA polymerase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J6X7_PLABS)

HSP 1 Score: 121 bits (304), Expect = 8.020e-25
Identity = 114/366 (31.15%), Postives = 164/366 (44.81%), Query Frame = 1
Query:  946 QLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGKPVQVSSLRHVREINKQAQDAL----GMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHD-IIKGKNSRKGSLTMAPEIFSKMVDEDISRLATPR-FVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLPP 2025
            Q+  E  S + +  KY ++ +EL   GK   MK  +RLL  WY  L  +I  EQ A+  N    D   V   G  G  G   P L+       AV+ +HE +   + S    V+ VR    + + V  EV L              Q   L  VR   K A+ A+     + +DT W     +KLG+ L+++L ETA    D+++               D +D       + AF+H  II   N R+G + + P     +    I R +    F+PM+VPP+ W  P  GG++  R+ +M+ +G  AQ+ AL  ADL  +YK L+ LG V WRIN  VLD V    R    V  LP   D  +PP
Sbjct:   33 QVRLETMSREISINKYRRLKEELAICGKLVNMKVTQRLLLNWYNPLVHAICEEQGAIERN----DSSLVDRRGYEGEIGILDPELL-------AVITLHETLKQTMTSE---VAVVRLALCIGKAVADEVRL--------------QQRLLNSVRRKPKTARLAIYQNEAIRKDT-WSKTTCLKLGSRLVQLLCETAMVPTDEDA---------------DAKD-------EPAFIHRMIITEVNKRRGVVNLHPRCMELINVGHIRRESIGTDFMPMVVPPIPWTMPEYGGYVSSRSNVMKMRGSRAQEEALELADLTTIYKALDVLGAVPWRINARVLDVVEELWRQGGGVASLPSRTDAIIPP 347          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A3P3Y5Z4_PLABS (DNA-directed RNA polymerase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y5Z4_PLABS)

HSP 1 Score: 121 bits (304), Expect = 1.060e-24
Identity = 114/366 (31.15%), Postives = 164/366 (44.81%), Query Frame = 1
Query:  946 QLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGKKGKPVQVSSLRHVREINKQAQDAL----GMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHD-IIKGKNSRKGSLTMAPEIFSKMVDEDISRLATPR-FVPMLVPPLDWVKPNRGGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLPP 2025
            Q+  E  S + +  KY ++ +EL   GK   MK  +RLL  WY  L  +I  EQ A+  N    D   V   G  G  G   P L+       AV+ +HE +   + S    V+ VR    + + V  EV L              Q   L  VR   K A+ A+     + +DT W     +KLG+ L+++L ETA    D+++               D +D       + AF+H  II   N R+G + + P     +    I R +    F+PM+VPP+ W  P  GG++  R+ +M+ +G  AQ+ AL  ADL  +YK L+ LG V WRIN  VLD V    R    V  LP   D  +PP
Sbjct:  230 QVRLETMSREISINKYRRLKEELAICGKLVNMKVTQRLLLNWYNPLVHAICEEQGAIERN----DSSLVDRRGYEGEIGILDPELL-------AVITLHETLKQTMTSE---VAVVRLALCIGKAVADEVRL--------------QQRLLNSVRRKPKTARLAIYQNEAIRKDT-WSKTTCLKLGSRLVQLLCETAMVPTDEDA---------------DAKD-------EPAFIHRMIITEVNKRRGVVNLHPRCMELINVGHIRRESIGTDFMPMVVPPIPWTMPEYGGYVSSRSNVMKMRGSRAQEEALELADLTTIYKALDVLGAVPWRINARVLDVVEELWRQGGGVASLPSRTDAIIPP 544          
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Match: A0A7S3HMT1_9STRA (DNA-directed RNA polymerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMT1_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.840e-24
Identity = 120/431 (27.84%), Postives = 204/431 (47.33%), Query Frame = 1
Query:  787 AFSSTAASAA--DVVYEEQDDFVDPLMQIPQAVDR-----GDKGEDKDEVELPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSIERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFLVMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRMKKKDGK---KGKPVQVSS-LRHVREINKQAQDALGMLEDTHWPIGAQVKLGAALIKVLIETACWTYDKESGVVTASDKGGVER--GGDERDTEGFPMPKAAFVHDIIKGKNSRKGSLTMAPEIF---SKMVDEDISRLATPRFVPMLVPPLDWVKPNR---GGFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLDTVMVCLRDKITVGDLPVIKDLPLP 2022
            AF+ + ++AA  D+ +++ +D    L     A+       G+  E+  E     + + + QL  E+    EA + Y +  K L  MG+GT MKS ++L+  WY  L  ++++E  A+ A         + TS  F     YGP+LV L  +K AV+ +  ++N  L +GN G   V     ++++V+AE ++  +K++      + K +  SS + +VR +N        + +   W   A+ K+G  LI VL++TA    DK       S+   V++     ++  +   + +  FVH              M P  F   SK+  +D S L  PR++PMLVPP  W   NR   G +  ++A +M+    A Q+ A+R  +L  V   L+ LG+  WRIN  V   +      K+++ +LP    LP+P
Sbjct:   73 AFNISTSNAANDDIFFQQSNDEFAFLRAKFDALPEFSGQLGESAEETAEKAAQAAAMIKRQLKIEEAQLLEASDLYQETFKNLAKMGRGTAMKSAQKLMLQWYEPLVVALKKEILAIRAG-------ELGTSSHFQH---YGPYLVQLPVEKLAVITLTTMLNCTLRNGNTGTKLVSIAMEISDMVEAESHVFYLKQEKEAPFWQKKLLDTSSRVANVRALNSFNNRLRKVAKGEMWTDAAKAKVGTKLIDVLLKTA--VDDKGVSAFVYSNNFYVQKLPYASKQTGQSMAVKRMGFVH--------------MEPAKFLEFSKLSLKD-STLLMPRYLPMLVPPKRW--DNREFSGAYFTMKAPMMKAIS-AQQRMAVRHGELNDVLDALDYLGQTGWRINPVVHTVIKDAWAAKLSIAELPGADPLPMP 473          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig103.306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU39_9PHAE0.000e+087.10DNA-directed RNA polymerase n=2 Tax=Ectocarpus Tax... [more]
A0A836CEF2_9STRA2.370e-6339.95DNA-directed RNA polymerase n=1 Tax=Tribonema minu... [more]
F0XZ85_AURAN1.850e-3631.78DNA-directed RNA polymerase n=1 Tax=Aureococcus an... [more]
A0A7S3JVN8_9STRA4.640e-3226.82DNA-directed RNA polymerase n=1 Tax=Aureoumbra lag... [more]
A0A7S2HVK7_9STRA5.470e-3229.66DNA-directed RNA polymerase n=1 Tax=Dictyocha spec... [more]
A0A7S1VRP7_9EUKA2.530e-2929.33DNA-directed RNA polymerase n=1 Tax=Sexangularia s... [more]
A0A0L0DM99_THETB8.180e-2830.70DNA-directed RNA polymerase n=1 Tax=Thecamonas tra... [more]
A0A0G4J6X7_PLABS8.020e-2531.15DNA-directed RNA polymerase n=1 Tax=Plasmodiophora... [more]
A0A3P3Y5Z4_PLABS1.060e-2431.15DNA-directed RNA polymerase n=1 Tax=Plasmodiophora... [more]
A0A7S3HMT1_9STRA1.840e-2427.84DNA-directed RNA polymerase n=1 Tax=Spumella elong... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig103contigEcto-sp13_S_contig103:32622..39293 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score1159.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FQU5
Preferred namerpom-1
Model size2154
KEGG koko:K00960,ko:K10908,ko:K11446
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0000959,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006351,GO:0006390,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034245,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098798,GO:0140053,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
Exons11
EggNOG free text desc.dna-directed rna polymerase
EggNOG OGsCOG5108@1,KOG1038@2759
Ec32 ortholog descriptionDNA-directed RNA polymerase, phage-type
Ec32 orthologEc-16_000770.1
EC2.7.7.6
Cds size2154
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03029,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig103.306.1prot_Ecto-sp13_S_contig103.306.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig103 32622..39293 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462521.8544471-CDS-Ecto-sp13_S_contig103:32621..327191681462521.8544471-CDS-Ecto-sp13_S_contig103:32621..32719Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 32622..32719 +
1681462521.8710575-CDS-Ecto-sp13_S_contig103:33148..332381681462521.8710575-CDS-Ecto-sp13_S_contig103:33148..33238Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 33149..33238 +
1681462521.8865983-CDS-Ecto-sp13_S_contig103:33615..341201681462521.8865983-CDS-Ecto-sp13_S_contig103:33615..34120Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 33616..34120 +
1681462521.8966663-CDS-Ecto-sp13_S_contig103:34517..348231681462521.8966663-CDS-Ecto-sp13_S_contig103:34517..34823Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 34518..34823 +
1681462521.9046438-CDS-Ecto-sp13_S_contig103:35261..353321681462521.9046438-CDS-Ecto-sp13_S_contig103:35261..35332Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 35262..35332 +
1681462521.9161448-CDS-Ecto-sp13_S_contig103:35767..359301681462521.9161448-CDS-Ecto-sp13_S_contig103:35767..35930Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 35768..35930 +
1681462521.925063-CDS-Ecto-sp13_S_contig103:36382..364811681462521.925063-CDS-Ecto-sp13_S_contig103:36382..36481Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 36383..36481 +
1681462521.9331927-CDS-Ecto-sp13_S_contig103:36844..369251681462521.9331927-CDS-Ecto-sp13_S_contig103:36844..36925Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 36845..36925 +
1681462521.9415116-CDS-Ecto-sp13_S_contig103:37355..376521681462521.9415116-CDS-Ecto-sp13_S_contig103:37355..37652Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 37356..37652 +
1681462521.95021-CDS-Ecto-sp13_S_contig103:38173..383801681462521.95021-CDS-Ecto-sp13_S_contig103:38173..38380Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 38174..38380 +
1681462521.9649374-CDS-Ecto-sp13_S_contig103:39056..392931681462521.9649374-CDS-Ecto-sp13_S_contig103:39056..39293Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 39057..39293 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig103.306.1

>prot_Ecto-sp13_S_contig103.306.1 ID=prot_Ecto-sp13_S_contig103.306.1|Name=mRNA_Ecto-sp13_S_contig103.306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=718bp
MHTVGARLRARAASLSGERSRVRRRCFSVFGDGDRGSHGSSEIAYGIGHT
SSLCVGSHRQVTWPTAQSVPPRPRRREKPGSTSTSTGTTVTAIRRSSNIS
QSREAASSLDHAEAEGGRRVLAMTDADFPRVLNGPAPGYAEDALRRLLLG
NLPAVAARAGSRRGALETAPVGAKEEAGRSVDCRIGKESGRVGGAATSES
TAPLARPAGWEGHVGAALSEGFSRESEEEDQAPAFSATSNQDGHTNGNAN
DQTAVRRCRPQKAFSSTAASAADVVYEEQDDFVDPLMQIPQAVDRGDKGE
DKDEVELPYSTLYQMQLDREDQSHQEACEKYGKMMKELMTMGKGTQMKSI
ERLLTAWYPALKESIEREQEAVWANLTDDDKVTVKTSGSFGGRGTYGPFL
VMLKADKQAVLVMHEVVNLILASGNKGVSTVRACTRVAELVQAEVNLMRM
KKKDGKKGKPVQVSSLRHVREINKQAQDALGMLEDTHWPIGAQVKLGAAL
IKVLIETACWTYDKESGVVTASDKGGVERGGDERDTEGFPMPKAAFVHDI
IKGKNSRKGSLTMAPEIFSKMVDEDISRLATPRFVPMLVPPLDWVKPNRG
GFLRLRAQIMRTKGEAAQKHALRRADLRQVYKGLNCLGKVRWRINGHVLD
TVMVCLRDKITVGDLPVIKDLPLPPCPDGVTVDRFGRLRAPVQGEHEDEE
AFRERRQKHYAYKRLLEK
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mRNA from alignment at Ecto-sp13_S_contig103:32622..39293+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig103.306.1 ID=mRNA_Ecto-sp13_S_contig103.306.1|Name=mRNA_Ecto-sp13_S_contig103.306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig103:32622..39293+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCACACGGTGGGAGCACGGCTGCGAGCGAGAGCGGCATCCTTGTCGGG GGAGAGAAGCAGAGTACGACGGCGATGTTTTTCTGTATTCGGGGATGGGT GAGTGCTGCCTTTGATCCACGTAAGAGTCAAAGCGTGTGCGTGGTCGATC AATGAACGCTTTGTACGCCACCCACCACGGCGGCACGTATCTCCGCCGTC TTTGCACCACTTGCCCTGCTGGCTTTTGCAGCACAACTCACCCATGTACC CGGTGGGCTTCTCAAGCGCTGTTGCAAGCTTGGTTCAAAGACTCCGTTGT TTGTTTGACAGGAAGCAATCGGATGGTGATAAGTGACGAACGCCACTTTC ATGACAACGATGTATCTGCCCTACTGCTGTACTGTTGTAGGTCAAGATGA CCGCTGCCGCGTGCGTTCACGCTACTGCTGTACATACACTGCCGTAGGTG ATACTTGACAACTACGAACGAAAGTTGAACACGGGTTTAATGCCCGCGAC TTCTTGAATACGCTGGCATGCAAACAGCGACCGCGGTAGCCATGGAAGCA GCGAGATCGCATATGGTATCGGGCACACCTCCAGCCTATGCGTTGGCTCC CATCGACAGGTCACCTGGTACGAATTTAGTCGTTCCACCAGAAAGACCAT CAAAGACGCTGCTGTCATTTTTCGGAGCTCAGAGCTGTGCTTGCTCACTA AAGCACCGCCCGCTTTTCTGTATGAGTCAAGTATGATGCGTGGTTTAAGC TCTCACAGCTCACATCAGTTAGGGTCGGGAGAATGTCTCAGAGGAATATA TCGAGCGCATGAATGAGAGCCCCCACATATTGGCGTCTCTACACCGGAGT AGTTGTACGGTACACGAGAAGAAAAGAGTCTCCACTCTGTCTTGGAGGGG GTGCGTGCCCAATACCCCGATTACTCGAGTCAAGCAAGTGATTCATGCGC CCCATGCCTGCCTCCGTACCGCGCGCTATGTATGAATTCATCAGGCCCAC CGCCCAATCTGTCCCTCCGAGGCCCCGCCGTCGTGAAAAGCCCGGCAGCA CTAGCACAAGCACGGGCACAACCGTCACCGCCATCAGGAGAAGCAGCAAC ATCAGTCAAAGCAGGGAGGCAGCCTCCTCCCTCGATCACGCCGAGGCGGA AGGAGGCCGACGGGTGCTGGCGATGACCGACGCCGATTTCCCGAGAGTCC TGAACGGACCCGCGCCTGGTTACGCCGAGGACGCACTTCGAAGGCTGCTG CTCGGCAACCTCCCCGCCGTGGCAGCGCGTGCAGGTTCTAGGAGGGGTGC TTTGGAGACGGCGCCAGTAGGAGCGAAAGAGGAGGCAGGCCGATCGGTTG ATTGTAGAATAGGGAAGGAGAGCGGTCGTGTTGGCGGGGCGGCGACGTCA GAATCGACGGCCCCTTTGGCGCGCCCCGCGGGGTGGGAAGGGCACGTTGG GGCCGCGCTGTCGGAAGGTTTTTCGCGGGAGTCCGAGGAGGAAGATCAGG TGATAAACTAGTTGTTTTGTTGTGGTGTTGACTGTCGTGTGTGTGCAATT GTGACCATTTCCCGTGTGCGACCAGAAGTATTCGATACCACGCGCCTTTG GGACATCGAAAGTAGGTGTAGCCGGGTGTAGTTTTGTATTCCAAGGGCGT TTGAAGTTTCCAACGAAAGTGTGCAAGACACGAGACGCGTGATCGTGCGG TAGGCTTATCAATCACTTCTGCTAATTCTTAGGAAATGGGTATATACGTG TCTCCTGCAACAGTTCCCATGAAGGCCATGTAGCCTTTGCTCTCAAAATT TGCGGAGATGGGAAGGCTACAATCTACGATATGTCGTTGTTGTGGCAGGC ATGTCATGTCTTTTGACCTTCCCGTCCTGCCATTCTGCACGCACAGGCGC CGGCGTTTTCGGCTACCAGCAATCAGGACGGTCACACCAATGGAAACGCC AATGATCAAACGGCAGTCCGACGATGCCGGCCACAGAAGGCGTTTTCGTC TACCGCTGCATCTGCTGCAGATGTGGTCTACGAAGAGCAGGATGACTTCG TCGACCCGCTGATGCAAATCCCTCAGGCTGTTGATCGCGGGGACAAGGGG GAGGATAAGGACGAGGTGGAGTTACCGTACAGCACGCTGTACCAGATGCA GCTGGACAGGGAAGATCAGAGCCACCAAGAAGCGTGCGAGAAGTATGGGA AGGTGGGTATGGTACCTGCCACACGGGACGTACAAAATGTAGGCGGGGGG TGATTGGCGGAGAGGGAGTTCGTGCACGTTTGTGCAGAGAGCGTTGCACT TCAAACAAGACGAGCACACGACGAAAACATGAAGAAGTATTGGACTTGCT TACTAGGTAGAACAATTGTGGCACCTTCTCGACCGAAAACATATGACTGC TGTATCATAGAAAACCGTCGACTTCGGAAGCTCAGCGGTGTTGGCGACAC AAGTCGTACTTCCCATCGTCAAAACCCCAACGGTTGCGTGAAAGATGGCG ACTCTTTTTAAGAGAATGCCGCTCTCTTGCTCACTTGTCTTTCAATCAGG TGACGTGGTTTACGTCACGTCGGATGCTACTCCTGTGTGGTGTATCGGTT AACCGGGCTTGTCTATGTCTTTATGGTGTGATTCGAGCAGATGATGAAGG AGCTCATGACCATGGGCAAGGGCACGCAGATGAAGTCCATCGAGCGGCTT CTCACCGCGTGGTACGTTGACTTTCCAAGCATTCCAATAGGCCATGTATA GAATCTGGCTTGGCCTCGCTGCCTGTCGGGGCTTGGGTTAGGGTGAAAGT GTTGCAAATTCGGTTCATCTGTTGAACTTGCGGCGCTGTGAGCAGCATAG TTCGTGATGTAGACGTGAGGTGAGCAAAGCCACCTCGTATAGTACCAAGC TCTCGGTTGCTCGATGTCCAGTTACCTGTGCCTATGGTCTCCTCGGTCTC CTACCTTTCACCCTAGCCCTAGATACCCGAGTAGCAAGCACCGGTGTCAC TTTTATGCTTCGTCAAGCACCGCTGACACCCTGCCTTCCAGCCTGCGTTC CAATGTACCCCGACTTCCCCCCTTCCCTCTCCTCTCTTGGACCGATCGAT CACCGATCACGCTCGTCTTCGCTGGGGTTGATCCCATCGTCAAAAGGTAT CCGGCTTTAAAGGAGAGCATCGAGAGGGAGCAGGAGGCGGTGTGGGCAAA CCTCACGGATGACGACAAGGTGACCGTCAAAACCAGCGGCTCTTTCGGTG GCCGCGGCACGTACGGGCCTTTTCTGGTGATGCTCAAGGCGGACAAGCAG GCCGTGCTGGTGAGGGCGAGAGAGGTGCTTTTATACACGCGAAAAGAAAG AGGAAGAAGTTGTTGGGAGGGGGGGTAGTCTGGCGTTCCTGGCTTGCCGT TGACCGTTGCTCCACTCATCGACTACGTTCCTTTTTGGTGCTGATGGAAA AGGAGGGGTAGGGCAGGCTGTAAGGGTACTGGCACGTCCACGGGGCGGGG CGTATTTGAATCTTGACGCGCTTTCTCGCCTCAACTTCGTAACGTTTTTT CTTTCTTGCTTGGGCGTACGGCCGCTGGTCTTCATTCCTCCTTGTGTTGG TTGGTGTGATGGCTGGATGTTTCCAGGCGTGCCAAGGCCTGGCTGGCTTA GATGAGTCCTTCCGGCAAGCGGCTACGACTGACGATCGACGTACACATGG CCTACAGTACCATTATGACATACCAACAACACTATGCGCACGCTGTATCC TGCTTTGATAGGTGATGCATGAGGTGGTGAATCTCATCCTCGCCAGCGGA AACAAAGGGGTTTCCACCGTAAGGGCGTGCACTCGCGTCGCCGAACTAGT GCAGGCAGAGGTAAGATCGTTTCGCAGCAACAGCCATCATGTGGCAGTAA GACAGTAAGAAGAGGGGCAAGGTGACTGGAGGCTAGCCGAACGGCGATTG AGAATTTGTGGGTAGAGGCAGCGCCGATAGAGCCTACCGGGATTTCACTA GTCTCCAATTCCCTGTATCTTTTCCATTGATACACCCACCCACCACGTCA GTTTGCAGAGCGACTAGCACGGCAATGACAACGTCAGGCATGGCAATGGC ATGTCAAGGGGCGTTGGGGTGGGTGCGCCCAAGAGGTCAAGAATCGTCGT TGTTGCAACCTTCACGGGAAGCACGTTGCGCTGTTGGGGGTTTGTCGTCC TTGTCGTCGTTGTTTTGGTCAAGGTGAACCTGATGAGGATGAAGAAGAAG GACGGCAAAAAAGGCAAGCCCGTGCAAGTCAGCAGCCTGAGACATGTCAG AGAGGTGCGTGCGTTTCTGCGCGGTGGGTGCTGCTTCATGGAATGCGGTG TTGTTGTTTGTTGTTGTTGCTTTCATCATTCCATCATCGCTGGAGTATTT GTCACAGTGGGCCTGCGCTACAACAGCATTCGTAGGCATGACAGCAGTGC AGCGTGCTGCCTTGATGACAGGCCTATTGTGTACAGGACTTTGGGAGAAG ATTACGGCATGCCGCTGGAGCAGAGAACCGCTTGGCCGTCTGGTGCCGCT TCTTGCCTGTCATCCCTGCACCAAGAGCATGTTTGGTGCTAAAGGGTCGC TGAGTTCTTCTCGAGCTTACCGTTCTGCCCATCAATGTATTCCTAACTCT CTGATCGTCTTGGTACTGTTTTTGTCTTTTTTTTCATTCACTCCTTGTTC TCAACCTGCTTCGTGGGGACGGACATTCCAACAGATCAACAAGCAAGCCC AGGACGCGCTGGGCATGCTGGAGGACACGCACTGGCCGATCGGCGCTCAA GTAAAGCTAGGCGCGGCGCTGATCAAGGTGCTCATAGAGACGGCTTGTTG GACGTACGACAAGGAGAGCGGCGTGGTGACGGCGTCGGACAAGGGGGGAG TGGAGAGAGGGGGTGATGAGCGGGACACGGAGGGGTTTCCAATGCCAAAG GCGGCATTCGTTCACGACATTATCAAGGGCAAGAATAGCCGGAAGGGGAG CTTGACCATGGCGCCGGAGATCTTTTCAAAGGTGACTGACTCGTGTGTTG CTTCTGCTCCTTGCCTGTTTTCTTTTGGCAGTTTCCAGTAGAGACGGGTA GACCACTGCTTCGGTTTTGTGTCCCGCGGCGAGCAAAGGGTATCTACGTA AACAGCCGGCTGGGTTGTTGAAATGAAAACATCCAAGTCTGTGTTGTATC ATACTTGTAGTAGCTTGACTCAGTGGCGGCCGTGATCGACTTGCGCCACG ACTCGCGATACCTTTGCTCCTGCCCTCCCTTGCCTGTCCTACGTGCGGAC GTGAAAGCTTGAATGTCGCTCGATTTCGCAGCAGTTGCCCTTCTTAATCT AACACCCAGATCCCTGGCATGTGCGTTTTTCGTGTTTGGAGGTTACCTTC ACATTCTTTACGTACATTATCCTTCCACTCTTGCCCTAGCTATCGCATGC CTCGCTACAATACCCGCACCACTTAGCACCCCCCGCCCCCTCCCATTTTC ACCACCACCGTCTTGACCTTTTCATGGTAACGTGCTTCGCGTCGCGTGGC AGATGGTAGACGAGGACATCAGCAGGCTAGCCACGCCGCGGTTCGTGCCG ATGCTGGTGCCCCCTCTGGACTGGGTTAAGCCTAACCGGGGGGGCTTTCT CCGACTGCGTGCGCAGATCATGCGCACGAAGGGAGAGGCGGCACAGAAGC ACGCCTTGAGGAGAGCAGACCTGAGGCAGGTCTACAAGGGACTCAACTGT CTTGGGAAGGTGGGGTACGGCACATATAAATAGCCTCGTGGCCTCTGACC CCACCGAACGCCATAGTTGAAACACGGAATATGGGCCCGAGAGAGACAAA AGTCATGTGTTGTTGTTTATTGGCGGTCTAGGCAAAGGTGATCCGCTTTG GTTGACGATAATCTTGGGATGGTGAAGAGAGGTGATTTTTGTGTCACTTT TGAGAGCCAGTATTGTACGCATACGTCATCCTTACCCTTACCCTTGCCAT GCCCCCGGAGGACACACACACGTCCCAAGTAGAGGCTTCGCTTGTGCGAT TGGCGTTGCGTTGAAAGCATCCACGACCGAACGAACGAACGAATTGATTC AGTCAGGTCCTACAATACATGCATGCTGTGTCTTTGATCATTTCATGTGG CGTGACGAAAGGTTGACGCAACAAAAATAAGTTTTGCGTCAAAATATCGA ACCGCCTACAGCGGGTACCGTTTCTGTGCACGTGACGTGTCCTTCATGTG TCCTAGGTACAGCTGATGCATTGAAAAGGCGCACCTCTGTCTATCTACAC TCTTTGGTTCACAGCAATCAACCAATCGATGTCCCCTACACCGACATCGC TTGATGCATTCTTCCCATTTGATCAACACCATCGATCATGAGATACTGCT GTACTGCGCTACTCTATGGTACCTTAACTGAACAGGTTCGGTGGCGCATC AACGGGCACGTGTTGGACACGGTGATGGTGTGCCTGAGGGATAAGATTAC GGTGGGCGACCTGCCGGTGATCAAAGACCTGCCCTTGCCGCCCTGCCCGG ACGGCGTGACCGTGGACCGATTTGGCAGGCTGAGGGCACCCGTACAGGGG GAACACGAGGATGAGGAGGCTTTCAGGGAGAGACGGCAAAAGCACTATGC GTACAAAAGGTTGCTCGAAAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig103:32622..39293+

>mRNA_Ecto-sp13_S_contig103.306.1 ID=mRNA_Ecto-sp13_S_contig103.306.1|Name=mRNA_Ecto-sp13_S_contig103.306.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2154bp|location=Sequence derived from alignment at Ecto-sp13_S_contig103:32622..39293+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCACACGGTGGGAGCACGGCTGCGAGCGAGAGCGGCATCCTTGTCGGG
GGAGAGAAGCAGAGTACGACGGCGATGTTTTTCTGTATTCGGGGATGGCG
ACCGCGGTAGCCATGGAAGCAGCGAGATCGCATATGGTATCGGGCACACC
TCCAGCCTATGCGTTGGCTCCCATCGACAGGTCACCTGGCCCACCGCCCA
ATCTGTCCCTCCGAGGCCCCGCCGTCGTGAAAAGCCCGGCAGCACTAGCA
CAAGCACGGGCACAACCGTCACCGCCATCAGGAGAAGCAGCAACATCAGT
CAAAGCAGGGAGGCAGCCTCCTCCCTCGATCACGCCGAGGCGGAAGGAGG
CCGACGGGTGCTGGCGATGACCGACGCCGATTTCCCGAGAGTCCTGAACG
GACCCGCGCCTGGTTACGCCGAGGACGCACTTCGAAGGCTGCTGCTCGGC
AACCTCCCCGCCGTGGCAGCGCGTGCAGGTTCTAGGAGGGGTGCTTTGGA
GACGGCGCCAGTAGGAGCGAAAGAGGAGGCAGGCCGATCGGTTGATTGTA
GAATAGGGAAGGAGAGCGGTCGTGTTGGCGGGGCGGCGACGTCAGAATCG
ACGGCCCCTTTGGCGCGCCCCGCGGGGTGGGAAGGGCACGTTGGGGCCGC
GCTGTCGGAAGGTTTTTCGCGGGAGTCCGAGGAGGAAGATCAGGCGCCGG
CGTTTTCGGCTACCAGCAATCAGGACGGTCACACCAATGGAAACGCCAAT
GATCAAACGGCAGTCCGACGATGCCGGCCACAGAAGGCGTTTTCGTCTAC
CGCTGCATCTGCTGCAGATGTGGTCTACGAAGAGCAGGATGACTTCGTCG
ACCCGCTGATGCAAATCCCTCAGGCTGTTGATCGCGGGGACAAGGGGGAG
GATAAGGACGAGGTGGAGTTACCGTACAGCACGCTGTACCAGATGCAGCT
GGACAGGGAAGATCAGAGCCACCAAGAAGCGTGCGAGAAGTATGGGAAGA
TGATGAAGGAGCTCATGACCATGGGCAAGGGCACGCAGATGAAGTCCATC
GAGCGGCTTCTCACCGCGTGGTATCCGGCTTTAAAGGAGAGCATCGAGAG
GGAGCAGGAGGCGGTGTGGGCAAACCTCACGGATGACGACAAGGTGACCG
TCAAAACCAGCGGCTCTTTCGGTGGCCGCGGCACGTACGGGCCTTTTCTG
GTGATGCTCAAGGCGGACAAGCAGGCCGTGCTGGTGATGCATGAGGTGGT
GAATCTCATCCTCGCCAGCGGAAACAAAGGGGTTTCCACCGTAAGGGCGT
GCACTCGCGTCGCCGAACTAGTGCAGGCAGAGGTGAACCTGATGAGGATG
AAGAAGAAGGACGGCAAAAAAGGCAAGCCCGTGCAAGTCAGCAGCCTGAG
ACATGTCAGAGAGATCAACAAGCAAGCCCAGGACGCGCTGGGCATGCTGG
AGGACACGCACTGGCCGATCGGCGCTCAAGTAAAGCTAGGCGCGGCGCTG
ATCAAGGTGCTCATAGAGACGGCTTGTTGGACGTACGACAAGGAGAGCGG
CGTGGTGACGGCGTCGGACAAGGGGGGAGTGGAGAGAGGGGGTGATGAGC
GGGACACGGAGGGGTTTCCAATGCCAAAGGCGGCATTCGTTCACGACATT
ATCAAGGGCAAGAATAGCCGGAAGGGGAGCTTGACCATGGCGCCGGAGAT
CTTTTCAAAGATGGTAGACGAGGACATCAGCAGGCTAGCCACGCCGCGGT
TCGTGCCGATGCTGGTGCCCCCTCTGGACTGGGTTAAGCCTAACCGGGGG
GGCTTTCTCCGACTGCGTGCGCAGATCATGCGCACGAAGGGAGAGGCGGC
ACAGAAGCACGCCTTGAGGAGAGCAGACCTGAGGCAGGTCTACAAGGGAC
TCAACTGTCTTGGGAAGGTTCGGTGGCGCATCAACGGGCACGTGTTGGAC
ACGGTGATGGTGTGCCTGAGGGATAAGATTACGGTGGGCGACCTGCCGGT
GATCAAAGACCTGCCCTTGCCGCCCTGCCCGGACGGCGTGACCGTGGACC
GATTTGGCAGGCTGAGGGCACCCGTACAGGGGGAACACGAGGATGAGGAG
GCTTTCAGGGAGAGACGGCAAAAGCACTATGCGTACAAAAGGTTGCTCGA
AAAG
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