mRNA_Ecto-sp13_S_contig13906.3053.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13906.3053.1
Unique NamemRNA_Ecto-sp13_S_contig13906.3053.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Match: D7G8J8_ECTSI ([Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8J8_ECTSI)

HSP 1 Score: 605 bits (1561), Expect = 8.830e-216
Identity = 285/288 (98.96%), Postives = 287/288 (99.65%), Query Frame = 1
Query:    1 EFCSTELGSQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDKPGYRICGAEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPPYPV 864
            EFCSTELG+QFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDKPGYRICGAEFAKSSVEYDIIRLTAGLQQDK IPV+PCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPPYPV
Sbjct:  229 EFCSTELGAQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDKPGYRICGAEFAKSSVEYDIIRLTAGLQQDKQIPVRPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPPYPV 516          
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Match: A0A835YIW4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIW4_9STRA)

HSP 1 Score: 353 bits (907), Expect = 4.540e-117
Identity = 173/288 (60.07%), Postives = 202/288 (70.14%), Query Frame = 1
Query:    4 FCSTELGSQFC-QSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDKPGYRICGAEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPPYPV 864
            FC +E G   C Q G VR  FV E E+LGPAVARY ASKLW GE YFMQID+HSLF   WDT  V D+ NTPSYP S L+HYPP       D+P +RICGA+FA S +E  I+RLT   + +      PC APFIGAG+ FAH+SFLA +PFDPYVPWVFMGEEIL SLR+ TWGYDIYSPT N  SH YVR+H PKFWETV RLFKKP +HN +   IINRVK   GYPESS E  +  TLL +  LYG+G +RP+ EYM   GLD  +K A  + WC+KC+ P P+
Sbjct:  182 FCESEQGRGRCGQDGQVRHLFVNESESLGPAVARYFASKLWHGENYFMQIDSHSLFTSGWDTFPVTDMKNTPSYPRSALTHYPPDKNRPNYDQPAHRICGAKFADSDIESQIVRLTVSDRFEVDFRTVPCRAPFIGAGYVFAHASFLALMPFDPYVPWVFMGEEILFSLRLHTWGYDIYSPTHNTASHFYVRQHKPKFWETVGRLFKKPGIHNAIQGYIINRVKYFIGYPESSKE-QVDATLLVHSHLYGEGPIRPLAEYMAMAGLDPVSKEAVKVDWCYKCEAPRPM 468          
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Match: A0A6U4ERP7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4ERP7_9STRA)

HSP 1 Score: 310 bits (794), Expect = 1.530e-99
Identity = 147/286 (51.40%), Postives = 201/286 (70.28%), Query Frame = 1
Query:    4 FCSTELGSQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPP--SVGVNFEDKPGYRICGAEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPP 855
            FC +E+G ++C  G VR+F V E E+LGP  ARY+ASKLW GE YFMQIDAH  F  +WD  LV D+   P+   +VLSHYPP  +    +  +  YR+CGA F++S +EY+I+R+ A  +++      P  AP++ AGFF  HSSFL D+PFDP +P+VFMGEE++ +LR WTWG+DI+SP+RNVL H Y RRH PKFWETVNR F+ P+ HN  T+++I+R K+IAGYPES+A+ +   + L +LD+YG G  R +EE++E VGLD+  K+A  + WC    PP
Sbjct:  198 FCKSEMGQKYC--GQVRNFLVPEPESLGPTGARYLASKLWFGEQYFMQIDAHMDFGKNWDAYLVEDMKRAPTR-KAVLSHYPPIANPAQPWTKQGTYRMCGATFSESPIEYNIVRIDASAERESGPVQYPLYAPYVAAGFFMTHSSFLRDIPFDPLLPYVFMGEELMLTLRFWTWGWDIFSPSRNVLGHWYTRRHKPKFWETVNRRFRLPNFHNKFTNIMIHRPKHIAGYPESAADKVTVESALSDLDIYGAGPERSVEEFLEHVGLDVVAKKASKLHWCELGMPP 480          
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Match: A0A7S3Y0Q3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0Q3_HETAK)

HSP 1 Score: 301 bits (770), Expect = 1.180e-98
Identity = 147/290 (50.69%), Postives = 195/290 (67.24%), Query Frame = 1
Query:    1 EFCSTELGSQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSY-PMSVLSHYPPSVGVN-FEDKPGYRICGAEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPPYPV 864
            EFC++  G + C +G VR FF+ E E+LGPA ARY A+KLW GE++F QID+H  F   W+  L+++ H  P+  P  VL+HYPP+ G + ++ + G RIC   FA S +E  I+RL A    D+ +   P  APFI AG FF H SFL D+PFDP +PW+FMGEEIL SLR WT G+DI+SP +NVL+H+YVRRH PKFWETV R+F +P +HN +   +++RVKNI GYPE+  +I+  PTLL   DLYG G+ R M+ +   VG+D  TKR +   WC K  PP  V
Sbjct:   23 EFCASPQGREACAAGRVRHFFINETESLGPAQARYFAAKLWEGESWFFQIDSHCTFAEGWEQELIDEYHACPTTNPKRVLTHYPPAPGGDAWKKRVGMRICDPLFATSDIESQIVRLNAAQFYDREMTT-PRFAPFIAAGMFFTHGSFLGDIPFDPLMPWIFMGEEILLSLRFWTNGWDIFSPKKNVLTHYYVRRHKPKFWETVGRVFGRPGIHNPIQLKVMDRVKNILGYPETHDDIVYPPTLLAYKDLYGVGNKRRMDHFYSMVGIDTQTKRVQIPQWCHKGIPPPQV 311          
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Match: A0A835YK79_9STRA (Glycosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK79_9STRA)

HSP 1 Score: 298 bits (762), Expect = 2.520e-98
Identity = 145/241 (60.17%), Postives = 171/241 (70.95%), Query Frame = 1
Query:  142 MQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDKPGYRICGAEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPPYPV 864
            MQID+HS FV  WD+  V D+ NTPSYP S L+HYPPSV     D+P +RICGA+FA S +E  I+RLT   + ++     PC APFIGAG+ FAH+SFLA +PFDPYVPWVFMGEEIL SLR+ TWGYDIYSPT N  SH YVR H PKFWETV RLF++  +HND+   IINR K I GYPESS+E  +  TLL + D+YG G  RP+ EYM  VGLD   K A  I WC KC+ P PV
Sbjct:    1 MQIDSHSQFVSGWDSFPVTDMKNTPSYPYSALTHYPPSVDWPNYDEPAHRICGAKFADSDIESQIVRLTVTARFEREFQTVPCRAPFIGAGYVFAHASFLAVMPFDPYVPWVFMGEEILFSLRLHTWGYDIYSPTHNTASHIYVREHKPKFWETVGRLFQQDGIHNDIQGYIINRPKYIIGYPESSSE-QVDATLLAHTDVYGVGPKRPLAEYMAMVGLDPVAKEASRIDWCVKCEAPRPV 240          
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Match: A0A482SQ18_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQ18_9ARCH)

HSP 1 Score: 297 bits (760), Expect = 3.210e-94
Identity = 146/287 (50.87%), Postives = 194/287 (67.60%), Query Frame = 1
Query:    1 EFCSTELG--SQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDKPGYRICGAEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPP 855
            +FCS+  G  S  C+   VR F V E E+LGP +ARY+ SK + GE Y++QID+HS FV +WD  L++ +  T      V+S YPP    N+ D  GYR+C +EFA + +E+ IIRL   L  D+ IP KP  APF+ AGFFF  +  L +VPFDP++PW+FMGEEI  S R+WT GYDI+SPT NVL+H+YVRRH PKFWE+VNR F KPS+HND+  +IINRVK + GYPES  E++   ++L   D +  G  R +E+YM+ VGLDMT K+ +   WC K + P
Sbjct:  239 DFCSSPEGIKSHACERNQVRLFNVNESESLGPYMARYLGSKFYRGEQYYLQIDSHSEFVSNWDEKLIHMVE-TAEAEKPVISTYPPDSKTNWRDTIGYRMCDSEFASAQIEWQIIRLGTSLPFDRKIPEKPKYAPFVAAGFFFGPAELLHEVPFDPFLPWIFMGEEISVSARLWTSGYDIFSPTINVLNHYYVRRHYPKFWESVNRFFGKPSIHNDIVELIINRVKYMLGYPESKLELVHPSSILFRQDDWSMGRKRSLEQYMKMVGLDMTGKKTRKNMWCHKGEWP 524          
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Match: B7G2Q2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2Q2_PHATC)

HSP 1 Score: 288 bits (737), Expect = 3.660e-90
Identity = 139/287 (48.43%), Postives = 187/287 (65.16%), Query Frame = 1
Query:    4 FCSTELGSQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDKP---GYRICGAEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPP 855
            FC TELG   C +  VR   + E E+LGP  ARY ASKLW GE ++MQIDAH  F  HWD   +N +H  PS    +LSHYPP    N + +    G R+CG  FA S +E  I+RL  G   D+ +   P  APF  AG+F AHS FL  VPFDP++PW+FMGEEI+ S R+WT GYDI+SP+++V+ H YVRRH PKFWE+V+RL     +HN L +M++ R+K   GYPE+S ++++  +LL  ++ YG G+ RP+EEY+  VGL++TTK   +  WC +  PP
Sbjct:  286 FCDTELGMPICANQQVRVLNINEPESLGPYAARYFASKLWYGEQWYMQIDAHMTFATHWDQISINMLHKAPSA-KPILSHYPPGHTANLDHRSNIAGARLCGPVFATSDLESQIVRLEGGRVYDRTLLEYPAFAPFTAAGYFVAHSDFLRQVPFDPFLPWIFMGEEIIMSSRLWTAGYDIFSPSQSVVGHIYVRRHKPKFWESVHRLLSY-GIHNPLQAMVLERIKFQLGYPEASRDMIVHKSLLTAVEQYGMGNERPLEEYLRLVGLNVTTKEITYTGWCEEGYPP 570          
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Match: A0A7S1GHW0_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GHW0_CYCTE)

HSP 1 Score: 278 bits (711), Expect = 3.000e-89
Identity = 139/287 (48.43%), Postives = 181/287 (63.07%), Query Frame = 1
Query:    4 FCSTELGSQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFED---KPGYRICGAEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPP 855
            FC +  G   C  G+VR   + E E+LGP  ARY ASKLW GE +FMQ DAH  F+  WD   V  ++  PS    VLSHYPPS   +       P  R+CG  FA S +E  IIRL    + D      P  APF  AG+F AHS FL +VPFDP++PW+FMGEEI+ S R+WT GYDI+SP+++V+ H YVRRH PKFWE+V+R F  P +HN L +MI+NRVK   GYPE++ ++L   TLL  ++ Y  G  RP++EY+  VGLDM +K+  +  WC   +PP
Sbjct:   49 FCESPEGRDLCAKGHVRALHIDEPESLGPYAARYFASKLWYGEQWFMQTDAHMTFLKDWDAISVEMLNKAPSS-KPVLSHYPPSHMADLAGMAKSPASRLCGPVFATSDLENQIIRLEGASRYDSFQAETPRFAPFTAAGYFVAHSEFLREVPFDPFLPWIFMGEEIIMSTRLWTAGYDIFSPSQSVVGHIYVRRHKPKFWESVHRAFT-PGVHNPLQAMILNRVKYQLGYPEAAKDMLKPKTLLTAVEQYSMGTARPLDEYLRLVGLDMVSKQVTYTEWCETGKPP 333          
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Match: A0A7S0XEV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEV2_9STRA)

HSP 1 Score: 273 bits (699), Expect = 5.670e-88
Identity = 137/273 (50.18%), Postives = 188/273 (68.86%), Query Frame = 1
Query:    1 EFCSTELG--SQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDKPGYRICGAEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTK 813
            EFCS++ G  S  C +  +R F V E E+LGP +ARY+ +K + GE Y++QID+HS FV +WDT L+  +H+ P+    VLS YPP    N++D PG+++C +EFAKS +E+ IIRL A       IP +P  APF+ AGFFF     LA+VPFDP +PW+FMGEEI  S R+WT GYDI+SP  NVL+H+YVRRH PKFWE+VNR FKK S+HNDL  ++I RVK++ GYPES  E++   ++L   + +G G  R  + Y++ VG++  TK
Sbjct:   36 EFCSSKEGIASNACVNNQIRLFNVNESESLGPYMARYLGAKWYRGENYYLQIDSHSEFVKNWDTKLIRMLHDAPAK-KPVLSTYPPGQDFNWKDTPGFKMCNSEFAKSQIEWQIIRLDAS-GPSLSIPKEPPYAPFVAAGFFFTIGDVLAEVPFDPLLPWIFMGEEISMSSRLWTSGYDIFSPPSNVLNHYYVRRHYPKFWESVNRFFKK-SIHNDLVEIVIKRVKHMLGYPESRLELISPLSVLYRAEDWGMGSKRSFDVYLKMVGIEPITK 305          
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Match: A0A1Z5K431_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K431_FISSO)

HSP 1 Score: 277 bits (709), Expect = 2.340e-86
Identity = 139/287 (48.43%), Postives = 185/287 (64.46%), Query Frame = 1
Query:    4 FCSTELGSQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDK---PGYRICGAEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPP 855
            FC ++LG ++C    +R   + E E+LGP  ARY  SKLW GE +FMQIDAH  F  HWD+  +  +   P+ P  VLSHYPPS  V+ + +   P  R+CG  FA S +E  IIRL      DK     PC APF  AG+F AHS FL +VPFDP++PW+FMGEEI+ S R+WT GYDI+ P + V+ H YVRRH PKFWE+V+R+F    +HN L +M+++RVK   GYPES+ ++L   ++L  +D Y  G  RP+EEY+  VGL+MTTK   +  WC +  PP
Sbjct:  253 FCESDLG-KYCDQ--IRVLNINEPESLGPYAARYFTSKLWYGEPWFMQIDAHMTFATHWDSISIEMLKACPA-PKPVLSHYPPSHTVDLDKRTKLPTSRLCGPVFATSDLESQIIRLEGAAVYDKEKAPLPCFAPFTAAGYFVAHSDFLREVPFDPFLPWIFMGEEIIMSSRLWTAGYDIFGPNQAVVGHMYVRRHKPKFWESVHRMFTN-GVHNPLQAMVLDRVKYQLGYPESARDMLPHKSILTAVDHYTMGTARPLEEYLRLVGLNMTTKEVTYSGWCEEGTPP 534          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13906.3053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8J8_ECTSI8.830e-21698.96[Skp1-protein]-hydroxyproline N-acetylglucosaminyl... [more]
A0A835YIW4_9STRA4.540e-11760.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U4ERP7_9STRA1.530e-9951.40Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3Y0Q3_HETAK1.180e-9850.69Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YK79_9STRA2.520e-9860.17Glycosyltransferase n=1 Tax=Tribonema minus TaxID=... [more]
A0A482SQ18_9ARCH3.210e-9450.87Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
B7G2Q2_PHATC3.660e-9048.43Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1GHW0_CYCTE3.000e-8948.43Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
A0A7S0XEV2_9STRA5.670e-8850.18Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A1Z5K431_FISSO2.340e-8648.43Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13906contigEcto-sp13_S_contig13906:710..4264 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score608.6
Seed ortholog evalue1.5e-171
Seed eggNOG ortholog2880.D7G8J8
Model size867
KEGG koko:K12244
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Glycosyltransferase (GlcNAc)
EggNOG OGs2ADDX@1,2RYTE@2759
EC2.4.1.229
Cds size867
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01003
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13906.3053.1prot_Ecto-sp13_S_contig13906.3053.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13906 710..4264 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462742.090667-CDS-Ecto-sp13_S_contig13906:709..8021681462742.090667-CDS-Ecto-sp13_S_contig13906:709..802Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13906 710..802 -
1681462742.1022797-CDS-Ecto-sp13_S_contig13906:1640..18031681462742.1022797-CDS-Ecto-sp13_S_contig13906:1640..1803Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13906 1641..1803 -
1681462742.1114225-CDS-Ecto-sp13_S_contig13906:2020..22421681462742.1114225-CDS-Ecto-sp13_S_contig13906:2020..2242Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13906 2021..2242 -
1681462742.1210182-CDS-Ecto-sp13_S_contig13906:2837..30171681462742.1210182-CDS-Ecto-sp13_S_contig13906:2837..3017Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13906 2838..3017 -
1681462742.1292512-CDS-Ecto-sp13_S_contig13906:3257..33651681462742.1292512-CDS-Ecto-sp13_S_contig13906:3257..3365Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13906 3258..3365 -
1681462742.1389387-CDS-Ecto-sp13_S_contig13906:4163..42641681462742.1389387-CDS-Ecto-sp13_S_contig13906:4163..4264Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13906 4164..4264 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13906.3053.1

>prot_Ecto-sp13_S_contig13906.3053.1 ID=prot_Ecto-sp13_S_contig13906.3053.1|Name=mRNA_Ecto-sp13_S_contig13906.3053.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp
EFCSTELGSQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQI
DAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDKPGYRICG
AEFAKSSVEYDIIRLTAGLQQDKHIPVKPCPAPFIGAGFFFAHSSFLADV
PFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWE
TVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYG
DGDVRPMEEYMERVGLDMTTKRAKHISWCFKCQPPYPV*
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mRNA from alignment at Ecto-sp13_S_contig13906:710..4264-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13906.3053.1 ID=mRNA_Ecto-sp13_S_contig13906.3053.1|Name=mRNA_Ecto-sp13_S_contig13906.3053.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3555bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13906:710..4264- (Ectocarpus species13 EcNAP12_S_4_19m)
GAATTCTGCTCTACGGAGCTGGGTTCGCAGTTTTGCCAATCGGGCAACGT GCGAGATTTTTTCGTCCAGGAGGAGGAGGCGTTGGGGCCGGCGGTGGCGA GGTGACGTGACAAGATAGAGAGAATATAGCACCAGTACAGCATGAACAAC CGACGACGGAGTGGGCTATGTACGAAATCGGTCGAAAATAGGAATGGGTC TTGTGCGCACACATTCACGGTCGTTACGGGGCGTTGAACAACAGCCTACA GGAGGGCAACGGATGTAGCGGTCGAAATTAGAATAGTTGCTCCCCCCATT CCCTGAAGAGACTTGAACGCATTCCCTTCGACTGTGGCGCACGCCTTGTG TCGGCTGTTGCTGGTACGAAACCCTTATCTGATAGCACTCTACCCAACCT CAACCTGACATGGTGATGGTGGGTTCAAGGTGGATTGGGCAGGGGTACGC ATTAGACTCGTGAGTCTCGTACCAATGGTCGAAGGTAAGTAATTTTCCCC GAAACATTCCCTGCAGCAGAGCTGAAGACCACAGAGTGACCAAAACAAAA GTGCAGGCTGAGTAATACTGGAGATATTTTGTCCAAGTTTTGGGTTGTGG GCCTTTCGCCACCGAGGATTTTCTACGTTGAAGACAGGACAACAAGTAAA AGACAGCAACCGCTCTTTCTGGAATAATGAGGTGGTGAGGACTTAAAGGG CTGCACGAAAAAAGGCAAGCACGTCACTTCGCGGGCACGGACGGTGTGAC GTGTTCTTGCATCCCCGGGTTGGTGTGAGTTGTTACTATCCCTTGCTGTG TTGTTAATCCGTGATAGTGCTCCTGCTGCTCTGCTCGTGCTGCTGCTTCT GCTACCTGCCTCTGCCACCGCCGTCTTTACACGTCTCCCGGCTCTTCAGA TACATGGCGTCGAAGCTCTGGATGGGCGAGACTTACTTCATGCAGATCGA CGCGCACAGCCTGTTCGTGCCTCATTGGGACACGACGCTCGTAAACGATA TCCACAAGTGAGTGCCTTCCCGGCATGATAAGGGAAAGGGATCGGCGGCA AGGAAAGGAGGAGCACAAAGAGGGAGTGGGGAGAGGAGACGCAAGAGCCG CAGCGTTTCAATTACTCGTAAAATATTGCTACAGGCACAGGCACCTAAGT TTACCCATTTTTGGCTAGAGAATTGGTTGCGCACACGAAGTTTTTTAGTC TTTTGCTGCCCGCTCTTCTTCATGCGTGATTTTCTTGCCGTGCCCAGCAC CCCGTCGTATCCGATGTCGGTCCTGTCGCACTACCCCCCGAGCGTCGGCG TGAACTTCGAAGACAAGCCGGGGTACCGAATATGCGGCGCCGAGTTCGCA AAGAGCAGCGTCGAGTACGACATTATTCGGCTCACGGCGGGTCTCCAGCA GGACAAGCATATACCGGTGAAACCCTGGTGAGATGAGATACATCATAGAT GGCGTCTGCCGTGGGGTGGCGCATGCATGAGTGCATTTCTGGAGTGATGC CTTCGCTTTAATTTTCTTTTATTTTCTGTTTTTTTTTTTCTGCCTCGTCG CCACTGGAAGGGCCAAGAACGAACGATGAATGAGACGTGAAGAATGCACA TGCGCATGGTACGTAAGAGGGGGATGAACCGCGCATTGTTTGGTTCGGTT CCCGCCCCCCCTTTGTGGAATCGTGGTGTGCCCGGCAGCGGGGTCAAAAT GTTGAGTCGGCAAACCCAGTTGATCGCAACCGTCCGACGGGAAGACGCAG CAAGCACATGAAAGACAAGAACCGAGCCTCCCCGCATCTCCCACCCGCTC GTGGCATCTGCGTGAGCTCGAAAAACCATCAATAAAAAAAATCAACAGGC CCGAGTTTCGAAGCTTCCGACAGTCATGCATCACCCCCGCGCCTGACGAT CTTTTCTTCTTCTTGGTTCCAACTTACCCCTCCTTCCTTATCCTCACGGC GGCGCACAACAACTAAACCAACAACCAATCGTCACGGGACGATAACGGCA ACGGCGAAAAAATACACGACAGTCCCGCCCCTTTCATCGGCGCGGGCTTC TTCTTCGCGCACTCGAGCTTCCTGGCCGACGTGCCCTTCGACCCTTACGT GCCGTGGGTGTTCATGGGCGAGGAGATCCTGGAGAGCCTCCGAATGTGGA CGTGGGGCTACGACATCTACTCGCCGACGAGGAACGTGCTGTCCCACCAC TACGTGCGCAGACACACGCCCAAGTTCTGGGAGACGGTCAACAGGTGTGT GCCTTTTGTTGCGCACGTCGATCGTGTGTGCGCTTTTACGGCGTTCAGGG CAATTTTTGTTCTTGCGGTGGACGTTCTTGCTTGCTCGATCTCTTGTATT TTGTCTGTGTATGCCTATCTGTCTGTCTGTCTGTCTGTCTGTCGATCTGT CCATCTATCTTGTCTGTCGGCTGGCTATTAACAACGCCTCCCTTCGTCCG TTTCTGGGCAGGCTGTTCAAGAAGCCGTCCATGCACAACGACCTCACTAG CATGATCATCAATCGGGTCAAGAACATCGCCGGGTACCCGGAGTCGAGCG CCGAGATCCTGCTCCGGCCGACGCTGTTGGATAACCTCGACCTGTACGGG GACGGTGACGTCCGACCGATGGAGGTATGTAGGCATTCACGAGTGGGCGT TGTTGTTGCTGTTGTTGTTCTTCTTCTCGTTTTGTCTTTGTTTTCGTTTT TGAATAGAGGTAGATGTTCATGAGTGGGTCCTGCTGCTGTTGATGTTTCG GCGTCTTCGTTTTGTGCGAATAACCCGCAATGACTCGCCTGCCCAGGTTT TTTACCTGAATATCGCGTGTTTTTAGAACTGGCGAGAAAACTGTCCTCCA TGATGGCATACGCACAAAAGTAGGGTACACCACGTCTGCGCATTTTTTCT TTTGCTTCCTCCGACCTTACCGTTCTTGCTGTTGGACACCTCCATGGTAA GAGACAGACATGACGGCGCTTAGGCGCACATGTGAGGGCTCGATCTGCTG CCTGCAGGCACCGGATTATTCTGGTTTGTCCTCCACTGCTGTCCCCTTTC GCTGTCATTTTCAGCCCCCCACCCGGCTCCATGACTGCTGTATAAACATG TCGAACCTGTCCCCCCCTCTGTGGGTCAACGTGTGGACTTAAACGCCTCC AACATGAAGAAGAAAAGCTCTTCTCGTTGCCTCAGAGGGATCAAAAGGAA ACACACTTGACGCTGCGCGCGCTGTTGAAGCATCACTTCAAACCACCACT AAGGGTTAAGCTCTCCATTTTCTCGGCGACGTCCGTCTGCGTTGAATTGT TAGGAATGGGACACGAAACAATTTCCTGTCCGTGGCCCCTCCTGTTCTAG ATGAGAGCACGCACCCCTCCCAACCTCACCCCACCCATTTACACGCCAGT CGCACCCAGCTTACCCTCTACATTATCTTGTTGTTGTCTCTATGCCCTGA CTCGCCACTCAGGAATACATGGAGAGGGTGGGGTTAGATATGACGACCAA GCGAGCGAAGCACATCTCTTGGTGTTTCAAGTGCCAGCCACCTTACCCGG TGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13906:710..4264-

>mRNA_Ecto-sp13_S_contig13906.3053.1 ID=mRNA_Ecto-sp13_S_contig13906.3053.1|Name=mRNA_Ecto-sp13_S_contig13906.3053.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=867bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13906:710..4264- (Ectocarpus species13 EcNAP12_S_4_19m)
GAATTCTGCTCTACGGAGCTGGGTTCGCAGTTTTGCCAATCGGGCAACGT
GCGAGATTTTTTCGTCCAGGAGGAGGAGGCGTTGGGGCCGGCGGTGGCGA
GATACATGGCGTCGAAGCTCTGGATGGGCGAGACTTACTTCATGCAGATC
GACGCGCACAGCCTGTTCGTGCCTCATTGGGACACGACGCTCGTAAACGA
TATCCACAACACCCCGTCGTATCCGATGTCGGTCCTGTCGCACTACCCCC
CGAGCGTCGGCGTGAACTTCGAAGACAAGCCGGGGTACCGAATATGCGGC
GCCGAGTTCGCAAAGAGCAGCGTCGAGTACGACATTATTCGGCTCACGGC
GGGTCTCCAGCAGGACAAGCATATACCGGTGAAACCCTGTCCCGCCCCTT
TCATCGGCGCGGGCTTCTTCTTCGCGCACTCGAGCTTCCTGGCCGACGTG
CCCTTCGACCCTTACGTGCCGTGGGTGTTCATGGGCGAGGAGATCCTGGA
GAGCCTCCGAATGTGGACGTGGGGCTACGACATCTACTCGCCGACGAGGA
ACGTGCTGTCCCACCACTACGTGCGCAGACACACGCCCAAGTTCTGGGAG
ACGGTCAACAGGCTGTTCAAGAAGCCGTCCATGCACAACGACCTCACTAG
CATGATCATCAATCGGGTCAAGAACATCGCCGGGTACCCGGAGTCGAGCG
CCGAGATCCTGCTCCGGCCGACGCTGTTGGATAACCTCGACCTGTACGGG
GACGGTGACGTCCGACCGATGGAGGAATACATGGAGAGGGTGGGGTTAGA
TATGACGACCAAGCGAGCGAAGCACATCTCTTGGTGTTTCAAGTGCCAGC
CACCTTACCCGGTGTGA
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