mRNA_Ecto-sp13_S_contig13904.3052.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13904.3052.1
Unique NamemRNA_Ecto-sp13_S_contig13904.3052.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: D7FJ85_ECTSI (Calnexin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ85_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 2.090e-113
Identity = 222/262 (84.73%), Postives = 234/262 (89.31%), Query Frame = 1
Query:   10 IPDPSAVKPDDW-----------------DEDAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPKFKAFEAVKAAEKQQKERERADKRREGGSSEAIASLNSKMTTTSRLLADKARPYVPAAAAPALDAAAENPVAVVGTIL 744
            I DP   +P+DW                 DEDAPKKIVDEDA+MPEGWLEEEE+I+XXXXXXXXXXXXXEEDGDWEPTMIINKACD+APGCGKWEKPLI NPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDAL LAE+TWRPKFKAFEAVKAAEK+QKERERADKRRE GS+EAIAS N+KM  TSRLLADKARPYVPAAAAPALDAAAENP+A+VGT L
Sbjct:  220 IDDPEDEQPEDWVTEAKIPXXXXXXXXXXDEDAPKKIVDEDADMPEGWLEEEEDIIXXXXXXXXXXXXXEEDGDWEPTMIINKACDEAPGCGKWEKPLIANPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALSLAEQTWRPKFKAFEAVKAAEKKQKERERADKRRERGSNEAIASWNAKMVATSRLLADKARPYVPAAAAPALDAAAENPIALVGTTL 481          
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: UPI001458AA1D (calnexin-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458AA1D)

HSP 1 Score: 108 bits (269), Expect = 3.160e-23
Identity = 101/185 (54.59%), Postives = 118/185 (63.78%), Query Frame = 1
Query:   10 IPDPSAVKPDDWDE-----------------DAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPK 513
            I DP+  KP DWDE                   P+KIVDEDA MP GWLEEE  +VXXXXXXXXXXXX + DGDWE  +I N  C+ APGCGKWEKP +    YK XXXXXXXXXXXXXXXXXXXXXXXX  F  E  EP  + PI  + +E+W+++  +  DNF+I  D   A + A ETW  K
Sbjct:  189 IDDPNDKKPSDWDEREKXXXXXXXXXXXXXXSEPEKIVDEDAVMPSGWLEEESXLVXXXXXXXXXXXXDDMDGDWEAALINNPKCENAPGCGKWEKPSVKXXKYKXXXXXXXXXXXXXXXXXXXXXXXXXXXF--EDLEPYKMTPIGAVGLELWSMNDDIVFDNFLITDDKSVAEQWAAETWEIK 371          
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: UPI001457F27D (calnexin-like isoform X1 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI001457F27D)

HSP 1 Score: 108 bits (269), Expect = 4.220e-23
Identity = 101/185 (54.59%), Postives = 118/185 (63.78%), Query Frame = 1
Query:   10 IPDPSAVKPDDWDE-----------------DAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPK 513
            I DP+  KP DWDE                   P+KIVDEDA MP GWLEEE  +VXXXXXXXXXXXX + DGDWE  +I N  C+ APGCGKWEKP +    YK XXXXXXXXXXXXXXXXXXXXXXXX  F  E  EP  + PI  + +E+W+++  +  DNF+I  D   A + A ETW  K
Sbjct:  266 IDDPNDKKPSDWDEREKXXXXXXXXXXXXXXSEPEKIVDEDAVMPSGWLEEESXLVXXXXXXXXXXXXDDMDGDWEAALINNPKCENAPGCGKWEKPSVKXXKYKXXXXXXXXXXXXXXXXXXXXXXXXXXXF--EDLEPYKMTPIGAVGLELWSMNDDIVFDNFLITDDKSVAEQWAAETWEIK 448          
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: A0A4P9ZWS5_9FUNG (Calreticulin family-domain-containing protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZWS5_9FUNG)

HSP 1 Score: 107 bits (266), Expect = 6.350e-23
Identity = 100/184 (54.35%), Postives = 118/184 (64.13%), Query Frame = 1
Query:    1 QAKIPDPSAVKPDDWDEDAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPS-HVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPKFKAFEAVKAAEK 549
            +++IPDP A KP DWDE+APK+                    XXXXXXXXXXXX +EDGD+EP MI N  C KA GCGKWE+P++ NPAYK XXXXXXXXXXXXXXXXXXXXXXXX YF  E  +P+  + PI G   E+WT+   +  DN  +G  V  A  LA E W PK +  EA  A EK
Sbjct:  226 ESQIPDPKATKPADWDENAPKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEDGDYEPRMIANPKCQKASGCGKWERPMMENPAYKXXXXXXXXXXXXXXXXXXXXXXXXXDYF--EDKQPAIGMTPIVGAGFELWTIQDQILFDNIYVGQSVDQAEALAAEAWVPKHEVEEAKLAKEK 407          
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: A0A310S5J8_9HYME (Calnexin n=3 Tax=Eufriesea mexicana TaxID=516756 RepID=A0A310S5J8_9HYME)

HSP 1 Score: 102 bits (255), Expect = 3.130e-21
Identity = 87/167 (52.10%), Postives = 111/167 (66.47%), Query Frame = 1
Query:    7 KIPDPSAVKPDDWDEDAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWR 507
            KIP+  AVKPDDWDEDAP +IVDED  MPEGWLE+E+ + XXXXXXXXXXXX E DG+WEP  I N  C  APGCG +++ +  NP YKG        XXXXXXXXXXXXXXXX  F+ E+  P  + PI  +  E+W++   +  DN +I      A +  ++T++
Sbjct:  273 KIPNLFAVKPDDWDEDAPAQIVDEDDIMPEGWLEDEQLMXXXXXXXXXXXXXVEMDGEWEPPEIPNPKCVDAPGCGPYKQKMKKNPRYKGKWSPPLINXXXXXXXXXXXXXXXXXXFNDEN--PFQMMPICAVGFELWSMSTDILFDNILITDSEEVAKKWTDDTFK 437          
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: UPI0005CEF9E0 (calnexin-like n=1 Tax=Ceratosolen solmsi marchali TaxID=326594 RepID=UPI0005CEF9E0)

HSP 1 Score: 102 bits (254), Expect = 4.780e-21
Identity = 95/182 (52.20%), Postives = 118/182 (64.84%), Query Frame = 1
Query:   10 IPDPSAVKPDDWDE-----------------DAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETW 504
            I DP+  +P+DWDE                 +AP KI+D++ EMPEGWLE E  ++XXXXXXXXXXXXX  DG+WEP  I N  C +APGCGK+EK LITNP YKG    XXXXXXXXXXXXXXXXXXXX  F+ ++  P  + PI  I  E+W++   +  DN +I  D   A + AEET+
Sbjct:  268 IEDPTDKRPEDWDEREKIPXXXXXXXXXXXEEAPAKIIDQNDEMPEGWLENEPAMIXXXXXXXXXXXXXXMDGEWEPPKIQNPKCAEAPGCGKYEKRLITNPQYKGKWLPXXXXXXXXXXXXXXXXXXXXXXFNDDN--PFKMTPIYAIGFELWSMSADILFDNIIITDDELVAKKWAEETF 447          
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: UPI0013F262AC (calnexin-like isoform X1 n=2 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F262AC)

HSP 1 Score: 101 bits (251), Expect = 1.020e-20
Identity = 86/166 (51.81%), Postives = 108/166 (65.06%), Query Frame = 1
Query:    7 KIPDPSAVKPDDWDEDAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETW 504
            KIPDP AVKPDDWDEDAP +IVDE   +PEGWLE+E    XXXXXXXXXXX    DG+WE   I N  C  APGCG +++ +  NP YKG        XXXXXXXXXXXXXXXX  F+ E   P  +  I+GI  E+W++   ++ DN +I  D   A + +++T+
Sbjct:  273 KIPDPLAVKPDDWDEDAPVQIVDETDIIPEGWLEDEPPTXXXXXXXXXXXXDDVMDGEWEAPEIPNPKCADAPGCGPYKQKMKKNPRYKGKWLAPLINXXXXXXXXXXXXXXXXXXFNDE--HPFEMLAISGIGFELWSMSPDIYFDNIIITDDEEVARKWSDDTF 436          
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: A0A1I7STR1_BURXY (Uncharacterized protein n=2 Tax=Bursaphelenchus xylophilus TaxID=6326 RepID=A0A1I7STR1_BURXY)

HSP 1 Score: 100 bits (248), Expect = 2.410e-20
Identity = 98/196 (50.00%), Postives = 120/196 (61.22%), Query Frame = 1
Query:   10 IPDPSAVKPDDWDED-----------------APKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPKFKAFEAVKAAE 546
            I DP   KP+DWDE                  APK+IVDE+A  P  WL++E+   XXXXXXXXXXXX E DG++EP ++ N  C+   GCGKWEKP+I NPAYKG XXXXXXXXXXXXXXXXXXXXXXX YF  E+     +  IT +  E+WT+D  +  DN +I  D   A   A  T+  K K  E ++  E
Sbjct:  248 IADPDDKKPEDWDEREFINXXXXXXXXXXXEAAPKEIVDENAVKPSDWLQDEQPXXXXXXXXXXXXXXDEMDGEYEPKLLANPKCEGVSGCGKWEKPIIPNPAYKGPXXXXXXXXXXXXXXXXXXXXXXXXYF--EANPYQQLKTITALGFELWTIDKNIIFDNILITSDEALAAEFAAATFEVKKKYEETLERFE 441          
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: F2CVU4_HORVV (Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2CVU4_HORVV)

HSP 1 Score: 99.0 bits (245), Expect = 6.380e-20
Identity = 91/171 (53.22%), Postives = 108/171 (63.16%), Query Frame = 1
Query:    1 QAKIPDPSAVKPDDWDEDAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPK 513
            +A+I D SA +PDDWDE AP                      XXXXXXXXXXX  EEDGDW P M+ N AC+   GCG WE P+I+NPAYKG XXXXXXXXXXXXXXXXXXXXXXX Y+  E   P+   P+ G+  E+WT+   +  DN  +GHD  DA  LA+ET+  K
Sbjct:  259 EAQIVDRSATRPDDWDETAPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEEDGDWIPDMVPNPACEAVSGCGTWEAPVISNPAYKGKXXXXXXXXXXXXXXXXXXXXXXXXYYLDE--HPADFTPLAGVGFELWTMTEDILFDNIFVGHDASDAKALAKETFHVK 427          
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: A0A3P9P2Y7_POERE (Calnexin n=19 Tax=Poeciliinae TaxID=586240 RepID=A0A3P9P2Y7_POERE)

HSP 1 Score: 98.2 bits (243), Expect = 1.300e-19
Identity = 92/184 (50.00%), Postives = 119/184 (64.67%), Query Frame = 1
Query:    4 AKIPDPSAVKPDDWDE-----------------DAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETW 504
            A+I DP   KP+DWDE                 DAP +   E A  P+GWL++E E  XXXXXXXXXXXXX  DG+WE   + N AC+ APGCG W++P+I NP+YKG XXXXXXXXXXXXXXXXXXXXXXX  F  E  +P  + PI+ + +E+W++   ++ D+F I +D   A R A ++W
Sbjct:  290 AEIEDPDDHKPEDWDERPKXXXXXXXXXXXXXXDAPAQXXXEVAVKPDGWLDDEAEXXXXXXXXXXXXXXXXMDGEWEAPQVPNPACESAPGCGPWKRPMIDNPSYKGKXXXXXXXXXXXXXXXXXXXXXXXXXF--EDLQPFKMTPISALGLELWSMTSDIFFDDFFITNDRNTAERWAADSW 471          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ85_ECTSI2.090e-11384.73Calnexin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ8... [more]
UPI001458AA1D3.160e-2354.59calnexin-like n=1 Tax=Pecten maximus TaxID=6579 Re... [more]
UPI001457F27D4.220e-2354.59calnexin-like isoform X1 n=2 Tax=Pecten maximus Ta... [more]
A0A4P9ZWS5_9FUNG6.350e-2354.35Calreticulin family-domain-containing protein (Fra... [more]
A0A310S5J8_9HYME3.130e-2152.10Calnexin n=3 Tax=Eufriesea mexicana TaxID=516756 R... [more]
UPI0005CEF9E04.780e-2152.20calnexin-like n=1 Tax=Ceratosolen solmsi marchali ... [more]
UPI0013F262AC1.020e-2051.81calnexin-like isoform X1 n=2 Tax=Odontomachus brun... [more]
A0A1I7STR1_BURXY2.410e-2050.00Uncharacterized protein n=2 Tax=Bursaphelenchus xy... [more]
F2CVU4_HORVV6.380e-2053.22Predicted protein n=1 Tax=Hordeum vulgare subsp. v... [more]
A0A3P9P2Y7_POERE1.300e-1950.00Calnexin n=19 Tax=Poeciliinae TaxID=586240 RepID=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13904contigEcto-sp13_S_contig13904:306..4117 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score351.3
Seed ortholog evalue3.9e-94
Seed eggNOG ortholog2880.D7FJ85
Model size774
KEGG koko:K08054,ko:K12852
KEGG Pathwayko03040,ko04141,ko04145,ko04612,ko04918,ko05166,map03040,map04141,map04145,map04612,map04918,map05166
KEGG ModuleM00354,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005783,GO:0005789,GO:0006457,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006886,GO:0006915,GO:0006950,GO:0007154,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010498,GO:0012501,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0019538,GO:0019941,GO:0030163,GO:0030176,GO:0030433,GO:0031224,GO:0031227,GO:0031667,GO:0031668,GO:0031669,GO:0031984,GO:0033036,GO:0033554,GO:0034605,GO:0034613,GO:0034976,GO:0036503,GO:0042175,GO:0042221,GO:0042594,GO:0042886,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046872,GO:0046907,GO:0050896,GO:0051082,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0070727,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1901698
Exons6
EggNOG free text desc.unfolded protein binding
EggNOG OGsKOG0675@1,KOG0675@2759
Cds size774
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041,ko03110,ko04091,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13904.3052.1prot_Ecto-sp13_S_contig13904.3052.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13904 306..4117 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462741.9879408-CDS-Ecto-sp13_S_contig13904:305..3831681462741.9879408-CDS-Ecto-sp13_S_contig13904:305..383Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13904 306..383 +
1681462742.0005212-CDS-Ecto-sp13_S_contig13904:894..10111681462742.0005212-CDS-Ecto-sp13_S_contig13904:894..1011Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13904 895..1011 +
1681462742.022555-CDS-Ecto-sp13_S_contig13904:1488..16351681462742.022555-CDS-Ecto-sp13_S_contig13904:1488..1635Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13904 1489..1635 +
1681462742.0329287-CDS-Ecto-sp13_S_contig13904:2200..22901681462742.0329287-CDS-Ecto-sp13_S_contig13904:2200..2290Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13904 2201..2290 +
1681462742.047742-CDS-Ecto-sp13_S_contig13904:3218..33761681462742.047742-CDS-Ecto-sp13_S_contig13904:3218..3376Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13904 3219..3376 +
1681462742.060521-CDS-Ecto-sp13_S_contig13904:3933..41171681462742.060521-CDS-Ecto-sp13_S_contig13904:3933..4117Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13904 3934..4117 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13904.3052.1

>prot_Ecto-sp13_S_contig13904.3052.1 ID=prot_Ecto-sp13_S_contig13904.3052.1|Name=mRNA_Ecto-sp13_S_contig13904.3052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp
QAKIPDPSAVKPDDWDEDAPKKIVDEDAEMPEGWLEEEEEIVPDPSSTRP
DDWDDEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGKWSAPKID
NPDYKGEWQPRKIPNPAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDN
FVIGHDVGDALRLAEETWRPKFKAFEAVKAAEKQQKERERADKRREGGSS
EAIASLNSKMTTTSRLLADKARPYVPAAAAPALDAAAENPVAVVGTILVR
PWPCSSR*
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mRNA from alignment at Ecto-sp13_S_contig13904:306..4117+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13904.3052.1 ID=mRNA_Ecto-sp13_S_contig13904.3052.1|Name=mRNA_Ecto-sp13_S_contig13904.3052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3812bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13904:306..4117+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCCAAGATCCCAGACCCCTCCGCGGTGAAGCCGGACGACTGGGACGA GGACGCTCCGAAAAAAATCGTCGATGAGGTAAGGCTACTACGTTCGTACT TCAGATAGAAACCCAAAGCTCTCCACGATACCTTCCACGAGGTGGCCCTG TACACTAACACCCCTGATTTAGTGACCCCTGCAGTGAAAGTGTCGCGACG GAAATTCGGCCGCTATTCAGGGCAGGTCGCTAAACCGAATGATCAATCAT TGCAGGGGTGCGGCGGTGCCACTTGATTTAGTGGCCGCTAACCAGGGCAT GCCGCTGAACAGGGGATCGCTAAACCGAAACCCTCACTATATCGTGAAGG AATGGACGGTTGCGGCTTTGGTGCATATGCGTTGATTGATTGTGAAGATT TTCGCAGCAGGAAGCATATGAATGCGACGGGGAGAAAAAGGTGGTGCCTT ATGAGTGGACGTGTATAAAACATGATCTGTAATTCTTTCGGGGTAGGTCC CCTCTACGATTACTGTTTCACCTTGAAAATAAAATGAAATGGGCGCCCGT GGTTTCGTTTTGCGTGGTTCGGCTTTGTTTGGTTCGCAGGACGCGGAGAT GCCCGAAGGCTGGCTCGAGGAGGAGGAGGAAATCGTCCCTGATCCTTCGT CGACCAGACCGGACGATTGGGACGACGAGGAAGACGGAGATTGGGAGCCG ACAATGGTGACGGTTTACTTTTTCGGCTGGCTTGCCCGCAACTGCATTGC TGAAAAATCAACAGTATCCATCCACCCTTGTACCGTTGCTTTTTTTTTTT TTTTTCGAAACCACGACCTCGTAAATGAGTGATAGTGACAGAGGGGTGGC GGCCTGAAAAAGGTTGGTACTCCTGGGTTTGGTACATTAGTTGCTGTGTT GTTGTTGCGGGTGGTGGGCTAGTGTTGTGTCTGGAGGTTGGGCTAGAACC CTCCTCGTCCAAAAGTCACATTTCTGAATGAGATCTGGCCGTGCTTCTGC TCTAGGGCTTGCGGTGTTGGATTCAGGTGGAGCGCGCTGATCCCCTGCTG CTGTTCGTTCGGCTGATTCCGCCGTCGCTGTGACCTTTTTGTCTTTATTG TGACTCCTTGCCAATTTTAACATGCGGCGATCTCGAACGTGTTCGCCGTG GCCCTCATTCCCTTTGTAAATGTGTGCGTGCAGATCATCAACAAAGCCTG CGACAAGGCCCCGGGTTGCGGCAAGTGGGAAAAGCCTCTGATTACAAACC CCGCGTACAAGGGGAAGTGGTCCGCTCCGAAGATCGACAACCCGGACTAC AAGGGGGAGTGGCAGCCGCGAAAGATCCCGGTAAGAATCATCATAAAAAA CCCGTACCGTTTCCACTCTCTGGTCGACTGGTCTCCGGATATCGTTCCAG TTTGCTTATAGTGATTTTGGCTTGCGTGGGACATCTGGACAGGGTGTTTT TTTTTTTTTTCACTGCCAGATGCCTTCGCGGCATGCCGAGTCAGGGTTTG CGTCGTTTTTTGTCCGTGAAAGCAGCAGCAGTGACTCATATCTGATCTTC TACTGTAAGATTGTTCCCCTCGTCAAAAACGTTGTTGTGGTTGTCGTTGG TGTCGACTCTGACCTTCTACTGTAACAGAGTTCCACTCGTGTTGCATGTT TTTGTTGTGGTTGTTGCTGGTGTCTGGGAGCTCTTGCTGTCATTTTGGTC ATCGTCATTACCATCGCCACCGCCTTCGGCATCTTTCCTAGTTCATTTTT CGCCTGCGTCTGTCTCGTACAGATGAGGAGTGCTATCGTCGGAATGTCGC CGACGATATTATTATTCCGACGATAAACGCACCCACAACGCCAGTGCCGA TCGACATACCTCCACCGCTCGATGCGTCGTGGTCTCATTCCGCAGAACCC GGCTTACTTCGACATCGAGAGCACGGAACCCTCCCACGTGGACCCTATCA CAGGGATCGCCGTGGAGATCTGGACGGTCGACGGGGTACGAAGTACTCGT TGTTGTCATTTTTTTTTCGTTGTTTCTATGCACATGAACGAATGTGTCTC TTGCGATGATGAATAACCCAGGATGATGTTGTCCCTCTTTGATGTACCAG GTTGCTTCTATACATCGGCTTTTGCACGCATCGTCATCCGAGTTGTGTTC CTTCTGTCACTTTTTTTTGTTGTTTTACGAGCAGAGATAGTCCCACCGGA GACGACGCCACAAACTGCCGAAGCCGGCATTGTGACTGAATGAATGAATC TTCAAACCCCCTCTTCATGGTGAATGAAAATATGTATTATTTCGAACCCT CTCTTCATGGTGAACGACAATATGCATCCCTCTCTTCATGGCGAACGGAA TATGTATCATTGCAAACCCTCTCTTCATTGTGACTGAATGGATATCTTTG TTTCAAATAACTCTAAAATGGTGCATGCATAGATAACCCCTTTTCAGGTA TTTGTATTTTGGATGAATGAATGGATACCTTTGGTTGGCGCGTCCCACTA GTCGCTTTATGGTCAATGAATGCGTGTTGATTGTGAATGAATGGGTACCC CGATTTCAAACTTGCGATGTGACGTTCTTTATGGTAAATGAAGTGATGTC CCCTTTTTAAACACCATTTCGGCGAATGGACACCGCCGGTTTGGTGAATG AATGAATGGCTTCGTTTCAAACGTATGTTCATGGTGAAGGTATGGATGTC GCCGTTTCAATTATCGCTCAATGGTGAATGGACATTTGTTTTCCGTTTCA AACGTCGTTTTACTAGGTGAGTGAATGGATACCGCCGTTTCAAACGTCAA AATGTCTCAACGCTAGGAATGAGAGGAAACTCCACTTTCATCCGTCGCTG TATCTGAGAAGTGAATGGACTTCCCCGTTTCAAACAAACGTCTCTGTTGT TTGGTTACTCTAGGGAGTGTGGTTGGACAACTTCGTTATCGGCCACGACG TCGGGGACGCCCTCCGTCTCGCCGAAGAGACCTGGCGTCCCAAGTTTAAG GCCTTCGAGGCCGTCAAGGCTGCCGAGAAGCAGCAGAAGGAGAGGGAGCG TGCCGACAAGAGGAGAGAGGGGTGTGTATACACGTTTGTCTTTCCAATAG CATCGACCGCGCTAGACGTATACGATCGAAAGACGCCAGGCATGTTGCGG AATGTTATTTAAGCAACAAGGCTTTCTTTCTGTCTTCACAGATTTGTAGT CGGCATCGACCGCGCCTGCTAGTCGGCTGTAAGAGAACGATGTCAGTGCC AACGGGTAGAACGTAAAACCGAGGAGGTCGAAAATTTGAAAAAGTGTGAC AACGCGCTGCATGCGCATGCAAAAACCAGTCATTTCGTGTTTGGTGCGTT CGTGTTCTACAAGTCGTTTCTTGCCATCTGTTCTATACACCTCTCGTCAA ACACTTGACGTATCAGCGAGGGCCAGTCACGCGGGACGGAAGACAAAACT CTCTTATTTTTTATCTGTACACAAGTCTTCCCCGAGAAAATTGAACTGGC TTTCTACGGCCGTAAGTTGTAGGAAACGTCTATCCAGTCACAGAAAGACT GCCCGTGATTTTGGTCTCGTCCCGCTGGGCCCGTCTCGTGACCGTGTGCC TGGCCTTGCAATGCTTTTTGTTTTTCAGAGGTTCTAGCGAGGCGATCGCG TCTTTGAACTCTAAGATGACGACGACGTCCAGGCTACTCGCCGACAAGGC TAGGCCGTACGTCCCCGCCGCCGCCGCCCCGGCCCTCGACGCCGCAGCGG AGAACCCCGTCGCCGTCGTCGGCACGATACTGGTAAGACCGTGGCCATGC AGCTCGCGATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13904:306..4117+

>mRNA_Ecto-sp13_S_contig13904.3052.1 ID=mRNA_Ecto-sp13_S_contig13904.3052.1|Name=mRNA_Ecto-sp13_S_contig13904.3052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=774bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13904:306..4117+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCCAAGATCCCAGACCCCTCCGCGGTGAAGCCGGACGACTGGGACGA
GGACGCTCCGAAAAAAATCGTCGATGAGGACGCGGAGATGCCCGAAGGCT
GGCTCGAGGAGGAGGAGGAAATCGTCCCTGATCCTTCGTCGACCAGACCG
GACGATTGGGACGACGAGGAAGACGGAGATTGGGAGCCGACAATGATCAT
CAACAAAGCCTGCGACAAGGCCCCGGGTTGCGGCAAGTGGGAAAAGCCTC
TGATTACAAACCCCGCGTACAAGGGGAAGTGGTCCGCTCCGAAGATCGAC
AACCCGGACTACAAGGGGGAGTGGCAGCCGCGAAAGATCCCGAACCCGGC
TTACTTCGACATCGAGAGCACGGAACCCTCCCACGTGGACCCTATCACAG
GGATCGCCGTGGAGATCTGGACGGTCGACGGGGGAGTGTGGTTGGACAAC
TTCGTTATCGGCCACGACGTCGGGGACGCCCTCCGTCTCGCCGAAGAGAC
CTGGCGTCCCAAGTTTAAGGCCTTCGAGGCCGTCAAGGCTGCCGAGAAGC
AGCAGAAGGAGAGGGAGCGTGCCGACAAGAGGAGAGAGGGAGGTTCTAGC
GAGGCGATCGCGTCTTTGAACTCTAAGATGACGACGACGTCCAGGCTACT
CGCCGACAAGGCTAGGCCGTACGTCCCCGCCGCCGCCGCCCCGGCCCTCG
ACGCCGCAGCGGAGAACCCCGTCGCCGTCGTCGGCACGATACTGGTAAGA
CCGTGGCCATGCAGCTCGCGATAG
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