mRNA_Ecto-sp13_S_contig13904.3052.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: D7FJ85_ECTSI (Calnexin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ85_ECTSI) HSP 1 Score: 347 bits (889), Expect = 2.090e-113 Identity = 222/262 (84.73%), Postives = 234/262 (89.31%), Query Frame = 1
Query: 10 IPDPSAVKPDDW-----------------DEDAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPKFKAFEAVKAAEKQQKERERADKRREGGSSEAIASLNSKMTTTSRLLADKARPYVPAAAAPALDAAAENPVAVVGTIL 744
I DP +P+DW DEDAPKKIVDEDA+MPEGWLEEEE+I+XXXXXXXXXXXXXEEDGDWEPTMIINKACD+APGCGKWEKPLI NPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDAL LAE+TWRPKFKAFEAVKAAEK+QKERERADKRRE GS+EAIAS N+KM TSRLLADKARPYVPAAAAPALDAAAENP+A+VGT L
Sbjct: 220 IDDPEDEQPEDWVTEAKIPXXXXXXXXXXDEDAPKKIVDEDADMPEGWLEEEEDIIXXXXXXXXXXXXXEEDGDWEPTMIINKACDEAPGCGKWEKPLIANPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALSLAEQTWRPKFKAFEAVKAAEKKQKERERADKRRERGSNEAIASWNAKMVATSRLLADKARPYVPAAAAPALDAAAENPIALVGTTL 481
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: UPI001458AA1D (calnexin-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458AA1D) HSP 1 Score: 108 bits (269), Expect = 3.160e-23 Identity = 101/185 (54.59%), Postives = 118/185 (63.78%), Query Frame = 1
Query: 10 IPDPSAVKPDDWDE-----------------DAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPK 513
I DP+ KP DWDE P+KIVDEDA MP GWLEEE +VXXXXXXXXXXXX + DGDWE +I N C+ APGCGKWEKP + YK XXXXXXXXXXXXXXXXXXXXXXXX F E EP + PI + +E+W+++ + DNF+I D A + A ETW K
Sbjct: 189 IDDPNDKKPSDWDEREKXXXXXXXXXXXXXXSEPEKIVDEDAVMPSGWLEEESXLVXXXXXXXXXXXXDDMDGDWEAALINNPKCENAPGCGKWEKPSVKXXKYKXXXXXXXXXXXXXXXXXXXXXXXXXXXF--EDLEPYKMTPIGAVGLELWSMNDDIVFDNFLITDDKSVAEQWAAETWEIK 371
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: UPI001457F27D (calnexin-like isoform X1 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI001457F27D) HSP 1 Score: 108 bits (269), Expect = 4.220e-23 Identity = 101/185 (54.59%), Postives = 118/185 (63.78%), Query Frame = 1
Query: 10 IPDPSAVKPDDWDE-----------------DAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPK 513
I DP+ KP DWDE P+KIVDEDA MP GWLEEE +VXXXXXXXXXXXX + DGDWE +I N C+ APGCGKWEKP + YK XXXXXXXXXXXXXXXXXXXXXXXX F E EP + PI + +E+W+++ + DNF+I D A + A ETW K
Sbjct: 266 IDDPNDKKPSDWDEREKXXXXXXXXXXXXXXSEPEKIVDEDAVMPSGWLEEESXLVXXXXXXXXXXXXDDMDGDWEAALINNPKCENAPGCGKWEKPSVKXXKYKXXXXXXXXXXXXXXXXXXXXXXXXXXXF--EDLEPYKMTPIGAVGLELWSMNDDIVFDNFLITDDKSVAEQWAAETWEIK 448
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: A0A4P9ZWS5_9FUNG (Calreticulin family-domain-containing protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZWS5_9FUNG) HSP 1 Score: 107 bits (266), Expect = 6.350e-23 Identity = 100/184 (54.35%), Postives = 118/184 (64.13%), Query Frame = 1
Query: 1 QAKIPDPSAVKPDDWDEDAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPS-HVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPKFKAFEAVKAAEK 549
+++IPDP A KP DWDE+APK+ XXXXXXXXXXXX +EDGD+EP MI N C KA GCGKWE+P++ NPAYK XXXXXXXXXXXXXXXXXXXXXXXX YF E +P+ + PI G E+WT+ + DN +G V A LA E W PK + EA A EK
Sbjct: 226 ESQIPDPKATKPADWDENAPKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEDGDYEPRMIANPKCQKASGCGKWERPMMENPAYKXXXXXXXXXXXXXXXXXXXXXXXXXDYF--EDKQPAIGMTPIVGAGFELWTIQDQILFDNIYVGQSVDQAEALAAEAWVPKHEVEEAKLAKEK 407
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: A0A310S5J8_9HYME (Calnexin n=3 Tax=Eufriesea mexicana TaxID=516756 RepID=A0A310S5J8_9HYME) HSP 1 Score: 102 bits (255), Expect = 3.130e-21 Identity = 87/167 (52.10%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 7 KIPDPSAVKPDDWDEDAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWR 507
KIP+ AVKPDDWDEDAP +IVDED MPEGWLE+E+ + XXXXXXXXXXXX E DG+WEP I N C APGCG +++ + NP YKG XXXXXXXXXXXXXXXX F+ E+ P + PI + E+W++ + DN +I A + ++T++
Sbjct: 273 KIPNLFAVKPDDWDEDAPAQIVDEDDIMPEGWLEDEQLMXXXXXXXXXXXXXVEMDGEWEPPEIPNPKCVDAPGCGPYKQKMKKNPRYKGKWSPPLINXXXXXXXXXXXXXXXXXXFNDEN--PFQMMPICAVGFELWSMSTDILFDNILITDSEEVAKKWTDDTFK 437
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: UPI0005CEF9E0 (calnexin-like n=1 Tax=Ceratosolen solmsi marchali TaxID=326594 RepID=UPI0005CEF9E0) HSP 1 Score: 102 bits (254), Expect = 4.780e-21 Identity = 95/182 (52.20%), Postives = 118/182 (64.84%), Query Frame = 1
Query: 10 IPDPSAVKPDDWDE-----------------DAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETW 504
I DP+ +P+DWDE +AP KI+D++ EMPEGWLE E ++XXXXXXXXXXXXX DG+WEP I N C +APGCGK+EK LITNP YKG XXXXXXXXXXXXXXXXXXXX F+ ++ P + PI I E+W++ + DN +I D A + AEET+
Sbjct: 268 IEDPTDKRPEDWDEREKIPXXXXXXXXXXXEEAPAKIIDQNDEMPEGWLENEPAMIXXXXXXXXXXXXXXMDGEWEPPKIQNPKCAEAPGCGKYEKRLITNPQYKGKWLPXXXXXXXXXXXXXXXXXXXXXXFNDDN--PFKMTPIYAIGFELWSMSADILFDNIIITDDELVAKKWAEETF 447
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: UPI0013F262AC (calnexin-like isoform X1 n=2 Tax=Odontomachus brunneus TaxID=486640 RepID=UPI0013F262AC) HSP 1 Score: 101 bits (251), Expect = 1.020e-20 Identity = 86/166 (51.81%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 7 KIPDPSAVKPDDWDEDAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETW 504
KIPDP AVKPDDWDEDAP +IVDE +PEGWLE+E XXXXXXXXXXX DG+WE I N C APGCG +++ + NP YKG XXXXXXXXXXXXXXXX F+ E P + I+GI E+W++ ++ DN +I D A + +++T+
Sbjct: 273 KIPDPLAVKPDDWDEDAPVQIVDETDIIPEGWLEDEPPTXXXXXXXXXXXXDDVMDGEWEAPEIPNPKCADAPGCGPYKQKMKKNPRYKGKWLAPLINXXXXXXXXXXXXXXXXXXFNDE--HPFEMLAISGIGFELWSMSPDIYFDNIIITDDEEVARKWSDDTF 436
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: A0A1I7STR1_BURXY (Uncharacterized protein n=2 Tax=Bursaphelenchus xylophilus TaxID=6326 RepID=A0A1I7STR1_BURXY) HSP 1 Score: 100 bits (248), Expect = 2.410e-20 Identity = 98/196 (50.00%), Postives = 120/196 (61.22%), Query Frame = 1
Query: 10 IPDPSAVKPDDWDED-----------------APKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPKFKAFEAVKAAE 546
I DP KP+DWDE APK+IVDE+A P WL++E+ XXXXXXXXXXXX E DG++EP ++ N C+ GCGKWEKP+I NPAYKG XXXXXXXXXXXXXXXXXXXXXXX YF E+ + IT + E+WT+D + DN +I D A A T+ K K E ++ E
Sbjct: 248 IADPDDKKPEDWDEREFINXXXXXXXXXXXEAAPKEIVDENAVKPSDWLQDEQPXXXXXXXXXXXXXXDEMDGEYEPKLLANPKCEGVSGCGKWEKPIIPNPAYKGPXXXXXXXXXXXXXXXXXXXXXXXXYF--EANPYQQLKTITALGFELWTIDKNIIFDNILITSDEALAAEFAAATFEVKKKYEETLERFE 441
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: F2CVU4_HORVV (Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2CVU4_HORVV) HSP 1 Score: 99.0 bits (245), Expect = 6.380e-20 Identity = 91/171 (53.22%), Postives = 108/171 (63.16%), Query Frame = 1
Query: 1 QAKIPDPSAVKPDDWDEDAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETWRPK 513
+A+I D SA +PDDWDE AP XXXXXXXXXXX EEDGDW P M+ N AC+ GCG WE P+I+NPAYKG XXXXXXXXXXXXXXXXXXXXXXX Y+ E P+ P+ G+ E+WT+ + DN +GHD DA LA+ET+ K
Sbjct: 259 EAQIVDRSATRPDDWDETAPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEEDGDWIPDMVPNPACEAVSGCGTWEAPVISNPAYKGKXXXXXXXXXXXXXXXXXXXXXXXXYYLDE--HPADFTPLAGVGFELWTMTEDILFDNIFVGHDASDAKALAKETFHVK 427
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Match: A0A3P9P2Y7_POERE (Calnexin n=19 Tax=Poeciliinae TaxID=586240 RepID=A0A3P9P2Y7_POERE) HSP 1 Score: 98.2 bits (243), Expect = 1.300e-19 Identity = 92/184 (50.00%), Postives = 119/184 (64.67%), Query Frame = 1
Query: 4 AKIPDPSAVKPDDWDE-----------------DAPKKIVDEDAEMPEGWLEEEEEIVXXXXXXXXXXXXXEEDGDWEPTMIINKACDKAPGCGKWEKPLITNPAYKGXXXXXXXXXXXXXXXXXXXXXXXXAYFDIESTEPSHVDPITGIAVEIWTVDGGVWLDNFVIGHDVGDALRLAEETW 504
A+I DP KP+DWDE DAP + E A P+GWL++E E XXXXXXXXXXXXX DG+WE + N AC+ APGCG W++P+I NP+YKG XXXXXXXXXXXXXXXXXXXXXXX F E +P + PI+ + +E+W++ ++ D+F I +D A R A ++W
Sbjct: 290 AEIEDPDDHKPEDWDERPKXXXXXXXXXXXXXXDAPAQXXXEVAVKPDGWLDDEAEXXXXXXXXXXXXXXXXMDGEWEAPQVPNPACESAPGCGPWKRPMIDNPSYKGKXXXXXXXXXXXXXXXXXXXXXXXXXF--EDLQPFKMTPISALGLELWSMTSDIFFDDFFITNDRNTAERWAADSW 471 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13904.3052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13904.3052.1 >prot_Ecto-sp13_S_contig13904.3052.1 ID=prot_Ecto-sp13_S_contig13904.3052.1|Name=mRNA_Ecto-sp13_S_contig13904.3052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp QAKIPDPSAVKPDDWDEDAPKKIVDEDAEMPEGWLEEEEEIVPDPSSTRPback to top mRNA from alignment at Ecto-sp13_S_contig13904:306..4117+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13904.3052.1 ID=mRNA_Ecto-sp13_S_contig13904.3052.1|Name=mRNA_Ecto-sp13_S_contig13904.3052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3812bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13904:306..4117+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13904:306..4117+ >mRNA_Ecto-sp13_S_contig13904.3052.1 ID=mRNA_Ecto-sp13_S_contig13904.3052.1|Name=mRNA_Ecto-sp13_S_contig13904.3052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=774bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13904:306..4117+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |