prot_Ecto-sp13_S_contig13903.3051.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13903.3051.1
Unique Nameprot_Ecto-sp13_S_contig13903.3051.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length233
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13903.3051.1 vs. uniprot
Match: D8LHE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE9_ECTSI)

HSP 1 Score: 415 bits (1067), Expect = 5.810e-146
Identity = 226/232 (97.41%), Postives = 226/232 (97.41%), Query Frame = 0 
Query:    1 MEVAVQVFGAAGLVETVVEVAYVVATLHRFTTFEEWYFLASVSFEVAGELLFLSAGICLLSRNSNRRTTARALTKDPVHHVAAVATDSDYMSWEFAALSLASTVVSLLPLLAWATFLPVWGEPFAEDDGDEGLRVALSAFSLTGVVAMLASAERARRSSPGSKRQRAMDTLVVVGVVSYATQKAFEVCVLASAWERLCTGVLGKALVVLLTVEIFSVAFAVVVIFSVVRRDF 232
            MEVAVQVFGAAGLVETVVEVAYVV TL RFTTFEEWYFLASVSFEVAGELLFL AGICLLSRNSNRRTTARALTKDPVHHVAAVATDSDYMSWEFAALSLASTVVSLLPLLAWATFLPVWGEPFAED GDEGLRVALSAFSLTGVVAMLAS ERARRSSPGSKRQRAMDTLVVVGVVSYATQKAFEVCVLASAWERLCTGVLGKALVVLLTVEI SVAFAVVVIFSVVRRDF
Sbjct:    1 MEVAVQVFGAAGLVETVVEVAYVVTTLRRFTTFEEWYFLASVSFEVAGELLFLFAGICLLSRNSNRRTTARALTKDPVHHVAAVATDSDYMSWEFAALSLASTVVSLLPLLAWATFLPVWGEPFAEDGGDEGLRVALSAFSLTGVVAMLASGERARRSSPGSKRQRAMDTLVVVGVVSYATQKAFEVCVLASAWERLCTGVLGKALVVLLTVEILSVAFAVVVIFSVVRRDF 232
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BLAST of mRNA_Ecto-sp13_S_contig13903.3051.1 vs. uniprot
Match: A0A6H5JPP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP1_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 4.670e-83
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0 
Query:   91 MSWEFAALSLASTVVSLLPLLAWATFLPVWGEPFAEDDGDEGLRVALSAFSLTGVVAMLASAERARRSSPGSKRQRAMDTLVVVGVVSYATQKAFEVCVLASAWERLCTGVLGKALVVLLTVEIFSVAFAVVVIFSVVRRD 231
            MSWEFAALSLASTVVSL+PLLAWATFLPVWGEPFAEDDGDE LRVALSAFSLTGVVAMLASAERARRSSPGSKRQRAMDTLVVVGVVSYATQKAFEVCVLASAWERLC+GVLGKALVVLLTVEI SVAFAVVVIFSVVR+D
Sbjct:    1 MSWEFAALSLASTVVSLVPLLAWATFLPVWGEPFAEDDGDEDLRVALSAFSLTGVVAMLASAERARRSSPGSKRQRAMDTLVVVGVVSYATQKAFEVCVLASAWERLCSGVLGKALVVLLTVEILSVAFAVVVIFSVVRQD 141
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13903.3051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHE9_ECTSI5.810e-14697.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPP1_9PHAE4.670e-8396.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 229..232
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 195..205
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 151..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..228
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..61
NoneNo IPR availableTMHMMTMhelixcoord: 206..228
NoneNo IPR availableTMHMMTMhelixcoord: 132..151
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 171..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13903contigEcto-sp13_S_contig13903:2855..4362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13903.3051.1mRNA_Ecto-sp13_S_contig13903.3051.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13903 2855..4362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13903.3051.1 ID=prot_Ecto-sp13_S_contig13903.3051.1|Name=mRNA_Ecto-sp13_S_contig13903.3051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MEVAVQVFGAAGLVETVVEVAYVVATLHRFTTFEEWYFLASVSFEVAGEL
LFLSAGICLLSRNSNRRTTARALTKDPVHHVAAVATDSDYMSWEFAALSL
ASTVVSLLPLLAWATFLPVWGEPFAEDDGDEGLRVALSAFSLTGVVAMLA
SAERARRSSPGSKRQRAMDTLVVVGVVSYATQKAFEVCVLASAWERLCTG
VLGKALVVLLTVEIFSVAFAVVVIFSVVRRDF*
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