mRNA_Ecto-sp13_S_contig1390.3046.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1390.3046.1
Unique NamemRNA_Ecto-sp13_S_contig1390.3046.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Match: D8LBG9_ECTSI (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBG9_ECTSI)

HSP 1 Score: 973 bits (2515), Expect = 0.000e+0
Identity = 503/543 (92.63%), Postives = 518/543 (95.40%), Query Frame = 1
Query:    1 MRWARNSARLGLRAVSYKSAAQGLQHSPPLSAGVSSRTAVKGAQRPRAIDVSAGLPLRVCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATALASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPSSLDELKTARPKNRIDALLTKVAGGSDSVSTEGKAVEFRFLVGLSDVLPNNSIPNSRVGAVRVERNQLELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQGVPYDERNSIIANERGRVQGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAEGRQGLRNILMGGQDGAPGLRGADGTKRKVQVVDWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSIAKAVGDEQ 1629
            MRW R+SARLGLRAVSYKSAAQGL+H+PPL   VS+RTA    QRP A DVSAG PLRVCVVGSGPAGFYVTKYLLK ++ELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGA+GDRELTVPGADLEGVFAARAFVSWYNGHPDFAH+SEEFA ALASSDTVAVVGVGNVALDCARILAKGANALK SDICDHAL+VLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTP+SLDELKTARPKNRIDALLTKVA GSDSVS E KAVEFRFLVGLSDVLPNNSIPN RVGAVRVERNQLELDEATG QRA+G GVKEVIECGMVLGSIGYRCLPV GVPYDERNSIIANERGRVQGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAE RQGLRN+LMGGQDGAPGLRG+ GTK+KVQVVDWDGYQRINRDEVARGAMKGKPREKFV VEEMLSIA AVGDE+
Sbjct:    1 MRWVRSSARLGLRAVSYKSAAQGLKHTPPLPTCVSARTAGTAIQRPTATDVSAGRPLRVCVVGSGPAGFYVTKYLLKEEAELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGAAGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHMSEEFAKALASSDTVAVVGVGNVALDCARILAKGANALKGSDICDHALDVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPASLDELKTARPKNRIDALLTKVADGSDSVSAEAKAVEFRFLVGLSDVLPNNSIPN-RVGAVRVERNQLELDEATGAQRAIGSGVKEVIECGMVLGSIGYRCLPVHGVPYDERNSIIANERGRVQGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAESRQGLRNMLMGGQDGAPGLRGSGGTKKKVQVVDWDGYQRINRDEVARGAMKGKPREKFVHVEEMLSIATAVGDEE 542          
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Match: A0A835ZC91_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC91_9STRA)

HSP 1 Score: 481 bits (1237), Expect = 4.570e-161
Identity = 278/508 (54.72%), Postives = 329/508 (64.76%), Query Frame = 1
Query:  166 PLRVCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATALASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLD-------GVACLVRQEELELSRT--PSSLDELKTARPKNRIDALLTKVAGGSDSVSTEGKAVEFRFLVGLSDVLPNNSIPNSRVGAVRVERNQL-ELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQGVPYDERNSIIANERG----RVQGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAEGRQGLRNILMGGQDGAPGLRGADGTKRKVQ---------VVDWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSIAKAVG 1620
            PLRVCVVGSGPAGFY TKYLLK +      + IDIVDRLPTPYGLVR GVAPDHPEVKA QNDF+QVASD RVSFFGNV  G DVS AQL ELY  VV+A+GA GDR L VPG DL+GV  ARAFV+WYNGHPD A L    A AL  SDT  V+GVGNVALDCARILAKGA+AL+ +DI  HALE LS+A    +R+V+ GRRG  QASFT+KELRELT+++       GVAC VR++EL LS    P   D     R K RI ALL  VA  S       + V+ RFL+    ++P+ + P +RVGA+ +ER  L   D+ +G  RA G GV E I+CG+VL SIGYR LP+  +PYD R + +A   G    RV+  PG YC+GWARRGPSGIIGTNI DA+   AA+ ED +S  L    +A     +R+                G   + Q         VVDW GYQRI+  E ARGA   KPREK V V EMLS+A+  G
Sbjct:   53 PLRVCVVGSGPAGFYTTKYLLKEQGLSDRGITIDIVDRLPTPYGLVRSGVAPDHPEVKAAQNDFEQVASDPRVSFFGNVTVGSDVSVAQLRELYHAVVIAHGAGGDRSLGVPGEDLDGVLTARAFVNWYNGHPDCADLGPRIAAALRHSDTAVVIGVGNVALDCARILAKGADALRSTDIAAHALEALSAAAP--KRIVVAGRRGAAQASFTIKELRELTRIELSLSAAQGVACAVREDELRLSDAAPPPPQD-----RAKQRIMALLGAVAEASKVPPPHSREVQLRFLLSPRRMVPSPADP-ARVGAIEMERTALVAADDGSGAVRAKGTGVTETIDCGLVLTSIGYRTLPLDDLPYDARRATVACAGGGASPRVENAPGTYCAGWARRGPSGIIGTNILDAKFAAAALAEDAASGALPGAAEARWVISVRSXXXXXXXXXXXXXXXXGRAVRTQALLSDSAVAVVDWTGYQRIDAAERARGAAASKPREKVVRVAEMLSLARGSG 552          
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Match: H3GA48_PHYRM (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GA48_PHYRM)

HSP 1 Score: 432 bits (1110), Expect = 1.060e-142
Identity = 246/492 (50.00%), Postives = 326/492 (66.26%), Query Frame = 1
Query:  172 RVCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATALASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPSSLDELKTARPKNRIDALLTKVAGGSDSVSTEGKAVEFRFLVGLSDVLPNNSIPNSRVGAVRVERNQLELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQ-GVPYDERNSIIANERGRV---------QGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAEGRQGLRNILMGGQDGAPGLRGADGTKRKVQVVDWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSIAKAV 1617
            RVCVVGSGPAGFY TKYLLK  S  G  V  D+++ LPTP+GLVR GVAPDHPEVK+V NDFD+VA+D R  F GNV  G+DV+ A+L + Y  VVLAYGA+GDREL V G  L GV +AR+FV+WYNGHP F  L  +    L  ++T  VVG GNVA+DCARIL+K A+ L  +DI  HA+E L ++G  +++V ++GRRG  QA+FTMKE+RELTKLDGVAC+V  E+L+ S TP+S  E+K  R + R+  LL K A          + V+ +FL   +++L +   P +RVGA+RVE+ +LE +     QRAVG G  E I C +VL SIGY+ LP++  VP+D+R  +++NE+GRV         Q V G+YC+GW +RGPSGIIGTNI DAR  V+ IVED ++      DK+ G        +GG +    L      ++  Q+V W  Y+R++ +E  RG + GKPREK   V EMLSIAK++
Sbjct:   30 RVCVVGSGPAGFYATKYLLKEHS--GARV--DMLEALPTPFGLVRSGVAPDHPEVKSVMNDFDKVAADERFRFLGNVRVGEDVTLAELQQHYHAVVLAYGAAGDRELGVQGEHLHGVMSARSFVNWYNGHPAFRDLQLD----LQHAETAVVVGQGNVAVDCARILSKNADELATTDIATHAVEALRNSG--VKKVFLVGRRGSAQAAFTMKEIRELTKLDGVACIVDPEDLKRSMTPNSEQEIKEQRARKRMSDLLGKAAERFAGTIDAERVVQIKFLSSPAEILADEKDP-TRVGAIRVEKTKLEGEP--NQQRAVGTGEFEDIPCNLVLRSIGYKSLPIEVNVPFDDRRHVVSNEQGRVVATSVSGEKQPVVGLYCTGWVKRGPSGIIGTNILDARETVSCIVEDFAAGNFLHSDKSYGED------LGGLETVEKLIKKRNPEK--QLVRWADYERLSAEESRRGELLGKPREKVTSVAEMLSIAKSM 500          
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Match: A0A421G4V8_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G4V8_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 6.150e-142
Identity = 240/497 (48.29%), Postives = 324/497 (65.19%), Query Frame = 1
Query:  169 LRVCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATALASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPSSLDELKTARPKNRIDALLTKVAGGSDSVSTEGKAVEFRFLVGLSDVLPNNSIPNSRVGAVRVERNQLELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQG-VPYDERNSIIANERGRV---------QGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAEGRQGLRNILMGGQDGAPGLRGADGTKRK----VQVVDWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSIAKAV 1617
            LRVCVVGSGP GFY TKYLLK  +     V +D+++ LPTP+GLVR GVAPDHPEVK+V NDF +VA+D R  F GNV  G+DV  A L + Y  VVLAYGA+GDREL VPG DL GV +AR FV+WYNGHP F  L  +    L   +T  V+G GNVA+DCARIL K  + L  +DI  H+++VL  +G  +++V+++GRRG  QA+FTMKE+RELTKLDGVAC+V  E+++ S+TPSS  E+K  R + R++ LL+K A   D+ S   + V+ +FL   +++L +     +RVGA+R+E+  LE +     QRAVG G  E I C +VL SIGY+ LP++   P+D+R  +++NE+GRV         + V G+YC+GWA+RGPSGIIGTNI DAR  V+ IVED +S +                L   ++   GL   +   +K     Q+V W  Y+R+N +E  RG + GKPREK   V EML++AK+V
Sbjct:   53 LRVCVVGSGPGGFYATKYLLKEHT----GVRVDMLEALPTPFGLVRSGVAPDHPEVKSVMNDFAKVAADERFRFLGNVRVGEDVRLADLQQHYHAVVLAYGAAGDRELGVPGEDLRGVMSARTFVNWYNGHPAFRDLDLD----LQDVETAVVIGQGNVAVDCARILTKNVDELASTDIATHSVKVLRRSG--VKKVLLVGRRGSAQAAFTMKEIRELTKLDGVACIVDPEDMKRSKTPSSELEIKEQRARKRMNDLLSKAAEQFDTTSDAERVVQIKFLSSPAEILADEK-DATRVGAIRIEKTSLEGEP--NQQRAVGTGEFEDIPCSLVLRSIGYKSLPIEADAPFDQRRHVVSNEQGRVVATSESGETEPVVGLYCTGWAKRGPSGIIGTNIVDARETVSCIVEDFASGK---------------FLHTNEENLAGLEAVEKLIKKRNPDKQLVRWTDYERLNSEENRRGELVGKPREKITSVAEMLAVAKSV 521          
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Match: A0A662XRD0_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRD0_9STRA)

HSP 1 Score: 429 bits (1102), Expect = 2.600e-141
Identity = 238/491 (48.47%), Postives = 325/491 (66.19%), Query Frame = 1
Query:  172 RVCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATALASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPSSLDELKTARPKNRIDALLTKVAGGSDS-VSTEGKAVEFRFLVGLSDVLPNNSIPNSRVGAVRVERNQLELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQG-VPYDERNSIIANERGRV----------QGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAEGRQGLRNILMGGQDGAPGL-RGADGTKRKVQVVDWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSI 1605
            RVCVVGSGPAGFY TKYLLK  +     V +D+++ LPTP+GLVR GVAPDHPEVK+V NDF++VA+D R  F GNV  G+DV  A+LSE Y  VVLAYGA+ DREL VPG DL GV +AR FV+WYNGHP F  L  +    L  + T  ++G GNVA+DCAR+L K  + L  +D+  HA+EVL   G+G+++V+++GRRG  QA+FTMKE+RELTKLDGVAC+V  ++L+ S TPSS  E+K  RP+ R++ LL+K      S  S + + V+ +FL    +++P+ + P +RVG +R+E+ +LE +     QRAVG G  E I C +VL SIGY+ LP++   P+D R  ++ANE+GRV          Q V G YC+GW +RGPSGI+GTNI DAR  V+ I+ D +  +    ++ + +       +GG +    L +  D TK   Q+V WD YQR++ +E  RG + GKPREK   V EML++
Sbjct:   40 RVCVVGSGPAGFYATKYLLKEHA----GVRVDMLEALPTPFGLVRSGVAPDHPEVKSVMNDFEKVAADERFRFLGNVRVGEDVRLAELSEHYHAVVLAYGAAADRELGVPGEDLHGVLSARTFVNWYNGHPAFRDLEID----LQKAKTAVIIGQGNVAVDCARVLTKSVDDLATTDMSTHAVEVLR--GSGIKKVLLVGRRGSAQAAFTMKEIRELTKLDGVACVVDPDDLKRSMTPSSEQEIKEQRPRKRMNELLSKATEQFGSPASDDTRVVQIKFLSSPVEIVPDPNDP-TRVGGIRLEKTRLEGE--ANQQRAVGTGEFEEIPCNLVLRSIGYKSLPIEADTPFDPRRHVVANEQGRVVATSSNDDELQPVVGFYCTGWVKRGPSGIVGTNIVDARETVSCILGDFAEGKFLHSEEGDDKD------LGGLEAVEKLIKDRDPTK---QLVTWDDYQRLSTEESRRGELLGKPREKITSVPEMLAV 508          
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Match: A0A6A4A882_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A882_9STRA)

HSP 1 Score: 428 bits (1101), Expect = 2.740e-141
Identity = 245/505 (48.51%), Postives = 329/505 (65.15%), Query Frame = 1
Query:  139 RAIDVSAGLPLR-VCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATALASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPSSLDELKTARPKNRIDALLTKVAGGSDSVSTEGKAVEFRFLVGLSDVLPNNSIPNSRVGAVRVERNQLELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQ-GVPYDERNSIIANERGRV---------QGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAEGRQGLRNILMGGQDGAPGL---RGADGTKRKVQVVDWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSIAK 1611
            R+   S  +P R VCVVGSGP+GFY +KYLLK  S  G  V  D+++ LPTP+GLVR GVAPDHPEVK+V NDF++VA+D+R  F GNV  G+DV+  +L   Y  VVLAYG +GDREL VPG  L GV +A +FV+WYNGHP F  L  +    L  +DT  V+G GNVA+DCARIL K  + L  +DI  HA+EVL ++G  +++V ++GRRG  QA+FTMKE+RELTKL+GVAC+V  E+++ S TP+S  E+K  R + R++ LL K A   +SV    + V+ +FL   +++L + + P +RVGA+RVE+ +LE +     QRAVG G  E I C +VL SIGY+ LP++ GVP+D R  +++NE+GRV         Q V G+YC+GW +RGPSGIIGTNI DAR  V +IVED ++      D   G        +GG +    L   R  D      Q+V W  Y+R+N +E  RG + GKPREK   V EML++AK
Sbjct:   21 RSFSTSPDMPQRRVCVVGSGPSGFYASKYLLKEHS--GARV--DMLEALPTPFGLVRSGVAPDHPEVKSVMNDFNKVAADSRFRFLGNVRVGEDVTLTELQRHYHAVVLAYGTAGDRELGVPGEQLRGVMSASSFVNWYNGHPAFRDLELD----LQHADTAVVIGQGNVAVDCARILTKDVDELVTTDITAHAVEVLRNSG--VKKVFLVGRRGSAQAAFTMKEIRELTKLNGVACIVDPEDMKRSLTPASEQEIKEQRARKRMNDLLAKAAEQFESVDDAKRVVQIKFLSSPAEILADENDP-TRVGAIRVEKTKLEGEP--NQQRAVGTGEFEDIPCNLVLRSIGYKSLPIEAGVPFDSRRHVVSNEQGRVVKTSDSGEKQPVVGLYCTGWVKRGPSGIIGTNIVDARETVGSIVEDFAAGNFLHSDAGAGED------LGGLEAVEKLIKKRNPD-----KQLVRWADYERLNAEENRRGELVGKPREKVTSVAEMLAVAK 501          
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Match: A0A225WQD2_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WQD2_9STRA)

HSP 1 Score: 428 bits (1100), Expect = 4.270e-141
Identity = 244/515 (47.38%), Postives = 326/515 (63.30%), Query Frame = 1
Query:  124 GAQRPRAIDVSAGLPLR-VCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATALASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPSSLDELKTARPKNRIDALLTKVAGGSDSVSTEGKAVEFRFLVGLSDVLPNNSIPNSRVGAVRVERNQLELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQG-VPYDERNSIIANERGRV---------QGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAEGRQGLRNILMGGQDGAPGLRGADGTKRKV-------QVVDWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSIAKA 1614
            GA   R+   ++  PLR VCVVGSGPAGFY +KYLLK  +  G  V  D+++ LPTP+GLVR GVAPDHPEVK+V NDFD+VA+D R  F GNV  G DV+ A+L + Y  VVLAYGA+GDR L VPG DL GV +A  FV+WYNGHP F     + A  L  ++T  V+G GNVA+DCAR+L K  + L  +DI  HA+EVL S+G  +R+V ++GRRG  QA+FTMKE+RELTKLDGV C+V  E+LE S+  +S  E+K  RP+ R++ LL K A    S     + V+ +FL    +++ +   P ++VGA+R+E+ +LE +     QRAVG G  E I C +VL SIGY+ LP++  VP+D R  +I+N++GRV         + V G+YC+GW +RGPSGIIGTNI DAR  V+ IVED ++                N L         L G +  ++ +       Q+V W  Y+R+N +E  RGA+ GKPREK   V EML IAK+
Sbjct:   19 GASLVRSFSAASNSPLRRVCVVGSGPAGFYASKYLLKEHA--GARV--DMLEALPTPFGLVRSGVAPDHPEVKSVMNDFDKVAADERFRFLGNVRVGDDVTLAELQQHYHAVVLAYGAAGDRTLGVPGEDLRGVLSACTFVNWYNGHPAF----RDLALDLKQTETAVVIGQGNVAVDCARVLTKNVDELATTDIATHAVEVLRSSG--VRKVFVVGRRGSAQAAFTMKEIRELTKLDGVVCVVDPEDLERSKNSASEQEIKEQRPRKRMNDLLVKAADQFSSAGDAKRVVQIKFLSSPVEIIADQKDP-TQVGAIRIEKTKLEGE--ANRQRAVGTGEFEDIPCNLVLRSIGYKSLPIEADVPFDTRRHVISNDQGRVVTTSSSGEKESVVGLYCTGWVKRGPSGIIGTNIVDARETVSCIVEDFAAG---------------NYLHHESSADEDLGGLEAVEKLIKKRNPDKQLVRWADYERLNAEENRRGALVGKPREKVTSVTEMLEIAKS 505          
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Match: M4BMB9_HYAAE (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMB9_HYAAE)

HSP 1 Score: 422 bits (1084), Expect = 1.370e-138
Identity = 235/504 (46.63%), Postives = 328/504 (65.08%), Query Frame = 1
Query:  145 IDVSAGLPLR-VCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATALASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPSSLDELKTARPKNRIDALLTKVAGGSDSVSTEGKAVEFRFLVGLSDVLPNNSIPNSRVGAVRVERNQLELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQ-GVPYDERNSIIANERGRV---------QGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAEGRQGLRNILMGGQDGAPGLRGADGTKRKV---QVVDWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSIAKA 1614
            + VS+  PLR VCVVGSGPAGFYVTKYLLK        V +++++ LPTP+GLVR GVAPDHPEVK+V NDF+ VA D R  F GNVC GKDV+ A+L   Y  V+LAYGA+ DREL +PG  L+GV +ARAFV+WYNGHP F  L+ +    L  ++T  ++G GNVA+DCAR+L K  + L  +DI  HA++VL ++   +++V ++GRRG  QA+FTMKE+RELTKLDGVAC+V  ++L+ S TP+S  E++  R + R++ LL++ A   +      + V+ +FL   ++++ + + P +RVGA+R+E+ +LE       QRAVG GV E I C +VL SIGY+ LP++ G+P+D R  +I+NERGRV         + + G+YC+GW +RGP+GIIG+NI DAR  V  I+ED ++      D   G        +G  +    L      K++    Q+V W  Y RI+ +E  RG   GKPREK   V EML+IAK+
Sbjct:   26 LHVSSDAPLRRVCVVGSGPAGFYVTKYLLKQHR----GVRVNMLEALPTPFGLVRSGVAPDHPEVKSVMNDFELVAGDDRFGFLGNVCVGKDVTLAELQRYYHAVILAYGAAEDRELGIPGEQLKGVLSARAFVNWYNGHPAFRGLTPD----LKRTETAVIIGQGNVAVDCARLLTKNVDELARTDIAAHAVQVLRNSS--IQKVFVVGRRGSAQAAFTMKEIRELTKLDGVACVVDPDDLKRSFTPASEQEIQDQRARKRMEELLSRAAEQFECTQNAKRVVQLKFLSSPAEIIADENDP-TRVGAIRLEKTKLE--GKPNRQRAVGTGVYEDIPCSLVLRSIGYKSLPIEAGIPFDTRRHVISNERGRVVSTLSSGEKKSMVGLYCTGWVKRGPAGIIGSNIVDARETVGCIMEDFAAGNFLHSDGNAGND------LGEVEAVEML-----VKKRYPDKQLVKWADYVRISAEETLRGQAVGKPREKITSVTEMLAIAKS 505          
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Match: K3X4B6_GLOUD (NADPH:adrenodoxin oxidoreductase, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4B6_GLOUD)

HSP 1 Score: 421 bits (1082), Expect = 2.250e-138
Identity = 228/486 (46.91%), Postives = 313/486 (64.40%), Query Frame = 1
Query:  169 LRVCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATALASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPSSLDELKTARPKNRIDALLTKVAGGSDSVSTEGKAVEFRFLVGLSDVLPNNSIPNSRVGAVRVERNQLELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQGVPYDERNSIIANERGRV-------QGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSSKQLALGDKAEGRQGLRNILMGGQDGAPGLRGADGTKRKVQVVDWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSI 1605
            LRVC+VGSGPAGFY  KYLLK        V +D+++ LPTPYGLVR GVAPDHPEVK+V NDF++VA++AR  F GNV  G D+S ++L + Y  VVLAYGA+GDREL +PG  L GV +ARAFV+WYNGHP F  L  +      S  T  + G GNVA+DCARIL K  + L  +DI  HA++VL ++   +++V ++GRRG  QA+FTMKE+RELTKL  V+C+V   +++ S   SS  E+   R K R++ LLTKV+      STE + V+ +FL    ++L +   P  +VG VRVE+ +L+ +     Q AVG G  E I   +VL SIGY+  P++  P+D + +++AN++GR+       + V G+YCSGW +RGPSGIIGTNI DAR  V +IVED++S ++     + G + ++ I++G              K + Q+V W  Y+R+N +E  RG   GKPREKF  VEEML I
Sbjct:   46 LRVCIVGSGPAGFYAAKYLLKEHD----GVRVDMIEALPTPYGLVRSGVAPDHPEVKSVMNDFEKVAAEARFDFLGNVRVGDDISLSELKQHYHAVVLAYGAAGDRELGIPGEHLAGVLSARAFVNWYNGHPKFRDLPVDL-----SGKTAVIFGQGNVAVDCARILTKSVDELATTDISQHAVDVLRNSN--IKKVYLIGRRGSAQAAFTMKEIRELTKLTNVSCVVDPADMKASLNESSQQEINEQRAKKRMNELLTKVSSEFGKESTEARQVQIKFLSAPVELLADPENPE-KVGNVRVEKTKLQGEP--NRQHAVGTGEFETIPASLVLRSIGYKSQPLEDAPFDTKRNVLANDQGRLIDVKGNGEQVVGLYCSGWVKRGPSGIIGTNIIDARETVTSIVEDIASGKILKPASSNGLETIKQIILG-------------KKPEKQLVSWKDYERLNDEETKRGEAVGKPREKFTSVEEMLRI 504          
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Match: A0A2P4Y0T8_9STRA (NADPH:adrenodoxin oxidoreductase, mitochondrial n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0T8_9STRA)

HSP 1 Score: 418 bits (1075), Expect = 2.460e-137
Identity = 240/513 (46.78%), Postives = 326/513 (63.55%), Query Frame = 1
Query:  124 GAQRPRAIDVSAGLPLR-VCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGLVRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYDVVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATALASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGLRRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPSSLDELKTARPKNRIDALLTKVAGGSDSVSTEGKAVEFRFLVGLSDVLPNNSIPNSRVGAVRVERNQLELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQG-VPYDERNSIIANERGRV---------QGVPGMYCSGWARRGPSGIIGTNITDARSVVAAIVEDVSS-----KQLALGDKAEGRQGLRNILMGGQDGAPGLRGADGTKRKVQVVDWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSIAKA 1614
            G +  R+   ++  PLR VCVVGSGPAGFY TKYLLK  +  G  V  D+++ LPTP+GLVR GVAPDHPEVK+V NDFD+VA+D R  F GNV  G+DVS A+L + Y  VVLAYGA+GDR+L VPG +L GV +AR FV+WYNGHP F  L  +    L  ++T  V+G GNVA+DCARIL K  + L  +DI  HA+EVL  +G  +++V ++GRRG  QA+FTMKE+RELTKLDGV C+V  ++LE S+TP+S  E+K  R + R++ LL K A    S     + V+ +FL    +++ +    ++RVG +RVE+ +LE +     QRAVG G  E I C +VL SIGY+ LP++   P+D    +++N+ GRV         Q V G+YC+GW +RGPSGIIGTNI DAR  V  IVED ++      + +  +  +G + +  ++          R  D      Q+V W  Y+R+N +E  RG + GKPREK   V EML IAK+
Sbjct:   19 GVRLARSFSSASESPLRRVCVVGSGPAGFYATKYLLKEHA--GARV--DMLEALPTPFGLVRSGVAPDHPEVKSVMNDFDKVAADERFRFLGNVRVGEDVSLAELQQHYHAVVLAYGAAGDRKLGVPGEELRGVLSARTFVNWYNGHPAFRDLELD----LKQAETAVVIGQGNVAVDCARILTKNVDELATTDIASHAVEVLRKSG--IKKVFLVGRRGSAQAAFTMKEIRELTKLDGVVCVVDPDDLERSKTPASEQEIKEQRARKRMNDLLIKAADQFASAGDTKRVVQIKFLSSPVEIIADVK-DSTRVGGIRVEKTKLEGEP--NQQRAVGTGEFEDIPCNLVLRSIGYKSLPIEANAPFDNCRHVVSNDHGRVVTTLSSGEKQTVVGLYCTGWVKRGPSGIIGTNIVDARETVNCIVEDFAAGNYLHSESSTDEDLDGLKAVEKLIK--------KRNPD-----KQLVRWADYERLNAEENRRGELVGKPREKVTSVTEMLEIAKS 505          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1390.3046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBG9_ECTSI0.000e+092.63NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A835ZC91_9STRA4.570e-16154.72NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
H3GA48_PHYRM1.060e-14250.00NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A421G4V8_9STRA6.150e-14248.29NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A662XRD0_9STRA2.600e-14148.47NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A6A4A882_9STRA2.740e-14148.51NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A225WQD2_9STRA4.270e-14147.38NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
M4BMB9_HYAAE1.370e-13846.63NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
K3X4B6_GLOUD2.250e-13846.91NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]
A0A2P4Y0T8_9STRA2.460e-13746.78NADPH:adrenodoxin oxidoreductase, mitochondrial n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1390contigEcto-sp13_S_contig1390:3478..8642 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score981.5
Seed ortholog evalue1.6e-283
Seed eggNOG ortholog2880.D8LBG9
Preferred nameARH1
Model size1792
KEGG koko:K18914
Hectar predicted targeting categorymitochondrion
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004324,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005886,GO:0006091,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006790,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008860,GO:0009058,GO:0009108,GO:0009987,GO:0015039,GO:0015980,GO:0016020,GO:0016043,GO:0016226,GO:0016491,GO:0016730,GO:0016731,GO:0019725,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030003,GO:0031090,GO:0031163,GO:0031966,GO:0031967,GO:0031975,GO:0036094,GO:0042180,GO:0042181,GO:0042592,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044571,GO:0045333,GO:0046916,GO:0048037,GO:0048878,GO:0050660,GO:0050662,GO:0050801,GO:0051186,GO:0051188,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0071944,GO:0071949,GO:0097159,GO:0098771,GO:1901265,GO:1901363,GO:1901576,GO:1901661,GO:1901663
Exons10
EggNOG free text desc.NADPH-adrenodoxin reductase activity
EggNOG OGsCOG0493@1,KOG1800@2759
Ec32 ortholog descriptionPyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
Ec32 orthologEc-27_004010.1
EC1.18.1.6
Cds size1632
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1390.3046.1prot_Ecto-sp13_S_contig1390.3046.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1390 3478..8482 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462741.4610162-CDS-Ecto-sp13_S_contig1390:3477..37121681462741.4610162-CDS-Ecto-sp13_S_contig1390:3477..3712Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1390 3478..3712 +
1681462741.4709737-CDS-Ecto-sp13_S_contig1390:4347..44751681462741.4709737-CDS-Ecto-sp13_S_contig1390:4347..4475Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1390 4348..4475 +
1681462741.4789336-CDS-Ecto-sp13_S_contig1390:4750..49351681462741.4789336-CDS-Ecto-sp13_S_contig1390:4750..4935Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1390 4751..4935 +
1681462741.4867222-CDS-Ecto-sp13_S_contig1390:5451..55791681462741.4867222-CDS-Ecto-sp13_S_contig1390:5451..5579Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1390 5452..5579 +
1681462741.499734-CDS-Ecto-sp13_S_contig1390:5861..59921681462741.499734-CDS-Ecto-sp13_S_contig1390:5861..5992Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1390 5862..5992 +
1681462741.5075958-CDS-Ecto-sp13_S_contig1390:6241..63821681462741.5075958-CDS-Ecto-sp13_S_contig1390:6241..6382Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1390 6242..6382 +
1681462741.5151439-CDS-Ecto-sp13_S_contig1390:6878..69821681462741.5151439-CDS-Ecto-sp13_S_contig1390:6878..6982Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1390 6879..6982 +
1681462741.5228715-CDS-Ecto-sp13_S_contig1390:7362..75541681462741.5228715-CDS-Ecto-sp13_S_contig1390:7362..7554Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1390 7363..7554 +
1681462741.5306656-CDS-Ecto-sp13_S_contig1390:7697..78231681462741.5306656-CDS-Ecto-sp13_S_contig1390:7697..7823Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1390 7698..7823 +
1681462741.539942-CDS-Ecto-sp13_S_contig1390:8220..84821681462741.539942-CDS-Ecto-sp13_S_contig1390:8220..8482Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1390 8221..8482 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462741.5500455-UTR-Ecto-sp13_S_contig1390:8482..86421681462741.5500455-UTR-Ecto-sp13_S_contig1390:8482..8642Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1390 8483..8642 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1390.3046.1

>prot_Ecto-sp13_S_contig1390.3046.1 ID=prot_Ecto-sp13_S_contig1390.3046.1|Name=mRNA_Ecto-sp13_S_contig1390.3046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=544bp
MRWARNSARLGLRAVSYKSAAQGLQHSPPLSAGVSSRTAVKGAQRPRAID
VSAGLPLRVCVVGSGPAGFYVTKYLLKAKSELGCEVVIDIVDRLPTPYGL
VRFGVAPDHPEVKAVQNDFDQVASDARVSFFGNVCFGKDVSAAQLSELYD
VVVLAYGASGDRELTVPGADLEGVFAARAFVSWYNGHPDFAHLSEEFATA
LASSDTVAVVGVGNVALDCARILAKGANALKDSDICDHALEVLSSAGAGL
RRVVILGRRGHVQASFTMKELRELTKLDGVACLVRQEELELSRTPSSLDE
LKTARPKNRIDALLTKVAGGSDSVSTEGKAVEFRFLVGLSDVLPNNSIPN
SRVGAVRVERNQLELDEATGTQRAVGLGVKEVIECGMVLGSIGYRCLPVQ
GVPYDERNSIIANERGRVQGVPGMYCSGWARRGPSGIIGTNITDARSVVA
AIVEDVSSKQLALGDKAEGRQGLRNILMGGQDGAPGLRGADGTKRKVQVV
DWDGYQRINRDEVARGAMKGKPREKFVDVEEMLSIAKAVGDEQ*
back to top

mRNA from alignment at Ecto-sp13_S_contig1390:3478..8642+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1390.3046.1 ID=mRNA_Ecto-sp13_S_contig1390.3046.1|Name=mRNA_Ecto-sp13_S_contig1390.3046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1390:3478..8642+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGATGGGCTCGAAACTCTGCGCGGTTGGGCCTGCGCGCTGTATCATA CAAAAGTGCAGCGCAAGGTCTGCAGCACAGCCCCCCCCTATCTGCCGGCG TGTCATCAAGGACAGCAGTAAAAGGAGCACAGCGACCAAGGGCAATCGAT GTCTCTGCTGGGCTCCCTCTTCGTGTGTGTGTGGTCGGCTCTGGTCCTGC TGGGTTTTACGTCACCAAGTACTTGCTCAAGGCGAGTGTGCGACACGATA CCGATCGCTCCTATGCAACATGGCCACAATAGAGAGTAGCATAGATTGGC GATGGCAGCTCAGGTTGTGGCCCTCTCTTGATGGGTAATAATGTGCATGA AATCGAGCGCACTGCTCTGCTGCCACCTCGGTGTTCTGTTCCTACGAGTT CTCTCAGACACAGGAACAGCAAAGTGCACCCAGCAATGTTAGACTAGATG GCTGGCGGAATGAGCGTTAAAGGGCGATATGAGGTCAGGCAGAACCCGAG TCGTAGTCGCGGCTATTGTAGAAACGCTCCTCTAATTGTATGTTTCCTCT GTTCATTGTGGGTCAAGTCTTAGCCTCTCCGTTTATGTTTGCGCACCAGC TGGGTCACGCACAGGAGGAATTCTCGAAATCTCCACCTTTTCTCCTGCGA TAGTTGCCTTCAACTTGAAAGGTGAGAAGGATCCAGTAGTCCCTTCCCTC GCGACTTTGCGCCTTTACTCCGAATTGGAAGTATTTTTTTCCGGATATTC GAAGTCGCAACGTATGTATGATGTGCCTACAGCAGGAACAGGACCACCGG GGTGCGCATCAGCTTTGTTGCGATTGTACCCTCATGATGCATGTGCGTGT ATTTTTGTGCCAATAGGAAGAGTCGGAGCTGGGGTGCGAAGTCGTCATTG ACATAGTCGACCGGCTGCCCACTCCGTACGGCTTGGTGAGGTTTGGGGTA GCCCCTGATCACCCGGAGGTAAAGGCGGTTCAAAACGACTTCGACCAGGT AAGTGCCAAGAGCCTGCAAATTTCGCGAGCTTGAGCAGAGGATGTATTGG TTTCGGACGGCAGTGTGGGCACAGTATGTACGTACCGTACGAGCACCGGG TAGCAGCGCAGCTTTCACCCATTCGCTTGGCGCTTGGCTCTCGACGCGTA TCAACTGTGGGGCGTACCTGCAATGCCGACACAACAGACAAGGAGTTGCT GATTTGCACCTAATGAAGGGAGACCAACTCTCGTTTGTGCCCGACGCTTC AACTGCCGTCATTTTGCCTGCAGGTTGCCTCAGATGCCAGGGTCAGTTTT TTCGGCAACGTGTGCTTCGGGAAGGATGTGTCAGCTGCACAACTGTCGGA GCTGTACGACGTAGTTGTGTTGGCTTACGGGGCTTCAGGAGACAGGGAGC TAACCGTCCCGGGGGCTGATCTCGAGGGGGTGTTTGCCGCACGTGCTTTC GTGTCGTGGTAAGTACAGCACCCGCGAACGTCCAGGATTGCTCGCCGTTG TTTCATCCAAGCTAACAGGGTAGGTACCGCCGCCATCGACCTACCGTTGA GGATACTGGGGCCAGCAGCTTTCATTTCAACAAATTTCAAAACGTTGGGT TTGCGACCCGATTGCGGCCGAAGTGGATGCTCGCTACGGTGTATCATACC CATCCAAGAGGGCCTGACGAAACCAGCACTGAAATTTCGAGATTATCAGA TCGCGATCCTGACACGGGCGTCCACTGGAAGTCTTTGTTGGTGTTGAAGA GTTGTTGAGCGAACACGACGCTGCCCGCATTTACTGTATGCATAGTCTTG TTCGCCCGTGCAGGTGATGTGCGACGACGACGGGATTGATTCCCTCTTTT AGACAACCCCGTTCTCCTCATGGACTTGATGGCACACAAACTGTGTGGCG GGTAGATGCCCTTGTCTTGTGACCACCGGCTTGACGTGATTAGTATGGAC GACGACGTATTTATACCATGACAGGTACAACGGACACCCTGACTTTGCCC ATTTGTCGGAGGAGTTTGCGACAGCCTTGGCGTCATCCGACACGGTGGCG GTGGTTGGTGTCGGCAACGTAGCGCTAGACTGTGCGCGGATTCTTGCAAA GGGTAAGAAAGATTTCACGATGCGGATATTGAAGATTTTCTACAGGTTGA TCTCTTTCGCGCGGTGGTGCACCGACCGAGAGATTGTGCATGCGCCGAGG AAATCACTCTTGCCTGGTTTGAAGTCAATCCTTGCGTCGAGAGGTTTCAA GGTCAAACCATGCACCAATCTCCTCGGGTTCAACCACAGTTCGCGGTTCA CGAATGTGTGGGCCTCACCAGTATCACCCTTTCCACTGGCACTGGCGTTC CGGTTCAATCCGTTTGTGGTATGCATATCAACAGGAGCGAACGCTCTGAA AGATTCGGACATTTGTGATCACGCTCTGGAAGTTTTGTCCTCCGCCGGTG CTGGCCTCCGACGAGTGGTGATCCTCGGACGTCGGGGGCATGTACAGGCG TCCTTCACGATGAAGGTGTGTCGTCGAGATTAAGGTGCTACATTGCGCAA CATAGGTTTCACTCAGACAACTTCCTCAAAAACGTGTGAAAATATTACTG CTCCGCTGATGGCCGTACTTGGTAGCCTTTTGCCTTAACAATATGAAAAG CTTTCAAGGTGATTTGTGTCCTGTATTGACGTTTACATTGATCGTGATGT GAACCACGTTTGTTTGTCAGCGGTGCATGCGATGACGCTTCCTGTGTTGT TTCGCCCCTTCCAGGAGCTTCGTGAGCTTACGAAGCTAGACGGAGTAGCC TGTCTAGTGAGGCAAGAGGAGCTCGAGCTGAGCCGAACTCCATCAAGCCT AGACGAGCTCAAGACAGCACGGCCAAAGAATAGGATAGATGCGTTGCTGA CGAAGGTGCGGAAACAGCGATGCATCCACGTAGCACCAGTTTGCTAGCAC GTGGGGGTATACCTGTGCTCTGTCGGTTGGTTTTGACCCTCGCCAATCGG GGCCTAATCTCCCTGTTGGTTTACGCTGGCCGTTCGCATCGGTGTCAACT TGTTAGCAAGAATGCATACCTGCGAAAGTGCTGTTAGGGCACCAACCTAG GGTTTGAAGTCATCTATGTCATTTCTCAGAAAATAACGTCTTATCAGGTC GGACACCCCCGGCGTTCGACGGAAAACATTCCTGGGATACGTGGTACACG GCACTCTTACAACACCTCGTTTCGCGCGATGTCTTCTTAGAGGACGAAAA GTAGGAAAATGTGTTGAAGTTAACCCGGGCTTCCCTCCTCCGTGACTACC GAAACTATGAGTCCAATATGAGAAACCTCTCCCAACAACCTGCCGTTCAT CGTTTCATGATTTAGTAACGTGCTTCCACCACACGCTATATATAAACTAA GGTGGCGGGTGGATCTGACAGCGTGTCGACAGAGGGAAAGGCCGTCGAAT TTCGCTTCCTGGTTGGACTCTCGGACGTCCTTCCGAACAACAGCATTCCC AACAGGTGTGGGAAAACTAGGAATTATAGGCACGTGGACTCGCAGAAGCG CTTCTCAAAAGTTTGATTTGCGAGAGCTAGTGGGCCTATTTGCACAGCGG CGCTTCCGCAGGGTGATGATGCGATTCGTGTGTTAAGCACGTCTTGTTCT CACTACAGGAATTTCGTCGTTGCGGGTGACCTTATTGGTTGCTGTTAGAT CCTTGTTCTATCTCGGGTTTCGTGCGATTTGTACACCTTTGTTGTGTTGT TCCAGCATTGAAATGGTCTGCTTGACAGAATCTCGTCCCGAGTTTCCGTC GTGTATTGTTAAACAACGGCGTGTTTAGTACAGCAGTTCCTCACGGCCTT GATCGCTCGATGGATGGCGACATTTCGTTCCCAAGCAGGGTTGGCGCAGT CCGCGTTGAACGGAATCAGTTAGAGCTCGACGAAGCCACGGGCACACAAC GGGCCGTTGGCTTGGGCGTAAAAGAGGTCATTGAGTGCGGGATGGTGCTC GGTTCTATCGGCTACCGCTGTCTTCCTGTTCAGGGTGTGCCGTACGACGA ACGGAATTCGATCATCGCGAACGAACGGTGAGCCAGCTTGTTTTGGCGGG ATGAATAACCGAATGGAGTTGTATTTATAATCCCCGCCGCATACGTACGC CATCACCGAGTTGCAATCCCCAGCACGTTTTGTATCAACTCTAACGCTTG GTCGTCGTCATTACGTGTAGGGGAAGAGTGCAGGGGGTACCTGGCATGTA CTGCAGCGGCTGGGCTCGGCGTGGACCAAGTGGAATCATCGGCACCAATA TAACCGATGCTAGATCTGTGGTGGCTGCCATCGTCGAGGACGTCAGGTCA GAAACACGGGGCAATTTCTGGCCTTTCGTTGTGTACTGTATAGTCGAAAA TTTCGGACGTCGCGCTGGGTATTCTCCATTCTTCTCGCTCTACTCTTTTG TAAGCTTAAGTTGTGTTGCAAACGAAAAGATGCCACGTGTGCCATGCATG GACGGTTTCAACGGTCCTGGTGGCGATTGGCAAGGCACTTCGAGATCACC CCCCGGTGTAAACTGCTGATTGCAGCCCTTTTGACAACCCTTCTCTCGTA GTTCGACACAGACGTAGTTGAAGCAGGTGCCTCTGCGAATATGAAAATGA AGCATTACGTTTTAATGCTGCCGCTATGATATTTGTCATCCCTTACGATG CGTTTTCGCTCTCCACGTATGACCTGCCTATCTCCACTCGCAGCAGCAAG CAGCTGGCGTTGGGTGATAAAGCCGAAGGCCGACAGGGTCTCAGAAATAT TTTGATGGGGGGGCAAGATGGTGCACCTGGGCTTCGCGGAGCGGATGGGA CCAAGCGAAAGGTCCAGGTAGTGGATTGGGACGGCTACCAGAGAATAAAT CGGGATGAGGTAGCACGAGGAGCGATGAAGGGCAAACCGAGAGAAAAGTT CGTGGACGTTGAAGAAATGTTGAGCATCGCCAAAGCTGTTGGTGATGAGC AGTAACGTACAGGCCGTCGTGTCCTCTCCCCTGTAGTCTAGGAGCTTTTT CATGTTATCTTGAATTGCTTTTTCTTTCCGTGCCCCACCGAGGCACGCGG CAAGGGATGCCGTTTCTGGCTGGAAAATAGGTTGTCAGTGTCTCACGTCT AAGTTTGGTTCTAAC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1390:3478..8642+

>mRNA_Ecto-sp13_S_contig1390.3046.1 ID=mRNA_Ecto-sp13_S_contig1390.3046.1|Name=mRNA_Ecto-sp13_S_contig1390.3046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1632bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1390:3478..8642+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGATGGGCTCGAAACTCTGCGCGGTTGGGCCTGCGCGCTGTATCATA
CAAAAGTGCAGCGCAAGGTCTGCAGCACAGCCCCCCCCTATCTGCCGGCG
TGTCATCAAGGACAGCAGTAAAAGGAGCACAGCGACCAAGGGCAATCGAT
GTCTCTGCTGGGCTCCCTCTTCGTGTGTGTGTGGTCGGCTCTGGTCCTGC
TGGGTTTTACGTCACCAAGTACTTGCTCAAGGCGAAGTCGGAGCTGGGGT
GCGAAGTCGTCATTGACATAGTCGACCGGCTGCCCACTCCGTACGGCTTG
GTGAGGTTTGGGGTAGCCCCTGATCACCCGGAGGTAAAGGCGGTTCAAAA
CGACTTCGACCAGGTTGCCTCAGATGCCAGGGTCAGTTTTTTCGGCAACG
TGTGCTTCGGGAAGGATGTGTCAGCTGCACAACTGTCGGAGCTGTACGAC
GTAGTTGTGTTGGCTTACGGGGCTTCAGGAGACAGGGAGCTAACCGTCCC
GGGGGCTGATCTCGAGGGGGTGTTTGCCGCACGTGCTTTCGTGTCGTGGT
ACAACGGACACCCTGACTTTGCCCATTTGTCGGAGGAGTTTGCGACAGCC
TTGGCGTCATCCGACACGGTGGCGGTGGTTGGTGTCGGCAACGTAGCGCT
AGACTGTGCGCGGATTCTTGCAAAGGGAGCGAACGCTCTGAAAGATTCGG
ACATTTGTGATCACGCTCTGGAAGTTTTGTCCTCCGCCGGTGCTGGCCTC
CGACGAGTGGTGATCCTCGGACGTCGGGGGCATGTACAGGCGTCCTTCAC
GATGAAGGAGCTTCGTGAGCTTACGAAGCTAGACGGAGTAGCCTGTCTAG
TGAGGCAAGAGGAGCTCGAGCTGAGCCGAACTCCATCAAGCCTAGACGAG
CTCAAGACAGCACGGCCAAAGAATAGGATAGATGCGTTGCTGACGAAGGT
GGCGGGTGGATCTGACAGCGTGTCGACAGAGGGAAAGGCCGTCGAATTTC
GCTTCCTGGTTGGACTCTCGGACGTCCTTCCGAACAACAGCATTCCCAAC
AGCAGGGTTGGCGCAGTCCGCGTTGAACGGAATCAGTTAGAGCTCGACGA
AGCCACGGGCACACAACGGGCCGTTGGCTTGGGCGTAAAAGAGGTCATTG
AGTGCGGGATGGTGCTCGGTTCTATCGGCTACCGCTGTCTTCCTGTTCAG
GGTGTGCCGTACGACGAACGGAATTCGATCATCGCGAACGAACGGGGAAG
AGTGCAGGGGGTACCTGGCATGTACTGCAGCGGCTGGGCTCGGCGTGGAC
CAAGTGGAATCATCGGCACCAATATAACCGATGCTAGATCTGTGGTGGCT
GCCATCGTCGAGGACGTCAGCAGCAAGCAGCTGGCGTTGGGTGATAAAGC
CGAAGGCCGACAGGGTCTCAGAAATATTTTGATGGGGGGGCAAGATGGTG
CACCTGGGCTTCGCGGAGCGGATGGGACCAAGCGAAAGGTCCAGGTAGTG
GATTGGGACGGCTACCAGAGAATAAATCGGGATGAGGTAGCACGAGGAGC
GATGAAGGGCAAACCGAGAGAAAAGTTCGTGGACGTTGAAGAAATGTTGA
GCATCGCCAAAGCTGTTGGTGATGAGCAGTAA
back to top