mRNA_Ecto-sp13_S_contig13899.3044.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13899.3044.1
Unique NamemRNA_Ecto-sp13_S_contig13899.3044.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Match: A0A6H5KTA9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTA9_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 4.720e-119
Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 1 
Query:    1 SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGR 555
            SANQA+CNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGL  VLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGST+ENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGR
Sbjct:  142 SANQAMCNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLASVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTDENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGR 326
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BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Match: A0A7S2UU92_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU92_9STRA)

HSP 1 Score: 288 bits (737), Expect = 1.120e-93
Identity = 147/185 (79.46%), Postives = 159/185 (85.95%), Query Frame = 1 
Query:    1 SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGR 555
            SAN A C GAEKILAG A +V+AGGVETFSDLPIR S+PIR RLL LGKA KKG  G LGLLKGLKLKD+APETPAIANYTTGEVMG SSDRL+  FGISR++QD FALRSHQ AA+AHA GIY+ EI+ VDGSTEENG+K +STLE LG LKPAFVKPHGTHTAANSSFLSDGASA LI SE R
Sbjct:  104 SANLAFCTGAEKILAGKAGLVMAGGVETFSDLPIRLSKPIRQRLLGLGKAMKKGPMGALGLLKGLKLKDLAPETPAIANYTTGEVMGKSSDRLAAEFGISREDQDRFALRSHQRAAEAHASGIYEAEIVAVDGSTEENGIKADSTLEGLGKLKPAFVKPHGTHTAANSSFLSDGASAGLIGSEAR 288
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BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Match: A0A835ZCM0_9STRA (Acetyl-CoA acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCM0_9STRA)

HSP 1 Score: 286 bits (731), Expect = 1.240e-92
Identity = 144/185 (77.84%), Postives = 160/185 (86.49%), Query Frame = 1 
Query:    1 SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGR 555
            SANQA+C G EKILAG A+VV+AGG ETFSDLPIRFSR IR RL+   KA KKG  G+LGLLKGL  KD+APETPAIANYTTGEVMGHSSDRL+GRFGISR+EQD FA RSH NAA+AH DG+Y +EIIP +G+TEENG+K +ST EKL  LKPAFVKPHGTHTAANSSFLSDGASAALIMSE +
Sbjct:  116 SANQAMCGGVEKILAGRAEVVVAGGCETFSDLPIRFSRGIRQRLIAFPKASKKGPMGILGLLKGLGTKDLAPETPAIANYTTGEVMGHSSDRLAGRFGISREEQDAFAARSHVNAARAHKDGLYKEEIIPFNGTTEENGIKADSTPEKLAKLKPAFVKPHGTHTAANSSFLSDGASAALIMSEAK 300
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BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Match: A0A7S3M7M8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7M8_9STRA)

HSP 1 Score: 273 bits (698), Expect = 3.680e-88
Identity = 130/183 (71.04%), Postives = 158/183 (86.34%), Query Frame = 1 
Query:    1 SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSE 549
            S+N AI +GAEKIL+G AD+++AGG ETFSD+PIRFS+PIR RLL + KA KKG+PG LGLLKGLKL D+APE PAIAN+TTGEVMGHSSDRL+ +FG+SR++QDEF +RSH NAA AHA G+Y  EIIPVDG+  ENG+KG+++ EK+  L PAF+KPHGTHTAANSSFL+DGA+A LIMSE
Sbjct:   75 SSNLAITSGAEKILSGQADIIVAGGAETFSDVPIRFSKPIRKRLLGVAKASKKGIPGYLGLLKGLKLGDLAPEAPAIANFTTGEVMGHSSDRLAAKFGVSRKDQDEFTVRSHLNAAAAHAKGLYKNEIIPVDGNVTENGIKGDTSYEKVAKLNPAFIKPHGTHTAANSSFLTDGATATLIMSE 257
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BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Match: A0A7S0AX79_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AX79_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.730e-85
Identity = 135/187 (72.19%), Postives = 161/187 (86.10%), Query Frame = 1 
Query:    1 SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKG-LPGVLG-LLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGR 555
            S++ AIC+GAEKI++G ADVVLAGGVETFSDLPIR +RP+R +LL + KA KKG + G +G +LKGLK+KD+A ETPAIANYTTGEVMG SSD+LS +FG+SRQEQDEF +RSH  A+KAH DG Y  E+IP  GSTEENG+K +ST+EK+G LKPAFVKPHGTHTAANSSFL+DGASA+LIMSE R
Sbjct:  144 SSSSAICSGAEKIISGHADVVLAGGVETFSDLPIRLTRPVRQKLLTMSKAMKKGGVSGAIGHMLKGLKMKDLALETPAIANYTTGEVMGVSSDKLSAKFGVSRQEQDEFTVRSHTLASKAHTDGWYKSEVIPYKGSTEENGIKADSTVEKVGKLKPAFVKPHGTHTAANSSFLTDGASASLIMSEAR 330
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BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Match: A0A2R5G3A9_9STRA (Acetyl-CoA acetyltransferase, mitochondrial n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3A9_9STRA)

HSP 1 Score: 266 bits (681), Expect = 3.310e-85
Identity = 130/183 (71.04%), Postives = 154/183 (84.15%), Query Frame = 1 
Query:    1 SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSE 549
            S+NQA+C GAEKILAG ADVVLAGG ETFSD+PIRFS+P+R RL+N  KA KKG  G+L LLKGLKL D+APE PAI N++TGEVMGHSSDRL+ RF +SRQ+QDEFALRSHQNAAKAH  G Y  E++ V GSTEEN ++G++T+E+L  LKPAFVKPHGTHTA NSS L+DGASA +IM +
Sbjct:  110 SSNQAVCTGAEKILAGQADVVLAGGSETFSDVPIRFSKPVRERLINANKAMKKGPAGILKLLKGLKLSDLAPEPPAIKNFSTGEVMGHSSDRLASRFAVSRQDQDEFALRSHQNAAKAHEAGYYKNEVLNVGGSTEENCIRGDTTMERLQKLKPAFVKPHGTHTAGNSSPLTDGASACIIMGD 292
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BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Match: A0A7S2AT36_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AT36_9STRA)

HSP 1 Score: 265 bits (678), Expect = 8.620e-85
Identity = 133/183 (72.68%), Postives = 154/183 (84.15%), Query Frame = 1 
Query:    1 SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSE 549
            SANQAI  GAEKIL+G AD+V+AGG ETFSD+PIR+S+ IR RL+   KA KKG P ++ L+ GL LKD APE PAIANYTTGEVMGHSSDRLS RFGISRQ+QDEF LRSHQNAAKAHADG+Y +EI PV G T EN +KG++ +EK+ SL+PAFVKPHGTHTAANSS L+DGAS+ LIMSE
Sbjct:  106 SANQAITTGAEKILSGQADIVVAGGCETFSDVPIRYSKNIRQRLIQAPKAMKKGAPAIMKLMNGLTLKDFAPEAPAIANYTTGEVMGHSSDRLSSRFGISRQDQDEFCLRSHQNAAKAHADGLYKEEITPVYG-TSENVIKGDANIEKISSLRPAFVKPHGTHTAANSSALTDGASSVLIMSE 287
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BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Match: A0A7S1TQ53_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQ53_9STRA)

HSP 1 Score: 265 bits (676), Expect = 1.680e-84
Identity = 136/185 (73.51%), Postives = 158/185 (85.41%), Query Frame = 1 
Query:    1 SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPG--VLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSE 549
            SAN AIC GAEKILAG ADVV+AGGVETFSD+PIRFS+P+R +L+   K  KKG PG  +  LLKGLK   + P+ PAIANYTTGEVMGHSSDRL+ RFG+SR++QD FALRSH NAAKAHA G+Y++EI+ VDGS EENG+KG+S+ EKL SL+PAFVKPHGTHTAANSSFL+DGASAALIMSE
Sbjct:  102 SANAAICQGAEKILAGQADVVVAGGVETFSDVPIRFSKPLRQKLIRGQKVFKKG-PGAAIPYLLKGLKPAHLVPDAPAIANYTTGEVMGHSSDRLAQRFGVSREDQDAFALRSHVNAAKAHAAGLYEEEIVAVDGSKEENGIKGDSSAEKLASLRPAFVKPHGTHTAANSSFLTDGASAALIMSE 285
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BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Match: A0A7S2W305_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W305_9STRA)

HSP 1 Score: 259 bits (662), Expect = 1.540e-82
Identity = 126/183 (68.85%), Postives = 153/183 (83.61%), Query Frame = 1 
Query:    1 SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSE 549
            SANQAI  GAEKIL+G AD+VLAGG ETFSD+PIRFS+PIR+RLL  GKA KKG  G L LLKGL LKD+APE PAI+NYTTGEVMGHS+DRL+ RFG+SR++QD +A+RSH NAA+AH  G+Y  E+IPVDG   EN +KG++++EK+  LKPAF+KPHGT TA ++S L+DGASA LIMSE
Sbjct:   92 SANQAITTGAEKILSGQADIVLAGGCETFSDVPIRFSKPIRSRLLQAGKAMKKGPMGALSLLKGLTLKDLAPEAPAISNYTTGEVMGHSADRLAARFGVSREDQDLYAIRSHHNAARAHEQGLYKDEVIPVDGEIFENNIKGDTSIEKMAKLKPAFIKPHGTITAGSASPLTDGASAVLIMSE 274
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BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Match: W4GP07_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP07_9STRA)

HSP 1 Score: 258 bits (658), Expect = 8.160e-82
Identity = 127/185 (68.65%), Postives = 154/185 (83.24%), Query Frame = 1 
Query:    1 SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKAQKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGISRQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLGSLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGR 555
            S++QAI  GAEKILAG AD+VLAGGVETFSD+PIRFSRPIR RL+N  KA K G  G+L LL GLKL D+APE PAI N+ T EVMG+SSDRLS RFG++R+E DEF+++SH+NAAKAHA+G YD EIIP  G+T ENG+  +S  EK+ SLKPAF+KPHGTHTAANSSFL+DG++A L+MSE +
Sbjct:  100 SSSQAIATGAEKILAGNADIVLAGGVETFSDVPIRFSRPIRKRLINSAKALKAGPLGILKLLSGLKLSDLAPEAPAIKNFHTNEVMGNSSDRLSARFGVTRKEMDEFSIKSHKNAAKAHAEGKYDGEIIPYKGTTLENGINPDSNYEKVSSLKPAFIKPHGTHTAANSSFLTDGSAATLLMSESK 284
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13899.3044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTA9_9PHAE4.720e-11997.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UU92_9STRA1.120e-9379.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZCM0_9STRA1.240e-9277.84Acetyl-CoA acetyltransferase n=1 Tax=Tribonema min... [more]
A0A7S3M7M8_9STRA3.680e-8871.04Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0AX79_9STRA1.730e-8572.19Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A2R5G3A9_9STRA3.310e-8571.04Acetyl-CoA acetyltransferase, mitochondrial n=1 Ta... [more]
A0A7S2AT36_9STRA8.620e-8572.68Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1TQ53_9STRA1.680e-8473.51Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2W305_9STRA1.540e-8268.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W4GP07_9STRA8.160e-8268.65Uncharacterized protein n=8 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13899contigEcto-sp13_S_contig13899:256..4099 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score360.1
Seed ortholog evalue6e-97
Seed eggNOG ortholog2880.D7G3H4
Preferred nameHADHB
Model size555
KEGG rclassRC00004,RC00326,RC00405,RC01702
KEGG koko:K07509
KEGG ReactionR00391,R00927,R01177,R03778,R03858,R03991,R04546,R04742,R04747
KEGG Pathwayko00062,ko00071,ko00280,ko01100,ko01110,ko01130,ko01212,map00062,map00071,map00280,map01100,map01110,map01130,map01212
KEGG ModuleM00085,M00087
Hectar predicted targeting categoryother localisation
GOsGO:0000062,GO:0000166,GO:0003674,GO:0003824,GO:0003857,GO:0003988,GO:0004300,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005759,GO:0005783,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009062,GO:0009295,GO:0009987,GO:0010259,GO:0012505,GO:0016020,GO:0016042,GO:0016054,GO:0016408,GO:0016491,GO:0016507,GO:0016508,GO:0016509,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0016829,GO:0016835,GO:0016836,GO:0017076,GO:0019395,GO:0019752,GO:0019866,GO:0019867,GO:0030258,GO:0030554,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0034440,GO:0036094,GO:0036125,GO:0042645,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0046395,GO:0048037,GO:0048856,GO:0050662,GO:0051287,GO:0055114,GO:0070013,GO:0071704,GO:0072329,GO:0097159,GO:0097367,GO:0098588,GO:0098798,GO:0098805,GO:1901265,GO:1901363,GO:1901567,GO:1901575,GO:1901681
Exons5
EggNOG free text desc.long-chain-3-hydroxyacyl-CoA dehydrogenase activity
EggNOG OGsCOG0183@1,KOG1392@2759
Ec32 ortholog descriptionAcetyl-CoA acetyltransferase subunit, putative mitochondrial presursor Acetyl-CoA acetyltransferase,
Ec32 orthologEc-19_004630.1
EC2.3.1.16
Cds size555
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462741.3413205-CDS-Ecto-sp13_S_contig13899:255..3771681462741.3413205-CDS-Ecto-sp13_S_contig13899:255..377Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13899 256..377 +
1681462741.3580122-CDS-Ecto-sp13_S_contig13899:1004..10861681462741.3580122-CDS-Ecto-sp13_S_contig13899:1004..1086Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13899 1005..1086 +
1681462741.3680851-CDS-Ecto-sp13_S_contig13899:1377..14601681462741.3680851-CDS-Ecto-sp13_S_contig13899:1377..1460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13899 1378..1460 +
1681462741.3782032-CDS-Ecto-sp13_S_contig13899:2632..27261681462741.3782032-CDS-Ecto-sp13_S_contig13899:2632..2726Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13899 2633..2726 +
1681462741.3925328-CDS-Ecto-sp13_S_contig13899:3925..40991681462741.3925328-CDS-Ecto-sp13_S_contig13899:3925..4099Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13899 3926..4099 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13899.3044.1prot_Ecto-sp13_S_contig13899.3044.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13899 256..4099 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13899.3044.1

>prot_Ecto-sp13_S_contig13899.3044.1 ID=prot_Ecto-sp13_S_contig13899.3044.1|Name=mRNA_Ecto-sp13_S_contig13899.3044.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp
SANQAICNGAEKILAGTADVVLAGGVETFSDLPIRFSRPIRNRLLNLGKA
QKKGLPGVLGLLKGLKLKDIAPETPAIANYTTGEVMGHSSDRLSGRFGIS
RQEQDEFALRSHQNAAKAHADGIYDQEIIPVDGSTEENGVKGESTLEKLG
SLKPAFVKPHGTHTAANSSFLSDGASAALIMSEGR
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mRNA from alignment at Ecto-sp13_S_contig13899:256..4099+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13899.3044.1 ID=mRNA_Ecto-sp13_S_contig13899.3044.1|Name=mRNA_Ecto-sp13_S_contig13899.3044.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3844bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13899:256..4099+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGCCAACCAGGCCATCTGTAATGGCGCCGAGAAGATTCTCGCCGGTAC
CGCCGACGTCGTGCTCGCTGGTGGCGTGGAGACGTTTTCGGACCTACCTA
TTCGCTTCTCGCGGCCAATCAGGTACGCCGCACAGCATGCACGTCCGATG
GGCTCTCGTTATGTAGTTGCTAACCCTACATGCAGGTGTCGATGATTTGT
TGGGGGATGTTGGTATTGGTTGTGTGGTGTCCTTGTCGTGAGTCTTTCCC
TGCTTTTCATGGAGCCCTATTGGTCGTCCAATTTGTGTAAGACTGCTCGC
GGCCTCTGTCTACCGTCTGGTGGCTTTTGCCGCACCTACCGGGAGAACTC
ATCCGATGCCACACACAGAAGCGTAGTATTCCTCTGAGGTGCACGCCTCC
CTTCATTTTTCATTCACCCGAGGAAGGCACACAGTCAGCCGTCCTGCCCC
CGCGTGCTCTCGAAGAACTAGCTTAATTTCGCCACCGTGTGCTCGTTCAG
CCACGACATTCATCCTTCCACAAAAAAAATGGTTCCCGAGGGGGTGATAT
ACACAAGCAACGTAGGAATTTCCGTTGTTTTCGCTGGTACTCAAGGTTTA
GACGTGGTTGTTCGGGGGCGCGTGCACTGTTTTGATTCGACCTTTTTTGC
TCCTTGGTGGTGTACAGCTTTCGGTCGCCGTGTCGATCGGCAAGTCAGCA
AGCAGCCTACCGATCCGTCGTGTCCGTCCCGCGCGTGTCCGGCACACAGG
AACCGCCTTCTCAACCTGGGGAAGGCCCAGAAGAAGGGCCTTCCGGGCGT
CTTGGGGCTTCTGAAAGGGCTAAAGCTCAAGGTACATCAACCTCATGGTG
AATCAAACCTCTCACCCCCCCCAGCGAGCACGCGGTAGGTGTTTCGTAAA
CAGCAAGTTCGGAGTGTTCATTTTTTGCGTTGGGGGGAGACGTCGTGGAT
GGTTGTAGCACCCCCCCTGCAAGGCTGCGCAGGGACGCTCCGCGGGATGA
TTATTTTCGCTCCCACATATGTTTGGGCGTACCGTTTTGATCGTCAAACC
CTCACTCGATCTCACCTCTCGTTTTGCGCCCTGGTGCATGTTGTCCGGGG
CGCTTGTTGTGGGACACCGTAGGATATCGCTCCGGAGACGCCCGCCATCG
CCAACTACACAACCGGGGAGGTTATGGGGCACAGCAGCGATCGCCTCTCC
GGGAGGTAGGAGTCTACGTAGAATATTGTTGCGTATCTACAGAGATTGAT
GCCGTTGCCAAATTGAAAGCTGGCTGAAAAACGTTTTTCGTGAAGTGGGG
TGTGAAAATTGTGCATCGCCAGGTGTCCATCGATAACACGAAATATATCA
GCTGAGGTGCTTGGTGGGAAAGAGGCTTTCAAAACGTGACAATCTGAAAG
GCCGCAATGACCTGTTCTAAGACTCCTTTTCGAGTGGCGTGGCGCGCGCT
GCTGTTGAGTAATTCGTGGCGACGTGAGTAAAGTATACATTGACGAAGCG
TAGTAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGACGCTGATGT
CCTCTGGAGATCCTGGCTCCTCGTACAATTCGCGTCGCTCTGATTCATGA
TTCTGAGTCTGCCAGCAAACGTACCCATGAATGCATACCGTAAGAGGCGT
AGAGAAGACACCCCCCAAACAACGATTTTCACAGTTCCATTGCTGGACGT
CGAAGCTTGTGCCAACACTAGTAATGGTGGGTTCGGAAACATCTTGTCGA
GGGCTTTCCGTAGACGTGTTGGGCTCTTTCAGCACCCCGTTGGTTGTGGA
GCAGTCGAATCGAGCTTAGAAGGCCGGTCTAGGGGAGGTGCCATCTATCC
GACTCTTACGGAATACCACAGTACGGTATATGGTACGGTACAGACAGTCT
TTGGTCGTGGAGCAATCGAGCTTAGGATGTCGGTCTAGGGGAGGTGCCAA
TCTCCCCGCCTCTTGCGGTAAGCTAGGAGACAGTGATTGCTCTATGTGTG
CCGTCGTTGGGTAAGTTTCCCCATCTTCTCTTGATACCTTGTTGTCATTT
TTGACAACCTTAGTAGTATACCCTTGGCCGGGACGGTCATGGTGCGTCCG
TCACCCTGTTCGTTCCTCGCCTACGGCCTTCTCGGTAACTCACTAGCCTC
TATCAGGAATCGATCAGAAAAAGATCCTGCGGTGCAGGCCTTGCCCTTTC
TGCTGCGAGGGGGGTTAGAGTTCGTCTGGATCGGTTTAAATCCGTCTGAG
ATGTTCTTGTTCCCAGGTTCGGGACGTTCCGCTTGCAGCAGGCCTGGGTC
TGCGTTCCGCTAATGGTGAAATTGATTTCGTTTTGTGTCTTAGTGGGACG
TTAATTTCATACTTCTGTTTATGTCAGGTTTGGTATTTCAAGGCAGGAAC
AGGATGAGTTCGCGCTGCGGTCCCACCAGAACGCGGCAAAGGCTCACGCG
GATGGAATCTATGACCAGGAGGTATGGTATGCATGCGCAAAGGGTAGCAA
GCACACGCCCATCCTTTCTGTTGCTTGGCGCGAGTTTTTGGGTTGGTTGA
GTGCCTTCATTTCTGGGACGAATCTCGTGTGGCAGATGTTTCCTCCCTCT
GGTATATCTCGAATGGTAAGGTGTTCCCCTTGAGTCGAATGTACGCTGAT
TCCCGTCCATCACTCTCCGCTGCTTTCCTGTTCGGGAGACTGATAGTCGT
ACCCCTTCGGAGCGACGAAGGCCCAAACGAACCATAATACCGGTAGCTCG
TAGCATGTTTGTCTCTTACTCTTCTTGGGAAAACATTCGGAACGTACTAA
ATATCAAGCCATGGTAGAGCTTCATTTAGCCGACAGCACCCTCTCCCCTG
CCGGGCTGGTCCCGCCCTCCCGCGAGTTCCCATCCCGACAAAAGCGGGAC
TAGAGTACACCACCGTGGGTGACGTAAGATATCACACCCCCTGGGCCGAC
TTTCAAAGCTCGGATACTCCACAGCAACAACCACTTGGAACCGTCTTGTC
GAGAGCTTTCCGAAAACGTACGGTTTGTTAAATACATACCACATCCTTTC
GTTGTGGTGTAGTCGAACGTTGAAAATTGGTCCAATGGGGTGTGGTATCT
TGTGTCATGTCACCTACGGTACTGTTGTGTTGTACTTTCGCAGGCACCAA
TGCCTTACTTACAGCTGGTGGGATGCACCTGCCTCCGTCGTTTTGATGCC
GCGGGTTCAGTTTTTGACTGGTGATGACCATGTGCCCCGGCGCGAAAGAT
AAAACGCCGGGCGAGGGTTAGTACGGCAAGACCTATCCTGCTGTGTTAGC
AAGACCAATGCAACGATGGATGTCTGGCAAGTGCACCATATCTATCGACA
TCAAACAGGGTACTGCGGTATACCCCCGTTCCCTATTGTTCAATTTTGTG
CCTTTCCAAGTGTAGTAGCGGAGTTCTTCCATTGGACAGATAAAATTGTT
CCGATAAAGTAGCGGAACTCTTCCATTGGACAGAAATGGTTTTCGGATGT
AGTAGCGGGACTCTTCCACCGGATAGAAGAACCACCGAGAACAGCATCCA
CCACTACCACCACCACCATGTACTGTTACGTGCTCGTGCCCCACCGTGCA
AGCTTCCCTGATCTGCCTGTCTCTGTCGACCATGTACTTGCGCCTCGTTG
ATTTATTCTTTCCGGCGCAGATTATCCCTGTGGACGGAAGCACCGAGGAA
AACGGAGTGAAGGGAGAATCCACTCTCGAGAAGCTGGGCTCGCTCAAGCC
GGCCTTCGTGAAGCCCCACGGGACGCACACCGCCGCCAACTCGTCCTTCC
TCAGCGACGGAGCCTCGGCCGCGCTCATCATGTCGGAGGGCAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13899:256..4099+

>mRNA_Ecto-sp13_S_contig13899.3044.1 ID=mRNA_Ecto-sp13_S_contig13899.3044.1|Name=mRNA_Ecto-sp13_S_contig13899.3044.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=555bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13899:256..4099+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGCCAACCAGGCCATCTGTAATGGCGCCGAGAAGATTCTCGCCGGTAC
CGCCGACGTCGTGCTCGCTGGTGGCGTGGAGACGTTTTCGGACCTACCTA
TTCGCTTCTCGCGGCCAATCAGGAACCGCCTTCTCAACCTGGGGAAGGCC
CAGAAGAAGGGCCTTCCGGGCGTCTTGGGGCTTCTGAAAGGGCTAAAGCT
CAAGGATATCGCTCCGGAGACGCCCGCCATCGCCAACTACACAACCGGGG
AGGTTATGGGGCACAGCAGCGATCGCCTCTCCGGGAGGTTTGGTATTTCA
AGGCAGGAACAGGATGAGTTCGCGCTGCGGTCCCACCAGAACGCGGCAAA
GGCTCACGCGGATGGAATCTATGACCAGGAGATTATCCCTGTGGACGGAA
GCACCGAGGAAAACGGAGTGAAGGGAGAATCCACTCTCGAGAAGCTGGGC
TCGCTCAAGCCGGCCTTCGTGAAGCCCCACGGGACGCACACCGCCGCCAA
CTCGTCCTTCCTCAGCGACGGAGCCTCGGCCGCGCTCATCATGTCGGAGG
GCAGG
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