prot_Ecto-sp13_S_contig13886.3036.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13886.3036.1
Unique Nameprot_Ecto-sp13_S_contig13886.3036.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length416
Homology
BLAST of mRNA_Ecto-sp13_S_contig13886.3036.1 vs. uniprot
Match: D7G4M6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M6_ECTSI)

HSP 1 Score: 548 bits (1413), Expect = 3.480e-193
Identity = 322/387 (83.20%), Postives = 327/387 (84.50%), Query Frame = 0
Query:   41 MCGKVLDPGSEDKSKDAAAADDTAAEGQSTPEESHGRRKGLGHQFSSGNSDGYSDAGAVDSMDPDMAGGLWRGSSGDFEKGRPVPSGFWRRHSKGRLSWSDDYQGGCLAEYYEDERSRMVSESSSVPPGDTDVSTSAEXXXXXXXXXXXXXXXXXXXATGSRADGCIVQSCRSQGERSSTAAASPDTNTPKQPKKGSEPPGLFMGQDEDGEVFHSALQLADEDDDLEGREGGCAALVRRDTFYGDVQ------------EKLEDRSVRVSAAKGGSGXXXXASSLGGEPAKHEQSEGSGCXXXXXXXXXXGDTGVAAGSGGGTGTPTAGTSPGTWSPQWGWYVTMTPPQDQYPAQQFPIPGAKPPTPTASATASDVPTSAKGRPPRP 415
            MCGKVLDPGSEDKSKDAAAAD TAAEGQSTPEESHGRRKGLGHQFSSGNSDG SDAGAVDSMDPDMA GLWRGSSGDFEKGRPVP GFWRRHSKGRLSWSDDYQGGCLAEYYEDERSRMVSESSSVPPGDTDVSTSA     XXXXXXXXXXXXXX      AD CI               ASP  N  KQP+KGSEPPGL  GQDEDG+VFHSALQL DEDDDL G +GGCAALVRRDTFYGDVQ            EK+EDR+VR SAAKGGSG    ASSLGGEPAKHEQSEGSGCXXXXXXXXXXGDTGVAA SGGGTGTPTAGTSPGTWSPQWGWYVTMTPPQDQYPAQQFPIPGAKPPTPTASA ASDV TSAKGRPPRP
Sbjct:    1 MCGKVLDPGSEDKSKDAAAADATAAEGQSTPEESHGRRKGLGHQFSSGNSDGNSDAGAVDSMDPDMAEGLWRGSSGDFEKGRPVPPGFWRRHSKGRLSWSDDYQGGCLAEYYEDERSRMVSESSSVPPGDTDVSTSAPAAGVXXXXXXXXXXXXXX------ADSCIXXXXXXXXXXXXXXXASPSPNATKQPEKGSEPPGLSTGQDEDGDVFHSALQLVDEDDDLGGLDGGCAALVRRDTFYGDVQIPPMRVLDSPSQEKMEDRNVRFSAAKGGSGGGAAASSLGGEPAKHEQSEGSGCXXXXXXXXXXGDTGVAADSGGGTGTPTAGTSPGTWSPQWGWYVTMTPPQDQYPAQQFPIPGAKPPTPTASAAASDVHTSAKGRPPRP 381          
BLAST of mRNA_Ecto-sp13_S_contig13886.3036.1 vs. uniprot
Match: A0A6H5JYV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV7_9PHAE)

HSP 1 Score: 496 bits (1276), Expect = 4.800e-173
Identity = 293/337 (86.94%), Postives = 302/337 (89.61%), Query Frame = 0
Query:   79 KGLGHQFSSGNSDGYSDAGAVDSMDPDMAGGLWRGSSGDFEKGRPVPSGFWRRHSKGRLSWSDDYQGGCLAEYYEDERSRMVSESSSVPPGDTDVSTSAEXXXXXXXXXXXXXXXXXXXATGSRADGCIVQSCRSQGERSSTAAASPDTNTPKQPKKGSEPPGLFMGQDEDGEVFHSALQLADEDDDLEGREGGCAALVRRDTFYGDVQEKLEDRSVRVSAAKGGSGXXXXASSLGGEPAKHEQSEGSGCXXXXXXXXXXGDTGVAAGSGGGTGTPTAGTSPGTWSPQWGWYVTMTPPQDQYPAQQFPIPGAKPPTPTASATASDVPTSAKGRPPRP 415
            +GLGHQFSSGNSDG S+AG VDSMD DMAGGL RGSSGDFE GRPVP GFWRRHSKGRLSWSDDYQGGCLAEYYEDERSRMVSESSSVPPGDTDVSTSAEXXXXXXXXXXXXXX     +TGSRAD  IVQSCRS+   SS AAASPD NTPKQP+KGSE PGLFMGQD+DGEVFHSALQLA EDDDLEG +GGCAALV RDTFYGDVQEK+EDRSVRVS A     XXXX  SLGGEPAKHEQSEGSGC  XXXXXXXXGDTGV AGSGGGTGTPTAGTSPGTWSPQWGWYVTMTPPQDQYP QQFPIPGAKPPTPTASA ASDVPTSAKGRPP+P
Sbjct:    5 EGLGHQFSSGNSDGDSNAGDVDSMDLDMAGGLLRGSSGDFENGRPVPPGFWRRHSKGRLSWSDDYQGGCLAEYYEDERSRMVSESSSVPPGDTDVSTSAEXXXXXXXXXXXXXXEG---STGSRADSRIVQSCRSKVGGSSAAAASPDPNTPKQPEKGSEHPGLFMGQDQDGEVFHSALQLA-EDDDLEGLDGGCAALVHRDTFYGDVQEKMEDRSVRVSIAGXXXXXXXXXXSLGGEPAKHEQSEGSGCRGXXXXXXXXGDTGVVAGSGGGTGTPTAGTSPGTWSPQWGWYVTMTPPQDQYPTQQFPIPGAKPPTPTASAAASDVPTSAKGRPPKP 337          
BLAST of mRNA_Ecto-sp13_S_contig13886.3036.1 vs. uniprot
Match: A0A6H5JWX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX8_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 3.120e-20
Identity = 52/58 (89.66%), Postives = 53/58 (91.38%), Query Frame = 0
Query:   24 SGLIWVQKHPVLAAVIWMCGKVLDPGSEDKSKDAAAADDTAAEGQSTPEESHGRRKGL 81
             GLIWVQKHPVLAAVIWMCGKVLDPG  DKSKDAAAAD TAAEGQSTP+ESHGRRKG 
Sbjct:  289 DGLIWVQKHPVLAAVIWMCGKVLDPGP-DKSKDAAAADATAAEGQSTPKESHGRRKGA 345          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13886.3036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4M6_ECTSI3.480e-19383.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYV7_9PHAE4.800e-17386.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWX8_9PHAE3.120e-2089.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13886contigEcto-sp13_S_contig13886:544..4579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13886.3036.1mRNA_Ecto-sp13_S_contig13886.3036.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13886 544..4579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13886.3036.1 ID=prot_Ecto-sp13_S_contig13886.3036.1|Name=mRNA_Ecto-sp13_S_contig13886.3036.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=416bp
QSDPCVFVRFPFSVPSVWLWRQTSGLIWVQKHPVLAAVIWMCGKVLDPGS
EDKSKDAAAADDTAAEGQSTPEESHGRRKGLGHQFSSGNSDGYSDAGAVD
SMDPDMAGGLWRGSSGDFEKGRPVPSGFWRRHSKGRLSWSDDYQGGCLAE
YYEDERSRMVSESSSVPPGDTDVSTSAESAAGAAAAAAAAAREEGGGATG
SRADGCIVQSCRSQGERSSTAAASPDTNTPKQPKKGSEPPGLFMGQDEDG
EVFHSALQLADEDDDLEGREGGCAALVRRDTFYGDVQEKLEDRSVRVSAA
KGGSGGGAAASSLGGEPAKHEQSEGSGCRGGRGGGAAAGDTGVAAGSGGG
TGTPTAGTSPGTWSPQWGWYVTMTPPQDQYPAQQFPIPGAKPPTPTASAT
ASDVPTSAKGRPPRP*
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