prot_Ecto-sp13_S_contig13884.3035.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13884.3035.1
Unique Nameprot_Ecto-sp13_S_contig13884.3035.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1203
Homology
BLAST of mRNA_Ecto-sp13_S_contig13884.3035.1 vs. uniprot
Match: A0A6H5LNC5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNC5_9PHAE)

HSP 1 Score: 1419 bits (3673), Expect = 0.000e+0
Identity = 966/1146 (84.29%), Postives = 998/1146 (87.09%), Query Frame = 0
Query:   62 KSEELKARKRVRTCEXXXXXXXXXXXXXXASAGARAAPTEAVRASAVDSAVPGASKRARIGPRLIGREVLVSDGVAVVLTGVVTAIEAGQARLHYKGRKAKLDEWIDVRSERFLSATEAKKQIELTQLAMNPSAGHVTGR--GPAGKKRKAVPGXXXXXXXXXXSXXKRAKKGGDGDGVEKARSKKDSDKKLVDGKTVTPGGENKAAPTKAKTKTAGDGTNANATGNRKKDGKTVAAISKKHRSGEKIAN---EAAGKSSSPSRKSKTKTGKMRAVRGCETGSRSTAGGRKTGEPDIRSNASSQLKSAGGKSSQAEALGNGSSTGRSXXXXXXSSKIKHSSDKKTTKKKPRMGLTIKPTVIPXXXXXXXXXXXXXVISNRRAVVLARTFAKETEEAQKDFEEAVAAAERSRVAREQRLKASSPRVLPRPPASQGAASSYAARSVXXXXXXADDPTAPAIAVSSGPGRRCEWPDLGFGGRPWGLGPFYREEDAEGGDSSASLDPTMDREPSPSPSCASFAEGGSSHSRKPGEQGKLEQIDAHAQGCVAELGETRQGDGRAARSPVGAASASAAIPTTPPRALKEVRRARVDAGEAVDLGEDAAFRKWLGRLRAVQDIPVGHVDKCSRSLAVLLGTSPPDGSVRASVRALLVAETLRGGASHEVATFVRSLAGLMADAASKASTSKSTTSTPTVGNLVIPAGGDSHDNAQFSPGKDEVCADTLDLDAKERHFPIGDNTDPAEVSIRDKEGAAAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKKGKKTKKAAWAMRRHLEAVESAQVVLLPSSQEPPPAVVGNLLGGYPFSRSGDSLLMHAKAMVGLKRAHRWVTAWSNAPSNPPTEGAPSDMSTDNTISANINASGSNKERAGAVENGADTSKPPNNXXXXXXXXXXXXXXXXXXXXXSPLACGTGARVGPVAHPPPLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----TRRPCYSAGALIGWQHAFMPGLPPALPPHASLRAAVLSSAPATAAPHYPAAEANGATXXXXXXXXXXXXXXXXGALPTMHPRPYMHGTYGGLNADSAAAYHNALLSMWPPAAAGGVGWSTLSNAPATMPTAP 1197
            K EELKARKRVR+C+ XXXXXXXXXXX  ASAGARA PTEAVRASAVDSAVPGA KRARIGPRLIG+EVLVSDGVAVVLTGVVTAIEAGQARLHYKGRKAKLDEWIDVRSERFLSATEAKKQIELTQLAMNPSAG VTG   GPAGKKRKAVPG  XXXXXXXX XX   KKGGDGDGVEKAR KKD DKKL DGK  T GGENKA P K                NRKKDGKTVAAIS KHR GEKIA+   EAAGKSSSPSRKSKTKTGKMRAV GCETGS+S  G +K GEPDIRSN  S+LKSAGGKS QA ALGNG STGRS  XX  S K KH SDKK TKKKPRMGL+IKPT+IPXXXXXX       VISNRRA VLARTFAKETEEA+KDFEEAVAAAERSRVAREQRLK SSPRVLPRPPASQGA SSY+A+SV      A+DPTA A AVSSGPGRR  WPDLGFGG+PWGLGPFYREE+A+GGDSSASLDPTMDREPSPSPSCA+FA+GGSSHSRKPGEQGKLE IDAHA GCVAELGET QGDG AARSPVGAASASAAIPT PPRA KEVRRARV AGEAVDLGEDAAFRKWLGRLR +QDIPVGHV+KCSRSLAVLLGTSPPDGSVRASVRALLVAETLRGGASHEVATFVRSLAGLMADAASKAS  KS  STPTVGN VIP+GGDSHDNA+FSPGKD+VC DTLDLDAK+RH  +GDNTDPA VSIRDKEGAAAY            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKKGKKTKKAAWAMRRHLEAVE+AQVV+LPSSQEPPPAVVGNLLGGYPFSRSGDSLLMHAK MVGLKRAHRWVTAW NAPSNPPT GAPSD+  DN +SAN  AS S+KERAGAVENGAD       XXXXXXXXXXXXXXXXXXXXX    CGTGARVGPVAHP    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     TRRPCYSAGALIGWQHAFMPGLPPALPPHASLRAAVLSSAPATAAPHYPAAE +GA  XXXXXXXXXXXXXX GALPTMH RPYMHGT+GGLNADSAAAYHNALLSMWPPAAAGGVGWST SNAPATMP AP
Sbjct:  592 KGEELKARKRVRSCDSXXXXXXXXXXXKKASAGARATPTEAVRASAVDSAVPGALKRARIGPRLIGKEVLVSDGVAVVLTGVVTAIEAGQARLHYKGRKAKLDEWIDVRSERFLSATEAKKQIELTQLAMNPSAGRVTGPSGGPAGKKRKAVPGGSXXXXXXXXXXXXXXKKGGDGDGVEKARYKKDRDKKLGDGKAGTAGGENKAGPMKXXXXXXXXXXXXXXXXNRKKDGKTVAAISNKHRRGEKIASGAKEAAGKSSSPSRKSKTKTGKMRAVGGCETGSKSNPGRKKAGEPDIRSNGLSKLKSAGGKSGQARALGNGCSTGRSSGXXTTSRKTKHHSDKKVTKKKPRMGLSIKPTIIPXXXXXXREVPEHHVISNRRAAVLARTFAKETEEARKDFEEAVAAAERSRVAREQRLKTSSPRVLPRPPASQGAPSSYSAKSVGGGDGSANDPTAAATAVSSGPGRRYVWPDLGFGGQPWGLGPFYREEEADGGDSSASLDPTMDREPSPSPSCAAFAQGGSSHSRKPGEQGKLEHIDAHAHGCVAELGETWQGDGSAARSPVGAASASAAIPTKPPRAPKEVRRARVYAGEAVDLGEDAAFRKWLGRLRVIQDIPVGHVEKCSRSLAVLLGTSPPDGSVRASVRALLVAETLRGGASHEVATFVRSLAGLMADAASKASPPKSAASTPTVGNPVIPSGGDSHDNARFSPGKDQVCVDTLDLDAKKRHCAVGDNTDPAAVSIRDKEGAAAYAHALTYLARSKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKKGKKTKKAAWAMRRHLEAVETAQVVVLPSSQEPPPAVVGNLLGGYPFSRSGDSLLMHAKTMVGLKRAHRWVTAWLNAPSNPPTGGAPSDVGRDNIVSANTYASRSSKERAGAVENGADIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCGTGARVGPVAHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRRPCYSAGALIGWQHAFMPGLPPALPPHASLRAAVLSSAPATAAPHYPAAETSGAVAXXXXXXXXXXXXXXVGALPTMHLRPYMHGTHGGLNADSAAAYHNALLSMWPPAAAGGVGWSTPSNAPATMPAAP 1737          
BLAST of mRNA_Ecto-sp13_S_contig13884.3035.1 vs. uniprot
Match: D7G7M9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M9_ECTSI)

HSP 1 Score: 1009 bits (2610), Expect = 0.000e+0
Identity = 607/723 (83.96%), Postives = 627/723 (86.72%), Query Frame = 0
Query:   91 ASAGARAAPTEAVRASAVDSAVPGASKRARIGPRLIGREVLVSDGVAVVLTGVVTAIEAGQARLHYKGRKAKLDEWIDVRSERFLSATEAKKQIELTQLAMNPSAGHVTGR--GPAGKKRKAVPGXXXXXXXXXXSXXKRAKKGGDGDGVEKARSKKDSDKKLVDGKTVTPGGENKAAPTKAKTKTAGDGTNANATGNRKKDGKTVAAISKKHRSGEKIAN---EAAGKSSSPSRKSKTKTGKMRAVRGCETGSRSTAGGRKTGEPDIRSNASSQLKSAGGKSSQAEALGNGSSTGRSXXXXXXSSKIKHSSDKKTTKKKPRMGLTIKPTVIPXXXXXXXXXXXXXVISNRRAVVLARTFAKETEEAQKDFEEAVAAAERSRVAREQRLKASSPRVLPRPPASQGAASSYAARSVXXXXXXADDPTAPAIAVSSGPGRRCEWPDLGFGGRPWGLGPFYREEDAEGGDSSASLDPTMDREPSPSPSCASFAEGGSSHSRKPGEQGKLEQIDAHAQGCVAELGETRQGDGRAARSPVGAASASAAIPTTPPRALKEVRRARVDAGEAVDLGEDAAFRKWLGRLRAVQDIPVGHVDKCSRSLAVLLGTSPPDGSVRASVRALLVAETLRGGASHEVATFVRSLAGLMADAASKASTSKSTTSTPTVGNLVIPAGGDSHDNAQFSPGKDEVCADTLDLDAKERHFPIGDNTDPAEVSIRDKEGAAAY 808
            ASAGARA P EAVRASAV+SAVPGA KRARIGPRLIG+EVLVSDGVAVVLTGVVTAIEAGQARLHYKGRKAKLDEWIDVRSERFLSATEAKKQIELTQLAMNPSAGHVTG   GPAGKKRKAVPG          S  KRAKKGGDGDG+EKARSKKDSDKKL DGKT T GGEN                      NRKKDGKTVA ISKKHRSGEKIAN   EAA K SSPSRKSKTKTGKMRAV GCETGS+S AGG+K GEPDIRSN SSQLKSAGGKSS+AEALG    TGRSXXX   SSK KH SDKK TKKKPRMGL+IKPTVIPXXXXXXXXXXXXX      AVVLARTFAKETEEAQK+FEEAVAAAERSRVAREQRLK SS RVLPRPPASQGAASSYAA   XXXXX A+DPTA A AVSSGPGRRC WPDLGFGG+PWGLGPFYRE +AEGG SSASLDPT+DR+PS SPSCASFAEGGSSHSRKPG+QGKLE ID HAQGCVAELGETRQGDG AARSPVGAASASA IPT PPRAL+EVRRARVDAGEAVDLGEDAAFRKWLGRLRA+QDIPVGHV+KCS SLAVLLGTSPPDGSVRASVRALLVAETLRGGASHEVATFVRSLAGLMADAASKAS SKS  STPTVGN VIP+GGDSHDNAQFSPGKDEVC DTLDLDAK+ H  +GDNTDPA VSIRDKEGAAAY
Sbjct:  120 ASAGARATPIEAVRASAVESAVPGALKRARIGPRLIGKEVLVSDGVAVVLTGVVTAIEAGQARLHYKGRKAKLDEWIDVRSERFLSATEAKKQIELTQLAMNPSAGHVTGPSGGPAGKKRKAVPGGGGSEKTGGRSSGKRAKKGGDGDGIEKARSKKDSDKKLGDGKTGTAGGENXXXXXXXXXXXXXXXXXXXXXXNRKKDGKTVAFISKKHRSGEKIANGAKEAAVKISSPSRKSKTKTGKMRAVGGCETGSKSKAGGKKAGEPDIRSNGSSQLKSAGGKSSKAEALGXXXXTGRSXXXGTTSSKTKHHSDKKVTKKKPRMGLSIKPTVIPXXXXXXXXXXXXXXXXXXXAVVLARTFAKETEEAQKNFEEAVAAAERSRVAREQRLKTSSSRVLPRPPASQGAASSYAAXXXXXXXXSANDPTATATAVSSGPGRRCVWPDLGFGGQPWGLGPFYREAEAEGGGSSASLDPTIDRKPSLSPSCASFAEGGSSHSRKPGKQGKLEHIDGHAQGCVAELGETRQGDGSAARSPVGAASASAEIPTKPPRALREVRRARVDAGEAVDLGEDAAFRKWLGRLRAIQDIPVGHVEKCSGSLAVLLGTSPPDGSVRASVRALLVAETLRGGASHEVATFVRSLAGLMADAASKASPSKSAASTPTVGNPVIPSGGDSHDNAQFSPGKDEVCVDTLDLDAKKGHCAVGDNTDPAAVSIRDKEGAAAY 842          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13884.3035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LNC5_9PHAE0.000e+084.29JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G7M9_ECTSI0.000e+083.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 833..853
NoneNo IPR availableCOILSCoilCoilcoord: 446..466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13884contigEcto-sp13_S_contig13884:1..4581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13884.3035.1mRNA_Ecto-sp13_S_contig13884.3035.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13884 1..4581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13884.3035.1 ID=prot_Ecto-sp13_S_contig13884.3035.1|Name=mRNA_Ecto-sp13_S_contig13884.3035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1203bp
RTGKTSGGGNSGAAGGGGGDGSGNSSSSGGVSSVQNSAGGGTSENQSLAK
NNAVPTKKTVVKSEELKARKRVRTCESGGGGGGACSSTKKASAGARAAPT
EAVRASAVDSAVPGASKRARIGPRLIGREVLVSDGVAVVLTGVVTAIEAG
QARLHYKGRKAKLDEWIDVRSERFLSATEAKKQIELTQLAMNPSAGHVTG
RGPAGKKRKAVPGGGGSEKNGGGSGGKRAKKGGDGDGVEKARSKKDSDKK
LVDGKTVTPGGENKAAPTKAKTKTAGDGTNANATGNRKKDGKTVAAISKK
HRSGEKIANEAAGKSSSPSRKSKTKTGKMRAVRGCETGSRSTAGGRKTGE
PDIRSNASSQLKSAGGKSSQAEALGNGSSTGRSSGGGTTSSKIKHSSDKK
TTKKKPRMGLTIKPTVIPPPVVVQREVPEHHVISNRRAVVLARTFAKETE
EAQKDFEEAVAAAERSRVAREQRLKASSPRVLPRPPASQGAASSYAARSV
GGGGGSADDPTAPAIAVSSGPGRRCEWPDLGFGGRPWGLGPFYREEDAEG
GDSSASLDPTMDREPSPSPSCASFAEGGSSHSRKPGEQGKLEQIDAHAQG
CVAELGETRQGDGRAARSPVGAASASAAIPTTPPRALKEVRRARVDAGEA
VDLGEDAAFRKWLGRLRAVQDIPVGHVDKCSRSLAVLLGTSPPDGSVRAS
VRALLVAETLRGGASHEVATFVRSLAGLMADAASKASTSKSTTSTPTVGN
LVIPAGGDSHDNAQFSPGKDEVCADTLDLDAKERHFPIGDNTDPAEVSIR
DKEGAAAYAYALTYLARSKRKQDRAAALAIREKEEAEAVAAAAAAALAEA
QSSKKGKKTKKAAWAMRRHLEAVESAQVVLLPSSQEPPPAVVGNLLGGYP
FSRSGDSLLMHAKAMVGLKRAHRWVTAWSNAPSNPPTEGAPSDMSTDNTI
SANINASGSNKERAGAVENGADTSKPPNNKTNSSSKEREGAVEKGSDVIK
SPLACGTGARVGPVAHPPPLVVASTPPAPATHRSLLATTAASRASATHAS
PLVAAAAASAAAAAATRRPCYSAGALIGWQHAFMPGLPPALPPHASLRAA
VLSSAPATAAPHYPAAEANGATAAATAATAAAAAAAAVGALPTMHPRPYM
HGTYGGLNADSAAAYHNALLSMWPPAAAGGVGWSTLSNAPATMPTAPAPT
PAP
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