mRNA_Ecto-sp13_S_contig103.303.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig103.303.1
Unique NamemRNA_Ecto-sp13_S_contig103.303.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Match: A0A6H5K2Q3_9PHAE (GPN-loop GTPase 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2Q3_9PHAE)

HSP 1 Score: 619 bits (1595), Expect = 1.950e-222
Identity = 319/347 (91.93%), Postives = 322/347 (92.80%), Query Frame = 1 
Query:   40 MGKCCQMVMGPAGTGKSTYCKIMQEHCQNAKRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNYNVCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGEREGGDEDEEENVMDDEGLGRGAG------GEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQPKDDV 1062
            MGKCCQMVMGPAGTGKSTYCKIMQEHCQNAKRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNYNVCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGER GG+ED                      GEESADVGTGATTAQREELQPRGRLQ LGAQ G+EGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQPKDD+
Sbjct:    1 MGKCCQMVMGPAGTGKSTYCKIMQEHCQNAKRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNYNVCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGER-GGEEDXXXXXXXXXXXXXXXXXXXXXXGEESADVGTGATTAQREELQPRGRLQVLGAQGGVEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQPKDDI 346
[Close]
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Match: A0A835YPS9_9STRA (GPN-loop GTPase 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS9_9STRA)

HSP 1 Score: 375 bits (964), Expect = 1.160e-126
Identity = 200/355 (56.34%), Postives = 246/355 (69.30%), Query Frame = 1 
Query:   46 KCCQMVMGPAGTGKSTYCKIMQEHCQNAKRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYS----------------HVPVMRNVLDQLKSWNYNVCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGEREGGDEDEEENVMDDEGLGRGAGGEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQPKDDV 1062
            +CCQMVMGPAG GKSTYCK +Q++   ++RT+HVVNLDPAAE FEY+VAFD+RDLI+L D MEELELGPNGGLVYCMEYLLDN+DWLKDELD +DDDEYI+FDCPGQVELYS                H+PVM+ +L+  + W Y VC V+ LDATF+ DPAKF+SG LLSLSAMVQLELPH+NVLTKCDLAD  EVE+FLD ++AAL SMH            A  +  +R GG++            G+GA G      G  A+ A R+E           A      AQ+  LPRL RLT AI+G++D+++MV F+P+DI D++ +ALVL HAD+I QYGE LEPK P D+ 
Sbjct:    2 RCCQMVMGPAGVGKSTYCKAIQDYAATSRRTIHVVNLDPAAEAFEYDVAFDVRDLITLADVMEELELGPNGGLVYCMEYLLDNVDWLKDELDNYDDDEYIVFDCPGQVELYSYEXXXXXXXXXXXXXXHIPVMKRLLEHFRYWGYTVCGVYALDATFMGDPAKFISGTLLSLSAMVQLELPHINVLTKCDLADMEEVEKFLDLDSAALASMHE----------LATRSSRQRLGGEQG-----------GQGAVG------GAAASDAARQEGSHI-------AAPASSSAQQRALPRLERLTAAIAGIIDEFSMVGFIPMDISDDQSVALVLQHADHITQYGEGLEPKDPDDEA 322
[Close]
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Match: A0A7S2XYS1_9STRA (GPN-loop GTPase 3 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYS1_9STRA)

HSP 1 Score: 341 bits (874), Expect = 6.380e-114
Identity = 178/332 (53.61%), Postives = 222/332 (66.87%), Query Frame = 1 
Query:   64 MGPAGTGKSTYCKIMQEHCQNAKRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNYNVCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGEREGGDEDEEENVMDDEGLGRGAGGEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQPKDD 1059
            MGPAG+GKSTYC  +QEHC N+KR+VHVVNLDPAAE F Y V+FDI+DLIS++D MEEL  GPNG LVYCMEYLL+NMDWL+DELD++ DDEYIIFDCPGQVELYSH+PVMR+V+D+LK W+YNVC VFL+D+  + DP K +SG L+SLSAMVQLELPH+NVLTKCDL D+  ++ F + E +   ++H  QA                                            VG G T  +R +                         +LARLT+AI  V+DD+TMV+F+PLD+RDE+ I LVL HAD+++QYGEDLEPK+PKDD
Sbjct:    1 MGPAGSGKSTYCNAIQEHCDNSKRSVHVVNLDPAAEEFAYRVSFDIKDLISVDDVMEELGYGPNGALVYCMEYLLENMDWLRDELDEYGDDEYIIFDCPGQVELYSHIPVMRDVVDRLKMWDYNVCGVFLVDSLVVGDPMKLLSGTLISLSAMVQLELPHVNVLTKCDLVDKEILDNFFE-EISVRQAVHNSQA--------------------------------------------VG-GGTLLRRNQ-------------------------KLARLTDAICSVVDDFTMVSFVPLDLRDEDSIGLVLAHADHVIQYGEDLEPKEPKDD 261
[Close]
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Match: A0A024U8U1_9STRA (GPN-loop GTPase 3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024U8U1_9STRA)

HSP 1 Score: 311 bits (796), Expect = 2.820e-102
Identity = 162/337 (48.07%), Postives = 211/337 (62.61%), Query Frame = 1 
Query:   52 CQMVMGPAGTGKSTYCKIMQEHCQNAKRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNYNVCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGEREGGDEDEEENVMDDEGLGRGAGGEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQPKDDV 1062
            CQ+VMGPAGTGKSTYCK M E C  + R  +VVNLDPAAE+F+Y VAFDIRDLISLED MEEL  GPNGGLVYCMEYL+ N+DWL+D L ++ DD+Y IFDCPGQ+ELYSH+PVM+++   L+ W++++C V+L+D+ FI+DP+KF+SG L SLSAMVQLELPH+NVLTKCDL D  E+E++LD  +  L+                                                  +  T ATT    + QP                          L+ A+  V++DY+MV F+P++I DEE I +VLHH D+ + YGED+EPK+PKDD+
Sbjct:    4 CQIVMGPAGTGKSTYCKNMHEFCAASGRLTYVVNLDPAAESFDYPVAFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLLEYSDDDYFIFDCPGQIELYSHLPVMKHLCTALQEWSFSICGVYLIDSLFISDPSKFISGILCSLSAMVQLELPHVNVLTKCDLVDEQELEKYLDPSSGYLL--------------------------------------------------ETLTNATT---NKWQP--------------------------LSRAVCNVINDYSMVAFVPMNITDEESIEMVLHHIDHAINYGEDVEPKEPKDDM 261
[Close]
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Match: A0A6U0IL03_9STRA (GPN-loop GTPase 3 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IL03_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.070e-101
Identity = 173/341 (50.73%), Postives = 229/341 (67.16%), Query Frame = 1 
Query:   40 MGKC-CQMVMGPAGTGKSTYCKIMQEHCQNA----KRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNY--NVCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGEREGGDEDEEENVMDDEGLGRGAG-GEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLE 1038
            MG+C  Q+V GPAG+GKSTYC+ +QEHC       KR VH+ NLDPAAE F+Y+VAFD+RDLIS++D MEEL LGPNGGL+YCMEYLL+N+DWL D L++FDDDEY+I DCPGQ+ELY+HVPVMR ++D +++  Y  ++ +VF++DATF+ D  KF+SG+LLSLSAM+ LELPH+NVL+KCDL D+  V+  L+TE+A  +     +A+R        F RGE            M+    G  A  G E  +    A     +E Q R           +E  +R    +  RLTEAIS +LDD++MV+F+PLDI DEE I LVL   D+++QYGED E
Sbjct:    1 MGRCKIQIVTGPAGSGKSTYCQAIQEHCATLGPLRKRKVHIANLDPAAENFKYDVAFDVRDLISVDDVMEELGLGPNGGLIYCMEYLLENLDWLLDNLNQFDDDEYLIVDCPGQIELYTHVPVMRRIIDAMRTAGYASDMVSVFIVDATFVADAPKFISGSLLSLSAMIALELPHVNVLSKCDLVDKERVDEILETESAIQLWEIEDRARRREELAVEAFERGES-----------MEPYLAGSSASKGFEPGEKLVKANDTPSKESQKRSAA--------IEHRRR----KRDRLTEAISSLLDDFSMVSFMPLDITDEESIDLVLMTVDHVIQYGEDSE 318
[Close]
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Match: A0A1E7FU52_9STRA (GPN-loop GTPase 3 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FU52_9STRA)

HSP 1 Score: 306 bits (785), Expect = 1.260e-99
Identity = 171/347 (49.28%), Postives = 224/347 (64.55%), Query Frame = 1 
Query:   40 MGKC-CQMVMGPAGTGKSTYCKIMQEHCQ----NAKRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNYN--VCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGV----HF---GTAPFNRGEREGGDEDEEENVMDDEGLGRGAGGEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLE 1038
            MG+C  Q+VMGPAG+GKSTYC+ MQ H      + KRT+HV NLDPAAE F Y++AFDIRDLIS+E+ MEEL LGPNGGL+YCME+LL+N+DWL+D LD F DDEY+I DCPGQ+ELY+H+P+MRN++D++K W YN  + AVFLLDATF+ D +KF+SG+LLSLSAM+ LELPH N+LTKCDL   +EVE  LD    A       Q +  +    H    G +PF   +R   D D  E  + +E                               ++   AQR ME  +R       RLT++IS +LDDY+M+ F+PL+I+DE+ +  VL   D  +QYGE+LE
Sbjct:    1 MGRCYIQIVMGPAGSGKSTYCQAMQYHASTLGASRKRTIHVANLDPAAEDFGYQLAFDIRDLISVEEVMEELNLGPNGGLIYCMEFLLNNLDWLQDHLDSFGDDEYLILDCPGQLELYTHIPLMRNLIDRMKMWGYNHTMAAVFLLDATFVADTSKFLSGSLLSLSAMIALELPHTNILTKCDLLTEAEVEEVLDYGGGATQLWDREQDRNSILMPNHLSTTGNSPFGNDDRNIIDRDNVEQEITEE-------------------------------VEITDAQRNMERRRR----HRQRLTDSISQLLDDYSMICFVPLNIKDEDSVDNVLACVDASIQYGENLE 312
[Close]
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Match: A0A448YVL8_9STRA (GPN-loop GTPase 3 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVL8_9STRA)

HSP 1 Score: 304 bits (778), Expect = 6.150e-99
Identity = 172/343 (50.15%), Postives = 221/343 (64.43%), Query Frame = 1 
Query:   40 MGKC-CQMVMGPAGTGKSTYCKIMQEHCQNA----KRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNY--NVCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGEREGGDEDEEENVMDDEGLGRGAGGEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQ 1047
            MG+C  Q+VMGPAG+GKSTYC+ MQ H        KRT+HV NLDPAAE F Y++AFDIRDLIS+E+ MEEL+LGPNGGLVYCMEYLL N+DWL+D LD FDDDEY+I DCPGQ+ELY+H+P+MRN++D+++ W Y   + AVFLLDATF+ D +KF+SG+LLSLSAM+ LELPH NVLTKCDL    EVE  LD  +A    M   +  R       PF+                                  T A++ Q +E+           QR +E  +R       RLT++IS +LDDY+M++F+PL+IRDEE I  +L   D  +QYGEDLE ++
Sbjct:    1 MGRCFIQIVMGPAGSGKSTYCQAMQYHASTLGGARKRTIHVANLDPAAEDFGYQLAFDIRDLISVEEVMEELDLGPNGGLVYCMEYLLSNLDWLQDHLDSFDDDEYLILDCPGQLELYTHIPLMRNLIDRMRMWGYAHTMAAVFLLDATFVGDTSKFLSGSLLSLSAMIALELPHTNVLTKCDLLTDEEVEDILDHGSAT--QMWDREQDRQSLIMPTPFSV---------------------------------TAASSNQGDEVTEE--------QRRLERRRR----HRQRLTDSISQLLDDYSMISFIPLNIRDEESIDALLTCVDGSIQYGEDLEVRE 296
[Close]
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Match: A0A7S2RLE6_9STRA (GPN-loop GTPase 3 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RLE6_9STRA)

HSP 1 Score: 303 bits (775), Expect = 2.680e-98
Identity = 167/340 (49.12%), Postives = 223/340 (65.59%), Query Frame = 1 
Query:   40 MGKC-CQMVMGPAGTGKSTYCKIMQEHCQNA----KRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNYN--VCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGEREGGDEDEEENVMDDEGLGRGAGGEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLE 1038
            MG+C  Q+V GPAG+GKSTYC+ +QEHC N     +R VHV NLDPAAE F Y++AFDIRDLIS++D MEEL LGPNGGL+YC+EYLL+NMDWL+DELD FDDDEY++ DCPGQ+ELY+H+PVM+ ++DQL+ W Y+  V +VF++DATF+ D  KF+SG+LLSLSAM+ LELPH+NV++KCDL D  +VER L TE+A    ++  +     H     F R             +++  G                   A +E+           A R    A+R    +  +LT++I  VLDD++MV+F+PL+I+DEE I  VL H D  +QYGED E
Sbjct:    3 MGRCFIQIVTGPAGSGKSTYCRAIQEHCANLGKLRRRRVHVANLDPAAENFGYDLAFDIRDLISVDDVMEELGLGPNGGLLYCIEYLLENMDWLQDELDAFDDDEYLLLDCPGQIELYTHIPVMKRIVDQLRLWGYDGTVASVFVVDATFLCDAPKFISGSLLSLSAMLSLELPHVNVMSKCDLVDNEQVERVLGTESAT--QLYELEEYNLKHQDLEDFKR-----------VTILEKSG------------------NASKEDK----------AWRRQVDARR---QKQNKLTKSICNVLDDFSMVSFIPLNIKDEESIDNVLMHVDQTIQYGEDTE 298
[Close]
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Match: A0A1V9ZAW3_9STRA (GPN-loop GTPase 3 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZAW3_9STRA)

HSP 1 Score: 301 bits (771), Expect = 2.770e-98
Identity = 157/352 (44.60%), Postives = 206/352 (58.52%), Query Frame = 1 
Query:   46 KCCQMVMGPAGTGKSTYCKIMQEHCQNAKRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNYNVCAVFL--------------LDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGEREGGDEDEEENVMDDEGLGRGAGGEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQPKDD 1059
            +CCQ+VMGPAGTGKSTYCK M EHC    R  ++VNLDPAA+ F+Y VAFDIRDLISLED MEEL  GPNGGLVYCMEYL+ N+DWL+D L ++ DD+Y IFDCPGQ+ELYSH+PVM+++   L  W + +C V+L              +D+ FI+DP+KF+SG L SLSAMVQLELPH+NVLTKCDLAD  E+E++LD  +  L+                                                        T A  ++ QP                          L+ A+  V++DY+MV F+P++I DE+ + +VL H D+ + YGED+EPK+PKD+
Sbjct:    2 RCCQIVMGPAGTGKSTYCKNMHEHCATTGRMTYIVNLDPAADNFDYPVAFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLVEYSDDDYFIFDCPGQIELYSHLPVMKSLCSALSDWGFAICGVYLVGFFSYIRGLMPRQIDSLFISDPSKFISGVLCSLSAMVQLELPHVNVLTKCDLADEQEIEKYLDPSSGYLLES-----------------------------------------------------LTQATNDKWQP--------------------------LSRAVCNVINDYSMVAFVPMNITDEDSMEVVLQHIDHAINYGEDMEPKEPKDE 274
[Close]
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Match: A0A6U3ZEP1_9STRA (GPN-loop GTPase 3 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZEP1_9STRA)

HSP 1 Score: 301 bits (770), Expect = 1.140e-97
Identity = 165/341 (48.39%), Postives = 220/341 (64.52%), Query Frame = 1 
Query:   55 QMVMGPAGTGKSTYCKIMQEHCQNA----KRTVHVVNLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMDWLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNY--NVCAVFLLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFLDTENAALISMHYPQAQRGVHFGTAPFNRGEREGGDEDEEENVMDDEGLGRGAGGEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLARLTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQPKDD 1059
            Q+V GPAG+GKSTYC  +QEHC+      +R VHV NLDPAAE F+Y+VAFDIRDLIS++D MEEL LGPNG L+YCMEYLL+N+DWL+DELD FDDDEY+I DCPGQ+ELY+H+PVMR V+DQ++ W Y  ++ +VF++DATF+ D  KF+SG+LLSLSAM+ +ELPH+NVL+KCDL +   V+R LD  +A        +      +G++    G+   G +D+ + +  +E                     Q  EL+ + R                      RLTEAI  +LDDYTMV+FLPL+I DE+ I  VL   D+ VQYGED+E +  + D
Sbjct:    7 QIVTGPAGSGKSTYCHAIQEHCRTLGKMRRRNVHVANLDPAAENFKYDVAFDIRDLISVDDVMEELGLGPNGSLIYCMEYLLENLDWLQDELDNFDDDEYLILDCPGQIELYTHIPVMRRVIDQMRMWGYESSMMSVFVVDATFVCDAPKFISGSLLSLSAMIAMELPHVNVLSKCDLVEEERVDRILDVGSAT-------ELWNIEEYGSSVAIVGDEMAGKKDDGDEISKEE--------------------RQLIELRRKKRN---------------------RLTEAICTLLDDYTMVSFLPLNITDEDSIDHVLSVVDHTVQYGEDIECRGAEQD 299
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig103.303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2Q3_9PHAE1.950e-22291.93GPN-loop GTPase 3 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YPS9_9STRA1.160e-12656.34GPN-loop GTPase 3 n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2XYS1_9STRA6.380e-11453.61GPN-loop GTPase 3 n=1 Tax=Fibrocapsa japonica TaxI... [more]
A0A024U8U1_9STRA2.820e-10248.07GPN-loop GTPase 3 n=7 Tax=Aphanomyces TaxID=100860... [more]
A0A6U0IL03_9STRA1.070e-10150.73GPN-loop GTPase 3 n=1 Tax=Minutocellus polymorphus... [more]
A0A1E7FU52_9STRA1.260e-9949.28GPN-loop GTPase 3 n=1 Tax=Fragilariopsis cylindrus... [more]
A0A448YVL8_9STRA6.150e-9950.15GPN-loop GTPase 3 n=1 Tax=Pseudo-nitzschia multist... [more]
A0A7S2RLE6_9STRA2.680e-9849.12GPN-loop GTPase 3 n=1 Tax=Eucampia antarctica TaxI... [more]
A0A1V9ZAW3_9STRA2.770e-9844.60GPN-loop GTPase 3 n=2 Tax=Saprolegniaceae TaxID=47... [more]
A0A6U3ZEP1_9STRA1.140e-9748.39GPN-loop GTPase 3 n=2 Tax=Ditylum brightwellii Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig103contigEcto-sp13_S_contig103:10991..15582 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score608.2
Seed ortholog evalue2.4e-171
Seed eggNOG ortholog2880.D7FQU7
Preferred nameGPN3
Model size1064
KEGG koko:K06883,ko:K12486
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000122,GO:0000212,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000779,GO:0000780,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000792,GO:0000793,GO:0000794,GO:0000819,GO:0002064,GO:0003006,GO:0003674,GO:0003682,GO:0003824,GO:0003924,GO:0004497,GO:0005048,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006355,GO:0006357,GO:0006606,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0007062,GO:0007063,GO:0007064,GO:0007088,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007548,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008406,GO:0008584,GO:0009058,GO:0009059,GO:0009653,GO:0009791,GO:0009886,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010571,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010948,GO:0015031,GO:0015616,GO:0015833,GO:0016020,GO:0016043,GO:0016462,GO:0016491,GO:0016604,GO:0016605,GO:0016705,GO:0016709,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017038,GO:0017111,GO:0019219,GO:0019222,GO:0019748,GO:0019904,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030330,GO:0030855,GO:0030900,GO:0031056,GO:0031060,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031497,GO:0031618,GO:0031933,GO:0031974,GO:0031981,GO:0032204,GO:0032206,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033218,GO:0033262,GO:0033365,GO:0033554,GO:0034091,GO:0034092,GO:0034182,GO:0034183,GO:0034502,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034724,GO:0034728,GO:0035064,GO:0035107,GO:0035108,GO:0035120,GO:0035127,GO:0035128,GO:0035136,GO:0035264,GO:0035295,GO:0035556,GO:0035690,GO:0040007,GO:0042221,GO:0042277,GO:0042393,GO:0042493,GO:0042623,GO:0042770,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044550,GO:0044703,GO:0045005,GO:0045137,GO:0045184,GO:0045740,GO:0045786,GO:0045787,GO:0045839,GO:0045875,GO:0045892,GO:0045893,GO:0045930,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046546,GO:0046661,GO:0046907,GO:0048232,GO:0048285,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048608,GO:0048609,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051128,GO:0051129,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051321,GO:0051570,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0055114,GO:0060008,GO:0060009,GO:0060173,GO:0060255,GO:0060322,GO:0060429,GO:0061458,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070087,GO:0070192,GO:0070198,GO:0070727,GO:0070887,GO:0071103,GO:0071241,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0072331,GO:0072520,GO:0072594,GO:0072710,GO:0072711,GO:0080090,GO:0090068,GO:0090304,GO:0090329,GO:0097327,GO:0097329,GO:0098687,GO:0098813,GO:0140014,GO:0140030,GO:0140034,GO:0140097,GO:1900112,GO:1901360,GO:1901576,GO:1901580,GO:1901581,GO:1901582,GO:1901698,GO:1901699,GO:1902275,GO:1902679,GO:1902680,GO:1903046,GO:1903047,GO:1903506,GO:1903507,GO:1903508,GO:1904907,GO:1904908,GO:1990421,GO:1990707,GO:2000105,GO:2000112,GO:2000113,GO:2001141,GO:2001251,GO:2001252
Exons8
EggNOG free text desc.GTP binding
EggNOG OGsKOG1534@1,KOG1534@2759
Ec32 ortholog descriptionGPN-loop GTPase
Ec32 orthologEc-16_000820.1
Cds size1062
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig103.303.1prot_Ecto-sp13_S_contig103.303.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig103 10991..15582 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462521.4692276-CDS-Ecto-sp13_S_contig103:10990..110471681462521.4692276-CDS-Ecto-sp13_S_contig103:10990..11047Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 10991..11047 +
1681462521.4830194-CDS-Ecto-sp13_S_contig103:12246..123941681462521.4830194-CDS-Ecto-sp13_S_contig103:12246..12394Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 12247..12394 +
1681462521.5014439-CDS-Ecto-sp13_S_contig103:12924..130851681462521.5014439-CDS-Ecto-sp13_S_contig103:12924..13085Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 12925..13085 +
1681462521.5122566-CDS-Ecto-sp13_S_contig103:13615..136691681462521.5122566-CDS-Ecto-sp13_S_contig103:13615..13669Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 13616..13669 +
1681462521.522917-CDS-Ecto-sp13_S_contig103:13828..139931681462521.522917-CDS-Ecto-sp13_S_contig103:13828..13993Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 13829..13993 +
1681462521.5391886-CDS-Ecto-sp13_S_contig103:14327..145531681462521.5391886-CDS-Ecto-sp13_S_contig103:14327..14553Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 14328..14553 +
1681462521.5501554-CDS-Ecto-sp13_S_contig103:15004..151351681462521.5501554-CDS-Ecto-sp13_S_contig103:15004..15135Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 15005..15135 +
1681462521.558631-CDS-Ecto-sp13_S_contig103:15462..155821681462521.558631-CDS-Ecto-sp13_S_contig103:15462..15582Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 15463..15582 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig103.303.1

>prot_Ecto-sp13_S_contig103.303.1 ID=prot_Ecto-sp13_S_contig103.303.1|Name=mRNA_Ecto-sp13_S_contig103.303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=354bp
PNKYLARAFGCGAMGKCCQMVMGPAGTGKSTYCKIMQEHCQNAKRTVHVV
NLDPAAETFEYEVAFDIRDLISLEDAMEELELGPNGGLVYCMEYLLDNMD
WLKDELDKFDDDEYIIFDCPGQVELYSHVPVMRNVLDQLKSWNYNVCAVF
LLDATFITDPAKFMSGALLSLSAMVQLELPHLNVLTKCDLADRSEVERFL
DTENAALISMHYPQAQRGVHFGTAPFNRGEREGGDEDEEENVMDDEGLGR
GAGGEESADVGTGATTAQREELQPRGRLQGLGAQRGMEGAQRGPLPRLAR
LTEAISGVLDDYTMVNFLPLDIRDEEDIALVLHHADYIVQYGEDLEPKQP
KDDV
back to top

mRNA from alignment at Ecto-sp13_S_contig103:10991..15582+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig103.303.1 ID=mRNA_Ecto-sp13_S_contig103.303.1|Name=mRNA_Ecto-sp13_S_contig103.303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4592bp|location=Sequence derived from alignment at Ecto-sp13_S_contig103:10991..15582+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCCAACAAATATCTCGCGAGGGCCTTTGGGTGCGGTGCCATGGGAAAGTG
TTGCCAGGTGCGTAAGAAGATAACTGCATGCCCCCACTCTTTTCATATTG
ACCTATTCGCTAGTTGTGCTGAATTTGTGCGGTGGTGAGAAGTTGGGGGA
GGGAGGTGGTCCTCAACTTGGAGATTTAGGAGATCGAGGAATCGAGAACC
TTCCTATGCTCCCTGACGGTAGCGTCCGCGGGAAGGTCGGCAATTATGCG
ATCCGATTTCACGACGCCTTGCTGGCTCTACCACAATCACATACATAATG
GCACACACAACGGAAGTTTGATCTGCCACACCTCCGCCACACACTGCAGT
AGCCTGAATGGAGTATACAGCGATGCAGCCGGGCAGCCAGCAACCCGGAT
CTGACAGTCCCGAGCGACGTGTGAAATGGTATGTTGGGTTCCAAAGCGTG
CACGCCTTAGTGTTTTAGTGTTTAGAGGTGATTAAAGTGGCAACATAGGT
CTGCGGGCGAGGTGCAAAGATTGGTGCACCCAGTAGGCGTCAATCTGGAC
CGAAAGAAAATGCATCATTGCAACCTTTTACCCTTTACCTGATGAGCGTG
TTCTGCTGTAGCCTTCAATTTTAATTTTTCAAATTTCACGAGTGAGGGCT
GACCGCGGAGCCGCCGTTCCTCGCGTATATACTTTCGAGCTTTCGAGTAC
TACAGCAGCATTCATGGAGGTGTTGTTCTTTGGATGGGCTTATCCACTAG
ACCACACAATCAGCGCTAACGTATTGGCTCCATCCAACGAACAGGAGCAC
CCCTCATGCGAAATCCTTACTCTACACCTAAGTTCTCCCTGCCAGAGAGT
GGGCTCATGAGAGCACAGCAGTGTCATCAAAGGTGTGATGCAGAGGAAAA
TCAAGCAGGCGGTAGGACAACCCACAGCTGACATGTTTTTGACTCGAACA
GCCCAGCGAGCCCTAACGAACCGAGGAGAAAGCTACTAAGCTGTCTACAA
CAGTCTTCATACTTCAGCACGTGTCTCCTGTACCACATCAATCCCGAACC
CACGATGAGAGTCGCGGCAGAAGGCAGTTGTTTTAGGGTGGGCTAATGAA
CGAAGCTCCAAACATGCAGCCTCACGTGTTTATGGCACACACTGCTGTTG
GGTTTGTGTTCATCGGCCGACTTCCACCACGGTGTCCGAGGTCCAGACAA
GGAGGCAACCCCCTTGTCCCTTTTGTTCCCTTGACTTCCCTTGAAAACAA
ACCCAGATGGTAATGGGGCCGGCGGGCACCGGCAAGTCGACGTACTGCAA
GATCATGCAGGAGCACTGCCAAAACGCCAAGAGGACGGTACACGTGGTCA
ACCTCGACCCTGCCGCGGAGACCTTCGAGTACGAAGTCGCCTTCGATATC
AGGGGTGGGTGACGTTGCGAGGAGTGCTGATCATTACGGCTGTCGATTTA
CTACAATAAATTTGTTCGGAGCGGGCTTGAAAATGTAAGATTGGTTAAAT
CGTTGTACCAGTGTCCTGCAATAAGCCCTACCTCGGTGGCATTTTTAATG
GTAGCCAGGTCCAACTATGATTCGACGGTTGACGACTACAAGCCGCTGCT
GGGTCAACGTGCTAAACATGTGTTTTATACGTCGTATCATGGTGCACCAG
GTATAATATGTAGTCCTGTACCTCCGTGGCATTGAGAGGTGTTAGTGTGT
GGCACCAAGCTAGATCAGCTGGATGTGGACAGCAGTGGTGTTTGTTCGTA
GAGTGCAACCGTATGCATGGCAATCCTCACAGCCGACCCTCAACCGTCGA
GTGCACACCTTGGATCTCTTTGAGGTCGCGTGAAACAGTAGTGCGCCTTG
CGGCCAGTGAACCTTCCGAAGCCTGTGGCCGCTTTATGGAACGACCTATA
TGTCTTGGAATGCCTGGCGCTGCGATTTTTGCAGACCTGATATCTCTTGA
AGACGCCATGGAAGAGCTGGAATTAGGTCCGAATGGGGGGCTGGTCTACT
GCATGGAGTACCTCTTGGACAATATGGACTGGCTCAAGGACGAGCTGGAT
AAGTTTGATGATGACGAATACATCATCTTCGACTGCCCCGGCCAGGTGAT
CACCTTCCTCCATCCCAGTGGAGCGTTTCCCTGTAGCGTGAGGCAGAACT
GCTGTTTCGTGTCACTTCAAGGTCCGATAGATGCGTTCTTGGAGGCACTT
GTTGCTGCGTTGCGTGTTGATTCGTGTCCGCCACTCTGCTATGTTCACCG
CGATTCCATGGGAAACGGTTGGGCGCAATTTTTTGGTTGCACCACTAGGT
GTGTCGATCCGGAAGGCAAGGCTGCACTATTGTAAGGCACACCTCGTTGA
GCTAGAGCGCGTCTATGCAATGGGCTGTGCCCCGTCGTAGCCGTGCATCC
AGCGCCGCCCGTCTCGGGGAAGTCTGTAATACCTCGTGACTCTCCGCGTC
TCTCTGTCTGTCTCTATCTGTCTGTGCCTTTCTGTCTGTCTGTCTGTCTG
TCTCACTCTCTCTCTGCCTCTCTCCCTCTCTGCCTCTCTCCCTCTCTGCC
TCTCTCCCTCTCTGCCTCTCTCCCTCCACCTCTGCTCTCTGTTTCTCTTC
TCTCTCTGTTTGTGTCATCCCCAAGGTGGAGCTGTACAGCCACGTCCCGG
TTATGCGCAATGTCTTGGACCAGCTCAAGGTAAGGCTGCGCAGCGAGGGC
GATAGCTCGGTTTGGTTTGCCAAGAACATTCTTCATGGGTACAGGTGCCG
AACTCCCCCCTACACCATCGCTGCCTACGGCTAACAGCAGCGTTCTGGAC
CTGCCCGTCCCCTGGCGCTTGTCGTAACTTGCTGGCAGTCTTGGAATTAC
AACGTTTGCGCGGTGTTTCTGCTTGATGCCACGTTCATCACCGACCCTGC
CAAGTTCATGAGCGGGGCACTGTTGAGCCTCAGCGCGATGGTGCAGCTCG
AGTTGCCGCACTTAAACGTGCTCACCAAGTGTGATCTAGCGGACCGAAGC
GAGGTGAGGCCGACACGGCGAAAACTTAGGGAGTTCACCGGGGCTACATT
CGCTCTGTCCGCATTCCGGTGCCGCTGCTTGTCCATACCTCCTGGTTTTT
TTTCATGGAGTGCGTGCTTGCTCCCTGTAACTCACCGCAGACATTTTTCG
GTCCTCGTCTTGCTGGCCATCCGAAGTATTTTCGGGGTGCTTCTGAGGTG
ACACGGGCTAGCTAGTCTTTGGTCCATTCGCGCCATGACCGACGTGCGGC
CATGTCGTTTCACACCTCTATCCTATCCTTTCTAGTGCCATGTCTGAACA
TGCGAGTCCTGCCGTGCGGCACTTGCGCTCTGTCTAGGTGGAGCGGTTCT
TAGACACGGAAAACGCCGCGTTGATCTCGATGCACTATCCACAAGCACAA
CGGGGGGTACACTTCGGGACGGCACCATTCAACAGGGGGGAGAGGGAGGG
GGGGGACGAGGACGAGGAGGAGAACGTTATGGACGACGAGGGGTTGGGTC
GAGGGGCGGGCGGCGAAGAATCCGCGGACGTGGGGACTGGAGCGACCACG
GCACAAAGAGAAGGTGAGGGAGGGGAGCAGGCGTTGGGGGGTATGCTGTG
GTATGTGATTGTGTCCACGGAAACGAACACAACAAACCGACATGCTCGTA
CGTGTCCTTGCGTACCGCATATGACACAAGACAACATACTCCCTGGACCA
TTTTGTCTTAGCTTGATTCACCATGACGAAGAGGATGCATAAATGAAACA
ATAAATTTTCGGAAAGCGCTCGACGAGAAGCTTCCACACTTTTCGGCGCT
GTGAGTCTTTCTGTTGTTGAGAAATCGAGATTTGAAAATCGGTCCAGGGG
GTGTGTTGTCGTGTGTCATTTACGGTAGCTACTGCCGAAATTTACAAGAA
TCTGTCCTCCTACTTGTCACGCGTAAAATGCGCTGACCTAGGCTAGTAGC
ATTGACATCCTGCGTGTGCCACTGCCCTGTCACTCCCCTTATCAACATCG
CATCCTCGTGACAGAGTTGCAACCACGGGGCAGATTACAAGGATTGGGGG
CGCAGAGAGGCATGGAAGGGGCTCAAAGAGGGCCACTGCCGAGATTGGCG
CGACTAACGGAGGCTATCTCGGGCGTCCTGGACGACTACACAATGGTGCG
TGGTGTGTGGACCGTCACCTTCTAGAAGCGCGCCGTACTCGTGAGGGTGT
CGTGTCGGTCGACTACACGGGTGAAACGAAGAAATGCGTTCCTCTGGTCG
TATGCGTACCCTTGAGTTAGACATGGTTCCTCATCGGTGTTGCGACCGAT
TTCGTCCTCGCCAGATTTAACATGATGTGGGGTCCAAGTTGGGGTCGCGT
GGGTGTGCCTCTCCAAGTTCGGCTGTGTCGTGGGTTCAAGCTAGTCACGT
GGCACTATTTTTTGTCGGCACGCCTCTAACATGTCTCGAACTCCCACTGT
TTGGTCGGGTGAAATCTCGAAGGTAAACTTTTTGCCGCTGGATATTCGAG
ACGAGGAGGACATCGCCCTAGTGCTGCACCACGCCGACTACATAGTGCAG
TACGGGGAGGATCTGGAGCCTAAGCAGCCCAAGGACGATGTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig103:10991..15582+

>mRNA_Ecto-sp13_S_contig103.303.1 ID=mRNA_Ecto-sp13_S_contig103.303.1|Name=mRNA_Ecto-sp13_S_contig103.303.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1062bp|location=Sequence derived from alignment at Ecto-sp13_S_contig103:10991..15582+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCCAACAAATATCTCGCGAGGGCCTTTGGGTGCGGTGCCATGGGAAAGTG
TTGCCAGATGGTAATGGGGCCGGCGGGCACCGGCAAGTCGACGTACTGCA
AGATCATGCAGGAGCACTGCCAAAACGCCAAGAGGACGGTACACGTGGTC
AACCTCGACCCTGCCGCGGAGACCTTCGAGTACGAAGTCGCCTTCGATAT
CAGGGACCTGATATCTCTTGAAGACGCCATGGAAGAGCTGGAATTAGGTC
CGAATGGGGGGCTGGTCTACTGCATGGAGTACCTCTTGGACAATATGGAC
TGGCTCAAGGACGAGCTGGATAAGTTTGATGATGACGAATACATCATCTT
CGACTGCCCCGGCCAGGTGGAGCTGTACAGCCACGTCCCGGTTATGCGCA
ATGTCTTGGACCAGCTCAAGTCTTGGAATTACAACGTTTGCGCGGTGTTT
CTGCTTGATGCCACGTTCATCACCGACCCTGCCAAGTTCATGAGCGGGGC
ACTGTTGAGCCTCAGCGCGATGGTGCAGCTCGAGTTGCCGCACTTAAACG
TGCTCACCAAGTGTGATCTAGCGGACCGAAGCGAGGTGGAGCGGTTCTTA
GACACGGAAAACGCCGCGTTGATCTCGATGCACTATCCACAAGCACAACG
GGGGGTACACTTCGGGACGGCACCATTCAACAGGGGGGAGAGGGAGGGGG
GGGACGAGGACGAGGAGGAGAACGTTATGGACGACGAGGGGTTGGGTCGA
GGGGCGGGCGGCGAAGAATCCGCGGACGTGGGGACTGGAGCGACCACGGC
ACAAAGAGAAGAGTTGCAACCACGGGGCAGATTACAAGGATTGGGGGCGC
AGAGAGGCATGGAAGGGGCTCAAAGAGGGCCACTGCCGAGATTGGCGCGA
CTAACGGAGGCTATCTCGGGCGTCCTGGACGACTACACAATGGTAAACTT
TTTGCCGCTGGATATTCGAGACGAGGAGGACATCGCCCTAGTGCTGCACC
ACGCCGACTACATAGTGCAGTACGGGGAGGATCTGGAGCCTAAGCAGCCC
AAGGACGATGTG
back to top