prot_Ecto-sp13_S_contig13864.3021.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13864.3021.1
Unique Nameprot_Ecto-sp13_S_contig13864.3021.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length372
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13864.3021.1 vs. uniprot
Match: A0A6H5KHA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA7_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 2.820e-52
Identity = 89/123 (72.36%), Postives = 96/123 (78.05%), Query Frame = 0 
Query:   76 MACSDGDSFTIDSDVTYETSQSFNGCYYASVDTFNDETHYFLDGDEVGGTPGVYSSAELHDD---HGVWALAYYTTDGEFSRRCKDAAEEDSSTLHPADVLQWDCKDADEPDSVLYTDIDAAV 195
            MACSDGDSFTIDSDVTYE S SF+GCY AS DTFN ET YFLDGDE  G PG+YSS    DD   HG W L YYTTDGEF RRCKDA EEDSSTLHPA+V+QWDCK+  + D  +Y DIDAAV
Sbjct:    1 MACSDGDSFTIDSDVTYEDSLSFDGCYEASADTFNSETMYFLDGDEFIGYPGIYSSNNFDDDGDEHGTWVLGYYTTDGEFFRRCKDADEEDSSTLHPAEVVQWDCKEYGDTDEDVYLDIDAAV 123
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BLAST of mRNA_Ecto-sp13_S_contig13864.3021.1 vs. uniprot
Match: D7G7I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I5_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.010e-15
Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 0 
Query:   90 VTYETSQSFNGCYYASVDTFNDETHYFLDGDEVGGTPGVYSSAELHDDHGVWALA-YYTTDGE-----FSRRCKDAAEEDSSTLHPADVLQWDCKDADEPDSVLYTDIDAAVTITCGC 201
            V  + + + +GCY  +  + ND   YFLDG E GG+  VY+S+   DDH VW +A  Y  D E      S  CKDA E+D++TLHP +V+QW+C    + D   YT +D  + ITC C
Sbjct:   10 VEVDYNSAVDGCYEDTTTSVNDLDGYFLDGVEAGGSSIVYASSSFRDDHFVWVVANVYDIDVEEGIFDVSITCKDAYEDDATTLHPVEVIQWNCYSTADED---YTRLDE-IEITCSC 123
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13864.3021.1 vs. uniprot
Match: A0A6H5K4G7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G7_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.210e-9
Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 0 
Query:   83 SFTIDSDVTYETSQSFNGCYYASVDTFNDETHYFLDGDEVGGTPG-VYSSAELHD---DHGVWALAYYTTDGEFSRRCKDAAEEDSSTLHPADVLQWDCKDADEPDSVLYTDIDAAVTITCGC 201
            SF ++ D T E     +GCY  +  + ND   YFLDG E GG+   V+  A ++D   + G++  A  TT       CKDA EED++TLHP +V+QW+C    + D   YT +D  + ITC C
Sbjct:    7 SFYLNIDYTSEV----DGCYEDTTTSINDLDGYFLDGVEAGGSSVFVWVVANVYDMDVEEGIFDAA--TT-------CKDAYEEDATTLHPVEVIQWNCYSTADED---YTRLDE-IEITCSC 112
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13864.3021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KHA7_9PHAE2.820e-5272.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7I5_ECTSI1.010e-1541.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4G7_9PHAE1.210e-939.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 290..313
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 314..371
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..289
NoneNo IPR availableTMHMMTMhelixcoord: 291..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13864contigEcto-sp13_S_contig13864:1748..3642 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13864.3021.1mRNA_Ecto-sp13_S_contig13864.3021.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13864 1005..4407 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13864.3021.1 ID=prot_Ecto-sp13_S_contig13864.3021.1|Name=mRNA_Ecto-sp13_S_contig13864.3021.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=372bp
MSLHPRRLLYARLPLVGVDRVVYQAIDQDQGLDQEQSSHHAIESLLADFG
LRRPYYLLLRAVTVVPREIHRRRSDMACSDGDSFTIDSDVTYETSQSFNG
CYYASVDTFNDETHYFLDGDEVGGTPGVYSSAELHDDHGVWALAYYTTDG
EFSRRCKDAAEEDSSTLHPADVLQWDCKDADEPDSVLYTDIDAAVTITCG
CDSPTPAPTTSETPAPAPSPAPSPAPSPAPSPAPSPTPSPTSPSRATPST
PSPAALSPTTPSPTTPSTALPASVSPELMAETSSAEATPVGAIAGGAVAG
VLAVGAIILAVLFKSGRSKTCRGGSRDTPADDVIAPASASGSVPTQGTRV
ETTAAHTARQYPVAHQYPAAT*
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