mRNA_Ecto-sp13_S_contig103.302.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig103.302.1
Unique NamemRNA_Ecto-sp13_S_contig103.302.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A6H5JYC7_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC7_9PHAE)

HSP 1 Score: 632 bits (1630), Expect = 2.970e-226
Identity = 314/329 (95.44%), Postives = 322/329 (97.87%), Query Frame = 1
Query:   58 MGLRVIEPRVGVTLTVMSLALLCMLRRVAAFRSGSIAALSRTMCKQRGQTARGDCATAGRHAGPEGTELPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKKEAGSD 1044
            MG+RVIEPRVGVTLTVMSLALLCMLRR  AFRSGSIAALSRT+CKQRGQTARGDCA AGRHAGPEGT+LPG+MHRTV AEELKAEVIVVGDIHGCY EMVSLLERCGYRLGN+EDRERFSVVLAGDLVNKGPGSV+VVRTAR+EGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPS GCIIVHAGLVPGVPLNGQDAEAMSCMRNVVE+EGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKK AGSD
Sbjct:    1 MGVRVIEPRVGVTLTVMSLALLCMLRRGVAFRSGSIAALSRTLCKQRGQTARGDCAAAGRHAGPEGTDLPGVMHRTVSAEELKAEVIVVGDIHGCYGEMVSLLERCGYRLGNKEDRERFSVVLAGDLVNKGPGSVDVVRTAREEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSLGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEMEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKK-AGSD 328          
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: D7FQU8_ECTSI (Putative bis(5\'-nucleosyl)-tetraphosphatase, symmetrical n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQU8_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 1.800e-65
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 1
Query:  742 MSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKKEAGSD 1044
            MSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKK+AGSD
Sbjct:    1 MSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKKKAGSD 101          
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A8K1FHR1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHR1_PYTOL)

HSP 1 Score: 204 bits (520), Expect = 2.110e-59
Identity = 119/255 (46.67%), Postives = 157/255 (61.57%), Query Frame = 1
Query:  262 LPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPW--VEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGG----GYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAP 1008
            LP  MH  V    L + VI+VGDIHGC+ E+V LL         E D  + +++L GDLVNKGP S  VV+ ARQ+  L VRGNHD+ AL+A      ++ K G G  A P  +  V+  S +D++++  LP+T+S P+   +IVHAG+ PGV L GQ    M  MR  +E E        +E +    + + WA  WKGP+H+YFGHDAK G Q+EAFATGLDTGC YGR LTA++LP R +V V A A +SAP
Sbjct:   15 LPSRMH-LVADIPLTSRVIIVGDIHGCFDELVELLAVA------EFDESKDTLILVGDLVNKGPKSPEVVQFARQKNALCVRGNHDDAALSAY-----YAWKSG-GDDALPAKYGYVKSFSEEDIRYLEELPFTISLPAQNAMIVHAGIKPGVALEGQHPIDMYKMR-FLEYESTNEEPAAFEVKPSDSEVVQWATQWKGPQHIYFGHDAKAGLQQEAFATGLDTGCCYGRQLTAIILPTRELVAVKARAQYSAP 255          
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A4D9DA84_9STRA (Metallophos domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA84_9STRA)

HSP 1 Score: 200 bits (508), Expect = 2.230e-56
Identity = 121/276 (43.84%), Postives = 154/276 (55.80%), Query Frame = 1
Query:  247 PEGTELPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGG-----GYEPRTLPDQGLA--WAKAW--KGPE-----------HVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGG 1014
            P GT +P  +HR +  +E K  V+VVGD+HGC  E+ +LL +  Y    +      SVVL GDLVNKGP S   V+  R +GF +VRGNHD+ ALAA   VG+F+   G     +   +V  L   D+ W+ +LPYTLS    G ++VHAGL+PG PL  Q A  MS +R+V   E GG     G E   +P+ G A  WAK W  +G E           H+ FGHDAKRG Q    ATGLDTGC YGR LT  +LPG   + V A   +  P G
Sbjct:   90 PAGTRMPACVHRILTRDEAKERVLVVGDVHGCLEELQALLVKANYTAAKD------SVVLVGDLVNKGPLSAETVKWCRTQGFYSVRGNHDDSALAAYFRVGKFT---GVSSLPQAYDFVAALDEADVAWLDSLPYTLSIEHLGVVVVHAGLLPGRPLQMQQAADMSRIRSVKRAEEGGEGTWVGVE--YIPENGEAEPWAKVWSQEGKECEGGEGSTDARHLLFGHDAKRGLQVFRKATGLDTGCCYGRELTLAILPGEERISVKALKAYQVPHG 354          
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A813JGW0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JGW0_POLGL)

HSP 1 Score: 197 bits (502), Expect = 3.030e-56
Identity = 115/264 (43.56%), Postives = 152/264 (57.58%), Query Frame = 1
Query:  247 PEGTELPGIMHRTVGAEEL----KAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLPDQG-LAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVL-----PGRRVVCVPAEAMWSAP 1008
            P GT LP I HR V   E+       +++VGD+HGC  E+ SLL+   +      D+ R ++VL GDLVNKGP S  V+  AR  G   VRGNH++  L A  GVGR++     G G+       Q+ ++ ++W+  LP+TLS P    ++VHAGL+PGVPL  Q  + M  +R+V   +   G+E    P +G  +WAK W GPEHV FGHDAKR  Q   FATGLDTGC YG  LTA+V+       RR V   A  + SAP
Sbjct:   29 PSGTPLPLISHRRVERHEVCNQPGGRLLIVGDVHGCAEELRSLLKAESF------DKGRDTLVLVGDLVNKGPSSGEVIAIARDNGAFCVRGNHEDELLEAWHGVGRYA----NGLGSYRQNAKGQVDAEAVRWVQELPFTLSLPWLKLVVVHAGLIPGVPLEKQKVKDMMWVRDVRPSDSDAGWEGLETPQEGSYSWAKVWSGPEHVVFGHDAKRKLQTHEFATGLDTGCCYGFQLTALVVNPDDASDRRFVHAQAGKVHSAP 282          
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A5D6Y7R9_9STRA (Metallophos domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7R9_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.900e-56
Identity = 121/277 (43.68%), Postives = 156/277 (56.32%), Query Frame = 1
Query:  262 LPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAA----ATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGY-EP----RTLPDQGLA--------WAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNGKKEAGS 1041
            LP ++HR V      A V+VVGD+H C  E+  LL  C +         R ++VL GDLVNKGP  V VVR AR+   L VRGNHD+ ALAA     TG G     + +        +VEQLS +D++++  LP+TL+ P+   I+VHAGLVPGVPL+ Q    M  MR +  ++  GG  EP      L  +  A        WA  W+GP+HV+FGHDA  G Q+EAFATGLDTGC YGR LTA +LP R +V V A   ++          AGS
Sbjct:   20 LPAVVHR-VAELPATARVVVVGDVHACADELQLLLRACAFNAA------RDTLVLVGDLVNKGPKPVEVVRFAREANALCVRGNHDDAALAAYYAWRTGGGARDASDSKYR------YVEQLSPEDVRFLEELPFTLTLPAQNAIVVHAGLVPGVPLHAQRPLDMYKMRFIEPVDQDGGIDEPVREWAALETRAAAREAGQLFQWATQWRGPQHVFFGHDAVPGLQREAFATGLDTGCCYGRQLTACILPAREIVQVQALRAYAPAANDGAVNTAGS 283          
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: R1ELE4_EMIHU (Metallophos domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ELE4_EMIHU)

HSP 1 Score: 195 bits (496), Expect = 1.950e-55
Identity = 120/276 (43.48%), Postives = 151/276 (54.71%), Query Frame = 1
Query:  223 ATAGRHAGPEGTELPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAA-----ATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWK-------GPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGG 1014
            A   R + P    +P   HR +   E  +  I+VGD+HGC  E+ SLL+ CG+      D     VVL GDLVNKGP S   V  AR+ GF  VRGNHD+ AL A       G      K  E   A    WV+ L   DL ++  LP+TL       ++VHAG+VPGVPL  Q AE M+ MRN+V  +GGG +   +    G+AWA+ W+       G  HV FGHDAKR  Q+   ATGLDTGC YG  LTA+VLP  R+V V A   ++ PGG
Sbjct:   27 AVPARRSPPRRCHVPPESHRVLVTRE-GSRTILVGDVHGCLDELKSLLQACGF------DASTDHVVLVGDLVNKGPHSAETVAYARESGFACVRGNHDDAALFAHEARTEAGARGSDSKYSELKYA----WVDALGEADLAFLRELPHTLRLEREEVLVVHAGVVPGVPLAEQRAEDMTTMRNLVRADGGGWWAAASA-SAGVAWAEEWRPEPTVVAGVRHVVFGHDAKRRLQRHEHATGLDTGCCYGGELTALVLPEWRLVAVDAGREYTVPGG 290          
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: UPI000719B5AA (serine/threonine-protein phosphatase 1-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719B5AA)

HSP 1 Score: 193 bits (490), Expect = 1.260e-54
Identity = 122/264 (46.21%), Postives = 151/264 (57.20%), Query Frame = 1
Query:  238 HAGPEGTELPGIMHRTVGAEELKAE-VIVVGDIHGCYSEMVSLLER-CGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGF--LAVRGNHDN------FALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRN-VVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLP---GRRVVCVPA 987
            H    G  LP ++H T+  E L+ + + VVGD+HGCY+E+ SLL   C       +D E   VVLAGDLVNKGP SV+V+R AR  G    AVRGNHD       F L A  G    SPK           WV +++  D  ++ ALPYTLS PS G +IVH GL+P  PL  Q    M+ MRN +V    G  + P    ++G+ WA  W GPEHV FGHDA+R  Q  A ATGLDTGCVYG  LTA++L    GR  V VP+
Sbjct:   18 HRTRSGIPLPPLLHATIPDEALRGKRLYVVGDVHGCYTELRSLLAAICA------DDDESVVVVLAGDLVNKGPRSVDVIRLARAYGTRCYAVRGNHDEAGLREWFRLRADAGY-LLSPKYA---------WVSEMTEADADYLLALPYTLSVPSRGTLIVHGGLIPRRPLADQSPADMTTMRNLIVRDHFGHAFAPTEHIERGVPWASLWPGPEHVLFGHDARRRLQTYAHATGLDTGCVYGGQLTALLLREDGGREYVQVPS 265          
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A8J5XRL1_DIALT (Metallophos domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XRL1_DIALT)

HSP 1 Score: 192 bits (488), Expect = 2.210e-54
Identity = 114/272 (41.91%), Postives = 149/272 (54.78%), Query Frame = 1
Query:  253 GTELPGIMHRTVGAEELKAEVIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPP---WVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLPDQGLA-----------WAKAWKGP-EHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPGGGNG 1023
            G  LP ++H        K  V++VGDIHGC  E++ LL+        E D     +VL GDLVNKGP S  VV  AR+ G L VRGNHD+ AL+A    G+++ +        PPP   +V  L++ D+ ++  LPYTL+ P  G ++VHAG+VPG PL  Q  + +  MRNV            + PD  L            WA  + G   HV FGHDAKRG Q+E FATGLDTGC YG  LTA++LP  R++  PA   +  PGGG G
Sbjct:   28 GVPLPRVVHAVHHLPPSKKRVLIVGDIHGCLHELLELLKAA------EFDAREDELVLVGDLVNKGPMSAQVVGWARERGVLCVRGNHDDAALSALRRSGKWASRA-------PPPSYEYVHDLTAADVAFLEQLPYTLALPDLGVLVVHAGVVPGRPLAEQHLQDLFKMRNVAPAT--------SAPDAPLVACERDVDGSKPWASTYGGELGHVVFGHDAKRGLQRETFATGLDTGCCYGGMLTALILPQHRLISSPALRTYEQPGGGKG 278          
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Match: A0A7S2XZH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZH9_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.570e-54
Identity = 111/242 (45.87%), Postives = 140/242 (57.85%), Query Frame = 1
Query:  313 VIVVGDIHGCYSEMVSLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQE-GFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCV----PAEAMWSAPGGGNG 1023
            VIV+GD+HG Y E+VSLL+ CG +       +   +V  GDLVNKGP  V  VR AR       V GNHD  A+ A      F   +  G   K   +VE L+ +D  W+  LPYT+S P    ++VHAGLVPGV L  Q+   M  MRN++  +    +E    P +G+AWA AW+GPEHVYFGHDAKRG Q+  FATGLDTGC  G  LTA +LPG  +V V    PAE   ++P    G
Sbjct:   20 VIVIGDVHGSYDELVSLLDACGRK-------DSDIIVFVGDLVNKGPKPVECVRFARSSPNAYCVMGNHDLKAIKA------FRSWKNGGKLKKKYKYVEDLTQEDYDWLYNLPYTISLPDRNALVVHAGLVPGVSLEDQNLVEMVTMRNLLRSDDNS-WEALERPTEGVAWASAWEGPEHVYFGHDAKRGLQQWRFATGLDTGCCKGLHLTACILPGAEIVSVAAMTPAEDRATSPSSSTG 247          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig103.302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYC7_9PHAE2.970e-22695.44Metallophos domain-containing protein n=1 Tax=Ecto... [more]
D7FQU8_ECTSI1.800e-6599.01Putative bis(5\'-nucleosyl)-tetraphosphatase, symm... [more]
A0A8K1FHR1_PYTOL2.110e-5946.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9DA84_9STRA2.230e-5643.84Metallophos domain-containing protein n=2 Tax=Mono... [more]
A0A813JGW0_POLGL3.030e-5643.56Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A5D6Y7R9_9STRA3.900e-5643.68Metallophos domain-containing protein n=1 Tax=Pyth... [more]
R1ELE4_EMIHU1.950e-5543.48Metallophos domain-containing protein n=1 Tax=Emil... [more]
UPI000719B5AA1.260e-5446.21serine/threonine-protein phosphatase 1-like n=1 Ta... [more]
A0A8J5XRL1_DIALT2.210e-5441.91Metallophos domain-containing protein n=1 Tax=Diac... [more]
A0A7S2XZH9_9STRA4.570e-5445.87Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig103contigEcto-sp13_S_contig103:250..3448 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score196.1
Seed ortholog evalue2.7e-47
Seed eggNOG ortholog2903.EOD21704
Model size1392
KEGG rclassRC00002
KEGG koko:K01525,ko:K22132
KEGG ReactionR00125
KEGG Pathwayko00230,map00230
Hectar predicted targeting categorysignal peptide
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031090,GO:0042578,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805,GO:0098852
Exons4
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG0639@1,KOG0371@2759
Ec32 ortholog descriptionMetallo-dependent phosphatase-like
Ec32 orthologEc-16_000830.1
EC3.6.1.41
Cds size990
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig103.302.1prot_Ecto-sp13_S_contig103.302.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig103 307..3103 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462521.3820329-UTR-Ecto-sp13_S_contig103:249..3061681462521.3820329-UTR-Ecto-sp13_S_contig103:249..306Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig103 250..306 +
1681462521.4362211-UTR-Ecto-sp13_S_contig103:3103..34481681462521.4362211-UTR-Ecto-sp13_S_contig103:3103..3448Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig103 3104..3448 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462521.3960774-CDS-Ecto-sp13_S_contig103:306..5551681462521.3960774-CDS-Ecto-sp13_S_contig103:306..555Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 307..555 +
1681462521.4050317-CDS-Ecto-sp13_S_contig103:1146..14601681462521.4050317-CDS-Ecto-sp13_S_contig103:1146..1460Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 1147..1460 +
1681462521.4141815-CDS-Ecto-sp13_S_contig103:2341..25351681462521.4141815-CDS-Ecto-sp13_S_contig103:2341..2535Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 2342..2535 +
1681462521.425039-CDS-Ecto-sp13_S_contig103:2870..31031681462521.425039-CDS-Ecto-sp13_S_contig103:2870..3103Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig103 2871..3103 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig103.302.1

>prot_Ecto-sp13_S_contig103.302.1 ID=prot_Ecto-sp13_S_contig103.302.1|Name=mRNA_Ecto-sp13_S_contig103.302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=330bp
MGLRVIEPRVGVTLTVMSLALLCMLRRVAAFRSGSIAALSRTMCKQRGQT
ARGDCATAGRHAGPEGTELPGIMHRTVGAEELKAEVIVVGDIHGCYSEMV
SLLERCGYRLGNEEDRERFSVVLAGDLVNKGPGSVNVVRTARQEGFLAVR
GNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYT
LSFPSFGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEIEGGGGYEPRTLP
DQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVL
PGRRVVCVPAEAMWSAPGGGNGKKEAGSD*
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mRNA from alignment at Ecto-sp13_S_contig103:250..3448+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig103.302.1 ID=mRNA_Ecto-sp13_S_contig103.302.1|Name=mRNA_Ecto-sp13_S_contig103.302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3199bp|location=Sequence derived from alignment at Ecto-sp13_S_contig103:250..3448+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACAACTTCCGAACGATAGCTCGTAACGCACTCAGGTCTCTCGCTCTCTT CAATGGGATGGGCTTACGTGTGATCGAGCCTCGGGTCGGTGTCACCCTGA CCGTGATGTCGCTTGCGCTGTTGTGCATGCTGCGTCGAGTTGCTGCCTTC CGCAGCGGATCGATCGCTGCCCTGTCTCGGACCATGTGCAAACAGCGAGG TCAAACGGCAAGGGGTGACTGTGCTACTGCAGGCCGACATGCCGGGCCTG AGGGAACCGAACTTCCGGGTATAATGCATAGGACGGTCGGCGCTGAAGAG CTGAAGGTACTCGTCGTTACGGACGAACGTTCGCTGTGTATGGCACCAAA AACCCCAATATCGAGCTCTTCCAACTCGGGTACACAGTTGTAGTCTACTA CTGTTGTCATTGTTGTTCTAAATGTAGCTGCAGGTGTGTTTGCCAATAAT GTGGTACCTTCCTTAGAGACCGACACATGTATGCAGTCTGGATGCGGATT TGTGATCGGCACCACCACTACAGCTGGGTATCGGTGCTCGGAGCGAAGCA TGTCTATGAGGAATGGTTGTGCGAGACTAATAGAGAGAGAGAGAGAAAAG GTGCGGACAAATTCCATTCCTGGTTGTATCGTTGTGTCCAATATCTTGTG CGTATACTGCATCGGCAGTTTCCCCATCCTGCTGTTTTGGTACGGTAGGC CGTCGACTGCTGCTTCGAACCATCCGCCAGTTCAAACGCATCCAAGAAGT ACGCTATACATGCATGTCAACAAAAGGCGAGTCCCGGACCAGTTCGTTTT ACCATACCCGTGCATCCCCCTACTTGGTGCCAACACAGCGGTCTGGTCGC CTTTGCCGCGTCTTTCGTGAACCCGTCTGATGGCCATTTAATTCTAGGCG GAAGTAATAGTGGTAGGAGACATCCATGGGTGCTATAGCGAGATGGTGTC GCTGCTGGAACGGTGCGGTTACCGGTTGGGCAACGAGGAGGACAGAGAGC GCTTCTCCGTTGTTCTGGCGGGGGATCTGGTCAACAAGGGGCCCGGGAGC GTGAACGTTGTGAGGACGGCGAGACAAGAGGGATTCTTGGCGGTTCGCGG CAACCACGACAACTTTGCCCTTGCAGCAGCCACTGGAGTCGGCAGGTTCT CCCCGAAAGAGGGAGAAGGCGGTGGTGCAAAACCCCCTCCATGGGTTGAG CAGCTGTCCAGGTATGCGCTGGTTTACCTTGGCTGCGCTTTTAAAGGGCA CAGAGGGGGGCGGGGGCGGGGGGGGTCTACTCATAGTCGTTCATGCCGTA GTCGTTAGAACATTGACCTCGCATCCCTACAAAGCCGAGACGGAGCACGC CGGGTTCTCACCGGACCAGGCTCTCACATCACCAAGCGCGAAGCGCCGGG AGGTATTCGGCGAGTCGCATAAAGGGTGCGCTGCATCCTGCTAAGGATGT TCGGCATCTTGTGCTTACTTCCTAGCGTACGGATGATAGCTGCGTATGAC TTACAATTCATTTTCTGGTGCTTTCACTTCCAGAGAAAGTTGTAAGCGCT GTGTAATTGCCTCGAGGGTGCTTGACCATTTTAACAAAACGTGCGAATAT CCCCTTTGCGCGGAGTGAGGGTTCTCCACCCCGCACAACATAATCTACGC GACCACCATTCATGGTTACTGTAACAAAAAAAACATAGGCAACAAAAAAA TCGGTACCCTGGTTGCTGAGCTCACGAAATGATCGGCTTGTTTCACAACG TCGCTGCCGAGCGACGAAAAGCCAACCTCGACGGCAAACACCGGGGGGAG CGGGTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCACCCCCAATG GCAAACAGCGGAACGGGGTGAAGAGGGGAGGGGCTAAAGGCTACTTTGGG GTGAGCAGGGAGAACCTTTGTCACAGGGAAATGCCTGCCCGTACCGCGCC GTAGTATCAGTTCGTAAAATAAGACGAGTAGCTGCTCAATTCATTTGTCC TGATTCTCGTCCCTCGACTCACCCTGTTTTTCCTCTTCCCCTCGTCCCCT CGCCCCAAAACCCGTGGTACTTCGCAACCTGTTTCTACCCAGCGATGATC TCCAGTGGATAAGCGCCCTACCCTACACGCTGAGCTTCCCTTCCTTCGGT TGCATCATTGTACACGCTGGTCTCGTGCCCGGAGTGCCTCTGAACGGCCA AGACGCAGAGGCAATGTCTTGCATGCGAAACGTTGTGGAGATAGAGGGTG GCGGGGGCTACGAGCCCCGTACTCTCCCAGACCAAGGTACGAGGGGCACT TTGACTTTCTCCCTGGTTGCGTGTTTAGAAACTGCAGAGATGAACCCTTC GCCCCCCCTCTCACGATACGTATTGGACCAGGCAATCCACCGGCTGGTGT CAGTTTTAGTTGAGTGGTCCCCGAGCAGTCTTGAAGGAGCTGCCAGCGGC GGGATATCATTCAGCATGTGATGGAGGTAGTTGAGGCCTGGGTGCCGGTG CAGGTCTATCCACATTCCAAGTTTCGCAAGATGCATATCTGCCCTCATGT TTTTATTTTTTGCCCGTGGACGACTCCGCGACCGCCTTCCCTCCGTATCT CTCGTGTTCGCTGTTACGAAGGTCTGGCCTGGGCCAAGGCCTGGAAGGGG CCGGAGCACGTGTACTTTGGACACGACGCGAAGCGAGGGTTTCAGAAAGA GGCGTTTGCCACCGGTCTAGACACCGGTTGCGTTTACGGGCGGTCGCTGA CGGCTGTCGTGTTGCCCGGGCGAAGGGTGGTGTGCGTCCCGGCGGAGGCC ATGTGGTCCGCCCCTGGTGGAGGAAATGGCAAGAAGGAGGCTGGCAGTGA CTGACATGAACACGGTTCGCGCGGAGATCTGATTTGGACCCATCGGTTGT GTCGTTTTATGCTTTTCATTTTATGAAGAATTTTGGCTGGTGCTTGCGGT TGCTTGTGTCTCTAGCTGACACTCTGTTGTTTTTCTGCTGTAGATGGGCG CGTTGCTTTAGCGCCAGCGGTAGAAAGTGATATTCGTGAACATAATGAGT TGCTTGTGGGGTCAGAGAAATTTTTCGTTTCGATGTGTGGAAAGCATAAT GAATGGTACCGCTTTGTTATCTCCAATCGAGGGTGAAAACGTTTGGCATT GTTTCTGTCGTCGGCCAGACGGAAGCAACTGGCAGCCATCTCCACAGAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig103:250..3448+

>mRNA_Ecto-sp13_S_contig103.302.1 ID=mRNA_Ecto-sp13_S_contig103.302.1|Name=mRNA_Ecto-sp13_S_contig103.302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp13_S_contig103:250..3448+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCTTACGTGTGATCGAGCCTCGGGTCGGTGTCACCCTGACCGTGAT
GTCGCTTGCGCTGTTGTGCATGCTGCGTCGAGTTGCTGCCTTCCGCAGCG
GATCGATCGCTGCCCTGTCTCGGACCATGTGCAAACAGCGAGGTCAAACG
GCAAGGGGTGACTGTGCTACTGCAGGCCGACATGCCGGGCCTGAGGGAAC
CGAACTTCCGGGTATAATGCATAGGACGGTCGGCGCTGAAGAGCTGAAGG
CGGAAGTAATAGTGGTAGGAGACATCCATGGGTGCTATAGCGAGATGGTG
TCGCTGCTGGAACGGTGCGGTTACCGGTTGGGCAACGAGGAGGACAGAGA
GCGCTTCTCCGTTGTTCTGGCGGGGGATCTGGTCAACAAGGGGCCCGGGA
GCGTGAACGTTGTGAGGACGGCGAGACAAGAGGGATTCTTGGCGGTTCGC
GGCAACCACGACAACTTTGCCCTTGCAGCAGCCACTGGAGTCGGCAGGTT
CTCCCCGAAAGAGGGAGAAGGCGGTGGTGCAAAACCCCCTCCATGGGTTG
AGCAGCTGTCCAGCGATGATCTCCAGTGGATAAGCGCCCTACCCTACACG
CTGAGCTTCCCTTCCTTCGGTTGCATCATTGTACACGCTGGTCTCGTGCC
CGGAGTGCCTCTGAACGGCCAAGACGCAGAGGCAATGTCTTGCATGCGAA
ACGTTGTGGAGATAGAGGGTGGCGGGGGCTACGAGCCCCGTACTCTCCCA
GACCAAGGTCTGGCCTGGGCCAAGGCCTGGAAGGGGCCGGAGCACGTGTA
CTTTGGACACGACGCGAAGCGAGGGTTTCAGAAAGAGGCGTTTGCCACCG
GTCTAGACACCGGTTGCGTTTACGGGCGGTCGCTGACGGCTGTCGTGTTG
CCCGGGCGAAGGGTGGTGTGCGTCCCGGCGGAGGCCATGTGGTCCGCCCC
TGGTGGAGGAAATGGCAAGAAGGAGGCTGGCAGTGACTGA
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