mRNA_Ecto-sp13_S_contig13863.3019.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13863.3019.1
Unique NamemRNA_Ecto-sp13_S_contig13863.3019.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Match: A0A6H5KV29_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV29_9PHAE)

HSP 1 Score: 677 bits (1748), Expect = 4.570e-238
Identity = 386/426 (90.61%), Postives = 390/426 (91.55%), Query Frame = 1
Query:    1 GGEGGGARLRLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKA-HRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPGFSSFPPTPTPXXXXXXXXXXXXXXXXXXPHATTTLPXXXXXXXXXDSEQPV-DDAGKGRYSGDTNGEVAGTAPGGAGGAPPLCLESEAGVRGGXXXXXXXXXXXPVAEQSASSAWTASPGAARARGASCGERPPVLLLEHVFFKGLPGWGGPGTGGAWEDARLEGSAVAVPVLCDALDVRHFDSR 1272
            GGEGGGARLRLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTS HLHLVLNYCPGGDLFSLLARVGRLPEAQV+VCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLAR GLD APDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKA HRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPGFSSFPPTP  XXXXXXXXXXXXXXXXXX   TTTL          DSEQPV DD GKGR SGDT+GEVAGTAP GAGGAPPLCL +EAGVRGG XXXXXXXXXX     S SSA TASPG ARAR ASCGERPPVLLLEHVFFKGLPGWGGPGTGGAWEDA+LEGSAVAVP LCD LDVRHFDSR
Sbjct:  292 GGEGGGARLRLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSGHLHLVLNYCPGGDLFSLLARVGRLPEAQVKVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARTGLDAAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKADHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPGFSSFPPTPXXXXXXXXXXXXXXXXXXXX--VTTTLAPATTTAPPTDSEQPVADDVGKGRCSGDTHGEVAGTAPSGAGGAPPLCLMNEAGVRGGAXXXXXXXXXX----XSPSSARTASPGGARARRASCGERPPVLLLEHVFFKGLPGWGGPGTGGAWEDAKLEGSAVAVPALCDVLDVRHFDSR 711          
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Match: A0A7S1ZV30_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZV30_TRICV)

HSP 1 Score: 186 bits (472), Expect = 2.860e-51
Identity = 100/228 (43.86%), Postives = 146/228 (64.04%), Query Frame = 1
Query:   37 ALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKAHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 720
            ALK + K  + ++  V H +TE +VL   +HPFIV L+    FQ+   L+ VL+YC GG+LF  L++VG+  E + R  A+++ LA+ ++H   I YRDLKP+NV +DA+GH  L DF L++ G+  +  G T +FCG+  Y APEI+ ++GH   VD WSLG +++E L G  PF     EK        LF++I+RG L+YP+SLS+ + SLLRGLL+ +P  R G
Sbjct:   74 ALKVLRKDNIIKRNQVEHTKTERSVLGYVNHPFIVGLNMA--FQSKDKLYFVLDYCAGGELFFHLSKVGKFAEPRARFYASEIVLAISYVHELDIIYRDLKPENVLLDAKGHVRLTDFGLSKEGISSSSSGAT-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK--------LFEKIRRGHLDYPRSLSSRAQSLLRGLLTKDPKRRLG 290          
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Match: A0A7S0FKL0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FKL0_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.160e-51
Identity = 102/228 (44.74%), Postives = 145/228 (63.60%), Query Frame = 1
Query:   37 ALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKAHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 720
            ALK + K  + ++  V H +TE  VL    HPFIV L+    FQ+   L+ VL+YC GG+LF  L++VG+ PE + R  A+++ LA+ ++H   I YRDLKP+NV +DARGH  L DF L++ G+  +  G T +FCG+  Y APEI+ ++GH   VD WSLG +++E L G  PF     EK        LF++I++G LEYP+SLS  S++LLRGLL+ +P  R G
Sbjct:  205 ALKVLRKDNIVKRNQVEHTKTERNVLGYVKHPFIVGLNMA--FQSKDKLYFVLDYCAGGELFFHLSKVGKFPEPRARFYASEIVLAISYVHELDIIYRDLKPENVLLDARGHVRLTDFGLSKEGISSSSSGAT-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK--------LFEKIRKGHLEYPRSLSPRSVNLLRGLLTKDPRRRLG 421          
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Match: T0QIH2_SAPDV (AGC/AKT protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QIH2_SAPDV)

HSP 1 Score: 186 bits (471), Expect = 5.650e-51
Identity = 99/228 (43.42%), Postives = 138/228 (60.53%), Query Frame = 1
Query:   31 LRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKAHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDR 714
            L A+KS+ KRK+     VR +  E  +L   SHPF++ +   G F+T  H H VL YCPGGD++SLL    ++PEA+V    + +  AL +LH  H+AYRDLKP+N+ +DA+G+  L DF LA+  L   P   T++FCGS  Y APE+I   G+    D+WSLGCVVFE L G  PF   RG +        LFD+I +G++ YP  LS  ++  L+  L L+P +R
Sbjct:  100 LYAIKSIDKRKICGDEAVRLL-VERQILSTASHPFVIRMD--GAFETPTHYHFVLEYCPGGDMYSLLEATPQMPEARVIFYTSSIVSALVYLHHAHVAYRDLKPENILLDAKGYVRLADFGLAKQALS--PTDTTYSFCGSVDYMAPEVILGVGYGLPADVWSLGCVVFEMLTGLPPFYTTRGRRV-------LFDKIVKGQVLYPTYLSPDAVRFLQRCLDLDPKER 315          
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Match: H3G5D8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5D8_PHYRM)

HSP 1 Score: 182 bits (463), Expect = 6.980e-51
Identity = 98/228 (42.98%), Postives = 137/228 (60.09%), Query Frame = 1
Query:   37 ALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKAHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 720
            A+K + K  + +K  V H  TE  VL   SHPF+V L     FQT   L+ VL+YCPGGD+F  L+R G  PEA  +  AA++ LAL HLH + I YRDLKP+N+ +D  GH  L DF LA+ G+    +G T+T CG+  Y  PEI+ + GH T VD W+LG V++E L G  P+        +    Q LF+R++   LE+P+ LS  +++L+ GLL+ +P  R G
Sbjct:   34 AVKILSKPAIVKKQQVEHTRTERRVLASVSHPFVVCLHYA--FQTKDKLYFVLDYCPGGDMFFHLSRCGCFPEAMAKFYAAEIVLALIHLHEQGIVYRDLKPENIMLDVDGHVKLADFGLAKEGITSELNG-TYTMCGTPEYLPPEILNRAGHGTAVDWWNLGMVLYEMLTGRPPW--------YTQDRQELFNRLRGAELEFPQGLSPEAMNLIEGLLTRDPAKRLG 250          
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Match: A0A7S2RK96_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RK96_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.990e-49
Identity = 101/228 (44.30%), Postives = 145/228 (63.60%), Query Frame = 1
Query:   37 ALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKAHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 720
            ALK + K  + ++  V H  TE +VL    HPFIV L+    FQ++  L+ VL+YC GG+LF  L++VG+  E + R  AA++ LA+ ++HS  I YRDLKP+NV +DARGH  L DF L++ G+  +  G   +FCG+  Y APEI+ ++GH   VD WSLG +++E L G  PF     EK        LF++I++G L+YP+SLSA S ++LRGLL+ +P  R G
Sbjct:  356 ALKVLRKDNIIKRNQVEHTRTERSVLGYVRHPFIVGLNMA--FQSNDKLYFVLDYCAGGELFFHLSKVGKFAEPRARFYAAEITLAIEYVHSLDIIYRDLKPENVLLDARGHVRLTDFGLSKEGISSSSSGAN-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK--------LFEKIRKGHLDYPRSLSARSQNMLRGLLTKDPRRRLG 572          
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Match: B8C3Y1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Y1_THAPS)

HSP 1 Score: 178 bits (451), Expect = 6.150e-49
Identity = 99/228 (43.42%), Postives = 140/228 (61.40%), Query Frame = 1
Query:   37 ALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKAHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 720
            ALK + K  + ++  V H +TE +VL    HPFIV L+    FQ+   L+ VL+YC GG+LF  L +VG+  E +    AA++ LA+ ++HS  I YRDLKP+NV +D+RGH  L DF L++ G+  +  G   +FCG+  Y APEI+ ++GH   VD WSLG +++E L G  PF     EK        LF++I++G LEYPK LS  +  LLRGLL+ +P  R G
Sbjct:   26 ALKVLKKDNIIKRNQVEHTKTERSVLGYVKHPFIVGLNMA--FQSKDKLYFVLDYCAGGELFFHLGKVGKFSEHRACFYAAEITLAISYVHSLDIVYRDLKPENVLLDSRGHVRLTDFGLSKEGISNSSSGAN-SFCGTPEYLAPEILNRQGHGRAVDWWSLGALLYEMLTGLPPFYCRDREK--------LFEKIRKGTLEYPKYLSPRATLLLRGLLTKDPRRRLG 242          
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Match: W4FHU1_9STRA (AGC protein kinase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FHU1_9STRA)

HSP 1 Score: 182 bits (463), Expect = 9.490e-49
Identity = 101/231 (43.72%), Postives = 140/231 (60.61%), Query Frame = 1
Query:   28 RLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKAHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 720
            +L A+K++ K  V  +  V H  TE  VL    HP+IV L     FQT + L+ V++YCPGG+LF  L+R+ R PEA   V AA++ LAL HLHS  + YRDLKP+N+  DA GH +L DF LA+ G+    +G T + CG+  Y  PEI+ + GH T VD W+LG V++E L G  P+     +K        LFDR++   L +P  +SAP+ SL+ GLL+ NP +R G
Sbjct:  189 KLYAMKTLNKSNVKRRNQVEHTRTERRVLGFGKHPYIVHLHYA--FQTKQKLYFVIDYCPGGELFFHLSRMERFPEAMAMVYAAEITLALDHLHSLGVVYRDLKPENILFDAVGHVLLADFGLAKEGITDGAEG-TNSMCGTPEYLPPEILDRVGHGTSVDWWALGMVLYEMLTGLPPWYTRNRQK--------LFDRVRHAPLTFPNYVSAPAQSLIAGLLNRNPVERLG 408          
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Match: Q39908_LINPO (cAMP-dependent protein kinase n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=Q39908_LINPO)

HSP 1 Score: 177 bits (449), Expect = 1.950e-48
Identity = 97/229 (42.36%), Postives = 135/229 (58.95%), Query Frame = 1
Query:   28 RLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKAHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDR 714
            RL A+K + K  V ++  V H +TE +VL+  SHPFIV+L     FQT + L++V+ YCPGG+LF  L+R GR  E + R   A+ + A+ +LH  ++ YRDLKP+N+ ID  GHA + DF L + G+    +    T CG+  Y APEI+ K+GH   VD +S+G + +E L G  PF        +    Q LFDRI+RG L YP  +S  +   LR LL  NPD R
Sbjct:   33 RLYAMKMLRKENVIKRNQVEHTKTERSVLETVSHPFIVTLHYA--FQTPKKLYMVMEYCPGGELFFHLSRAGRFSEGRTRFYVAETSSAVAYLHQLNVIYRDLKPENLLIDGEGHAKITDFGLRKEGIQ--DNHSAMTMCGTPEYLAPEILDKKGHGKAVDWYSVGALTYEMLTGLPPF--------YTKDLQKLFDRIRRGELTYPDYVSVLAKEFLRALLQRNPDAR 249          
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Match: A0A0K6SAU2_9ALVE (Uncharacterized protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6SAU2_9ALVE)

HSP 1 Score: 181 bits (460), Expect = 2.000e-48
Identity = 99/228 (43.42%), Postives = 138/228 (60.53%), Query Frame = 1
Query:   37 ALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLSPGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALRHLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCGSAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKAHRHQTQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPG 720
            A+K + K  + ++  V H +TE +VL+  SHPFIV L     FQT++ L+ VL YCPGG+LF  L+R GR  E + R  +A++ LAL HLHS +I YRDLKP+NV +DA GH  L DF L++ G++   +    + CG+  Y APEI+ + GH   VD WSLG +++E L G  PF     EK        LF+ I+ G L+YP  +S  + SLL+GL   +P  R G
Sbjct:  129 AMKMLRKENIVKRNQVEHTKTERSVLEYISHPFIVQLVYA--FQTAKKLYFVLEYCPGGELFFHLSRAGRFTEVRARFYSAEILLALEHLHSLNIVYRDLKPENVLLDAEGHVRLTDFGLSKEGIE--DNFSARSLCGTPEYLAPEILNQVGHGKAVDWWSLGALIYEMLTGLPPFYTRDREK--------LFENIRHGELKYPPFVSPVAKSLLQGLFHRDPAKRLG 344          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13863.3019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV29_9PHAE4.570e-23890.61Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S1ZV30_TRICV2.860e-5143.86Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0FKL0_9STRA3.160e-5144.74Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
T0QIH2_SAPDV5.650e-5143.42AGC/AKT protein kinase n=2 Tax=Saprolegnia TaxID=4... [more]
H3G5D8_PHYRM6.980e-5142.98Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A7S2RK96_9STRA3.990e-4944.30Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B8C3Y1_THAPS6.150e-4943.42Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
W4FHU1_9STRA9.490e-4943.72AGC protein kinase n=2 Tax=Aphanomyces astaci TaxI... [more]
Q39908_LINPO1.950e-4842.36cAMP-dependent protein kinase n=1 Tax=Lingulodiniu... [more]
A0A0K6SAU2_9ALVE2.000e-4843.42Uncharacterized protein n=2 Tax=Chromera velia CCM... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13863contigEcto-sp13_S_contig13863:287..4587 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score661.8
Seed ortholog evalue2.2e-187
Seed eggNOG ortholog2880.D8LH93
Model size1272
KEGG koko:K08793,ko:K13303
KEGG Pathwayko04068,ko04151,map04068,map04151
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0603@1,KOG0603@2759
EC2.7.11.1
Cds size1272
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13863.3019.1prot_Ecto-sp13_S_contig13863.3019.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13863 287..4587 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462739.447089-CDS-Ecto-sp13_S_contig13863:286..8981681462739.447089-CDS-Ecto-sp13_S_contig13863:286..898Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13863 287..898 -
1681462739.456958-CDS-Ecto-sp13_S_contig13863:1492..16641681462739.456958-CDS-Ecto-sp13_S_contig13863:1492..1664Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13863 1493..1664 -
1681462739.4660943-CDS-Ecto-sp13_S_contig13863:2167..22881681462739.4660943-CDS-Ecto-sp13_S_contig13863:2167..2288Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13863 2168..2288 -
1681462739.4840367-CDS-Ecto-sp13_S_contig13863:2914..30151681462739.4840367-CDS-Ecto-sp13_S_contig13863:2914..3015Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13863 2915..3015 -
1681462739.500424-CDS-Ecto-sp13_S_contig13863:3916..40831681462739.500424-CDS-Ecto-sp13_S_contig13863:3916..4083Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13863 3917..4083 -
1681462739.5146487-CDS-Ecto-sp13_S_contig13863:4488..45871681462739.5146487-CDS-Ecto-sp13_S_contig13863:4488..4587Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13863 4489..4587 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13863.3019.1

>prot_Ecto-sp13_S_contig13863.3019.1 ID=prot_Ecto-sp13_S_contig13863.3019.1|Name=mRNA_Ecto-sp13_S_contig13863.3019.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=424bp
GGEGGGARLRLRALKSVCKRKVTEKGLVRHMETELAVLKQCSHPFIVSLS
PGGQFQTSRHLHLVLNYCPGGDLFSLLARVGRLPEAQVRVCAAQLALALR
HLHSKHIAYRDLKPDNVCIDARGHAVLVDFSLARIGLDVAPDGKTFTFCG
SAAYAAPEIITKEGHDTRVDLWSLGCVVFEALVGEHPFRRPRGEKAHRHQ
TQALFDRIQRGRLEYPKSLSAPSLSLLRGLLSLNPDDRPGFSSFPPTPTP
PTPPPTTISRQEEQHQQHPHATTTLPPATTTSPPTDSEQPVDDAGKGRYS
GDTNGEVAGTAPGGAGGAPPLCLESEAGVRGGAAAAAAAAARRPVAEQSA
SSAWTASPGAARARGASCGERPPVLLLEHVFFKGLPGWGGPGTGGAWEDA
RLEGSAVAVPVLCDALDVRHFDSR
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mRNA from alignment at Ecto-sp13_S_contig13863:287..4587-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13863.3019.1 ID=mRNA_Ecto-sp13_S_contig13863.3019.1|Name=mRNA_Ecto-sp13_S_contig13863.3019.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4301bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13863:287..4587- (Ectocarpus species13 EcNAP12_S_4_19m)
GGGGGGGAGGGCGGGGGCGCACGGCTGAGACTCAGGGCGTTGAAGAGCGT CTGCAAGAGAAAGGTCACAGAGAAGGGTCTGGTGCGACACATGGAAACCG TGAGTGAGCGCCTTGTCTATTCATATTACCCGAAAGCAGGCAATCGTCGT TGTGTCTTAGTAAGACTGCTGTGCCCAGATTCGCAATTTTTTCTTCTTGG TTCGTTGGGGTTCGCTGGGCTGTTCGAGTCAAAGACACGTAATCAGTGCG AGCTGTTCGAGCTTGGGAAAAGCCACTGATGGCAGCTGGCAGCTGATTCA CACCAACGCATGCTTTCCTTTCATATTGCATCACGCCTTGATGACACCGC TAATATGCTCTGATGACCCCACTCTGGAGGTGCCCTTGTATTGGGGTTAT TGTTTTTCATATGCATATTTACCACTGGTTCTTCAAGGTTACACACACAT GACGAGCCTGCTCTCCCCGCGGGAATAAATTCTCCCGTCTCCAAATCGCG CCAGGAACTGGCGGTGTTGAAGCAGTGCTCGCATCCTTTTATCGTGTCGC TCAGCCCGGGAGGTCAGTTCCAGACATCACGACACCTTCACCTGGTGTTG AATTATTGTCCGGGCGGGGACCTGTTCTCTCTCCTGGCTCGAGTGGGACG ATTGCCTGAGGCGCAAGTGAGGTGAGACGCACAAGACTGCTTGGGGCCCA TTTTTCCCTCTTGCTGTCTTTGCTGCTGAATCTGTCGTCTGTGTCATCAT CGTCGTCGTCGTCGTCGTCGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTG CTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCGAAGGCAGCTTCG TTGTCTCTTTCTGCCTCTCGGTGTTTCTCGTCGACTGTTTTGTGCACGGG TTGTTTTGTGTCGCATGCTCGCGTGGATGAACCTTTACTCTGCCGTCGTG TGCTCCGATTACACCGCAGGTTGGTTGAATGATTGAGCTTTTTTGTTGTT GTTGTGCCGGGAAACTATTATCGGAACTAGGAGATATGACTGGTTTCGGG TGTCGGCTGGATACAGGCTCTCAGTGGGTAGTGTGGTTAGGCTATATTTT TGTTCCGCCTTGGATGGTTGTTTGAACGTATTTCGCCTCCAGACCAAGCT TGTGGTCGGCGTACCCTCCCCGGTGCTGATCTGGTGCGGGTGTCGCCCGC AGTCGGCACGCCTACAAGGCCCGTCGAGCGCTTCCCTTCCCTCCTCTTTT GTGACTGTTGCTGTTGCTGTGGTTTGCTTCGACAGCATCGACGGGTGCGA AATGTTATCGCCAAGGAAAACGCTCGTTTCCCCCCTCTACTCGACAACAT CGGACGGTTTTAGAACCTCGTCATAAGCACGAGTGAATAATGCCTCGTGT TTTCGGCGGTTTTGTCGCTATTGACAGGGGCCCTGCTCGCGTGCCTTTAG GCCTTCTCCCCTCTGTTGTCAGGCGCCGATTTGGTGTTTCCTGTTCACCC CACGTTGCCCAACTTCTCCCCTCTGTTGGTGCATATGTTGCCTTTGTGAC GAAATCGTGTCCCTTCCTTCAGGGTGTGCGCAGCACAGCTGGCCCTAGCG CTGAGGCACCTCCATAGCAAGCACATCGCCTACCGAGACCTCAAGCCCGA CAACGTGTGCATCGACGCCAGAGGTGAGGCGAGACTGTGCGTCGAATGAC TGGAGGGGAGGGGGGGGGGGGGGGGGGGCGCAGCACTTTTTCCGACGCAA AAACAAGCGGACGCGAGCGAGGATGGGGGCAAGGGGGGGAATAGGTGTAC AGCAGCCAGAGCGGGGGAGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGTG GGTGGGGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGCAGCAC TTTTTCCGACGCATAATCAAGCGGACGCGAGCGATGATGGGGGCAAGGGG GCGAATAGGTGTATTAGGTTAGAAGCAATCGGAGATCATGCCATACCACT GGTTTTGACACTCAGAGTCCCACGAACAGGATAATACAGAGTAAGGAATA TTGTACGTATACCCCCCCGTGGGCCAGCAAAAACCCGGCTTCGTTCCGGC GTTGTAGGGATGCGAGGTCAATGGTCTAATGACCACTGTACGCCATGTGT TTACATGAGTACACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCC CCCGCCACCGCCCCCCCCCCACAGGCTGCTCAAACACACACACCCCCNNN NNNNNNNTGAGCACCCCCGCCCTGCCCCCTGTGTTCTTCCTGCTTACAGG TCATGCAGTCCTAGTGGACTTCTCGTTGGCGAGAATAGGGCTGGACGTGG CCCCAGACGGCAAGACCTTCACCTTCTGCGGCAGCGCGGCGTACGCGGCA CCGGAAATCATCACGAAGGAGTGAGTGATGCGTGATGGGGCCCCGTGGAT GATAACTTCGTGGTTCATTGTGGGGGGTCTGCGGTGGCGTTTTGCTTTTT TCTAGCGTCGTGTCTCGCAGAAGCGTTGCTGTGGGCTGGCAGGCAAAGGG GGAATCATGTTAACTGTGTCATGGGTTGCGAAGACCGGCGGTACAGAAGC GTGCCTTCGTGGAGAAGGCTTGTAGACTTGACTGCTGTGTAATGTCTGTG GGTATTTTCGTATCGGAACATCTTTACGGCAGGTCTTGAGATGCCAATGA CTGACTTTCTTCGCGATGCGGGTAGTGTAGTGTCACTCCGCTCTGGTGCA TGCTTCTCGACTATGTTGTGTTGTCCGATAAGGAATTTTTTGTCAAGAGT ATTGGACATGTTGGTGAAGGCGTCGTTGGCCGACCTTCAGTGCACCCCCC CCACACATTGAGTGCGTCGTTCTCGTAACCCCCCTAACTCAGCCCATGTA CATACGTCATCCCCAACCCCCAGAGGACACGACACGCGGGTGGACCTTTG GTCGTTGGGGTGCGTGGTGTTCGAGGCCCTGGTGGGAGAGCACCCCTTCC GACGCCCTCGGGGGGAGAAGGCCCACCGCCACCAGACCCAGGCTTTGTTC GACAGGATCCAACGCGGCCGGCTGGAGTACCCCAAGTCGCTGTCGGTGAG TCTTTTTTTTCGGGGAGGGGGGGGTGCACACGCGGCACACATGTGTGCAT GCGCGTCCTGTGTATGATCCCTGTGCAAGGGTCCACGGCCTCGGGAGTGC AGTCGAGATTTTGGTGACAGGCAGACTTGTGGCGGCTACGGTTCAAGAGA TATGACTTGGAAGAGAAAGTGCGAGTGTGAGAGATAATAGGATGCTTGTC CAAGCCATGATACATGGTTATGAGAGCACCGGAATTAAGAGAGTGTTTTC GGTTTGCCCCGACTCTCACGTAAGGCGTAGCCGCTACCGTGCACGGCACA CCCCCCTGTGTTGGGAGCTAGCTGCGTTTGGGGTGACTCCCCTCCCCCCC TTGTTGTTCTGGGCAGACCAAATTCTTCGCTATCCGCCGACATGCACGAG TCAAGGAGAATTTACAATTCGATTCATGCCCAAAGTGTCGTGTGCCCTAC CTGTTCATGTGCATGTTTTTTGTTCAGAACCTGCTTCCTTCCTCGCCTTC TCTCTACGCAACGTTGTGTTGTCGTTCTTGTTGTACGTGCGGTGGCGGCT TGCTTGCCGCCTTCTTGGGTGTGCGCTCTCTGCGCGCAGGCACCCTCTTT GTCGCTGCTCCGAGGACTCCTCTCGCTCAACCCGGACGACCGCCCGGGCT TCTCTTCCTTCCCGCCAACACCAACACCACCAACACCACCGCCGACAACA ATATCGAGACAAGAAGAACAACACCAACAACACCCCCACGCAACGACAAC CTTACCCCCAGCGACGACGACATCGCCCCCCACCGACTCAGAACAGCCGG TCGACGATGCGGGCAAGGGCAGATACTCCGGAGACACCAACGGGGAGGTA GCAGGCACAGCACCAGGCGGAGCGGGGGGGGCACCGCCGCTGTGCTTGGA AAGCGAGGCGGGGGTGCGCGGGGGTGCGGCGGCGGCGGCGGCGGCGGCGG CGCGTAGGCCCGTGGCGGAGCAGAGCGCCTCCTCCGCGTGGACCGCTTCC CCGGGGGCGGCTAGGGCTAGGGGAGCAAGTTGTGGGGAGCGACCACCTGT CTTGCTCTTGGAGCACGTTTTTTTTAAAGGGCTGCCGGGTTGGGGGGGTC CGGGGACGGGGGGCGCGTGGGAGGATGCAAGGCTCGAGGGCTCGGCGGTG GCAGTGCCGGTCCTGTGCGACGCGCTCGACGTGCGACATTTCGATTCAAG G
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13863:287..4587-

>mRNA_Ecto-sp13_S_contig13863.3019.1 ID=mRNA_Ecto-sp13_S_contig13863.3019.1|Name=mRNA_Ecto-sp13_S_contig13863.3019.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1272bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13863:287..4587- (Ectocarpus species13 EcNAP12_S_4_19m)
GGGGGGGAGGGCGGGGGCGCACGGCTGAGACTCAGGGCGTTGAAGAGCGT
CTGCAAGAGAAAGGTCACAGAGAAGGGTCTGGTGCGACACATGGAAACCG
AACTGGCGGTGTTGAAGCAGTGCTCGCATCCTTTTATCGTGTCGCTCAGC
CCGGGAGGTCAGTTCCAGACATCACGACACCTTCACCTGGTGTTGAATTA
TTGTCCGGGCGGGGACCTGTTCTCTCTCCTGGCTCGAGTGGGACGATTGC
CTGAGGCGCAAGTGAGGGTGTGCGCAGCACAGCTGGCCCTAGCGCTGAGG
CACCTCCATAGCAAGCACATCGCCTACCGAGACCTCAAGCCCGACAACGT
GTGCATCGACGCCAGAGGTCATGCAGTCCTAGTGGACTTCTCGTTGGCGA
GAATAGGGCTGGACGTGGCCCCAGACGGCAAGACCTTCACCTTCTGCGGC
AGCGCGGCGTACGCGGCACCGGAAATCATCACGAAGGAAGGACACGACAC
GCGGGTGGACCTTTGGTCGTTGGGGTGCGTGGTGTTCGAGGCCCTGGTGG
GAGAGCACCCCTTCCGACGCCCTCGGGGGGAGAAGGCCCACCGCCACCAG
ACCCAGGCTTTGTTCGACAGGATCCAACGCGGCCGGCTGGAGTACCCCAA
GTCGCTGTCGGCACCCTCTTTGTCGCTGCTCCGAGGACTCCTCTCGCTCA
ACCCGGACGACCGCCCGGGCTTCTCTTCCTTCCCGCCAACACCAACACCA
CCAACACCACCGCCGACAACAATATCGAGACAAGAAGAACAACACCAACA
ACACCCCCACGCAACGACAACCTTACCCCCAGCGACGACGACATCGCCCC
CCACCGACTCAGAACAGCCGGTCGACGATGCGGGCAAGGGCAGATACTCC
GGAGACACCAACGGGGAGGTAGCAGGCACAGCACCAGGCGGAGCGGGGGG
GGCACCGCCGCTGTGCTTGGAAAGCGAGGCGGGGGTGCGCGGGGGTGCGG
CGGCGGCGGCGGCGGCGGCGGCGCGTAGGCCCGTGGCGGAGCAGAGCGCC
TCCTCCGCGTGGACCGCTTCCCCGGGGGCGGCTAGGGCTAGGGGAGCAAG
TTGTGGGGAGCGACCACCTGTCTTGCTCTTGGAGCACGTTTTTTTTAAAG
GGCTGCCGGGTTGGGGGGGTCCGGGGACGGGGGGCGCGTGGGAGGATGCA
AGGCTCGAGGGCTCGGCGGTGGCAGTGCCGGTCCTGTGCGACGCGCTCGA
CGTGCGACATTTCGATTCAAGG
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