prot_Ecto-sp13_S_contig1386.3017.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1386.3017.1
Unique Name	prot_Ecto-sp13_S_contig1386.3017.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	422

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: D8LC91_ECTSI (PRF3, plastid translation release factor RF3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC91_ECTSI)

HSP 1 Score: 794 bits (2051), Expect = 3.450e-286
Identity = 402/420 (95.71%), Postives = 404/420 (96.19%), Query Frame = 0

Query:    1 MNPLDGFGVGGRRAVTRRCIRPRSVLMLSCLVMTSHAFMAPGAQVRAPRQDSRCQSTSVELSEAEAEPGIEPLTEPKLAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420
            MNPLDGFGVGGRRAV RRCIRPRSVLMLSCLVMTSH FMAPGAQVRAPRQ S CQSTSVELSEAEAEPG        LAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGE+FKGVLDRDT TVHLFERAGRTKKATDMPELDLHDP LPELITEELHEQLLEDVEMLDELVEPLDMERVL GEQSPMFFGSAMTNFGVELFLKRFLTIGQKP+SRRMGNADVILP YNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK
Sbjct:    1 MNPLDGFGVGGRRAVARRCIRPRSVLMLSCLVMTSHGFMAPGAQVRAPRQGSPCQSTSVELSEAEAEPGTXXXXXXXLAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEEFKGVLDRDTKTVHLFERAGRTKKATDMPELDLHDPKLPELITEELHEQLLEDVEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPSSRRMGNADVILPGYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420

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BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A6H5KH59_9PHAE (Tr-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH59_9PHAE)

HSP 1 Score: 622 bits (1605), Expect = 3.120e-221
Identity = 315/323 (97.52%), Postives = 317/323 (98.14%), Query Frame = 0

Query:   52 SRCQSTSVELSEAEAEPGIEPLTEPKLAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMG 374
            SRCQSTSVELSEAEA PG EP TEPKLAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEY GNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGE+FKGVLDRDTNTVHLFERA RTKKATDMPE+DLHDP LPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMG
Sbjct:    8 SRCQSTSVELSEAEAGPGTEPKTEPKLAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYAGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEEFKGVLDRDTNTVHLFERAARTKKATDMPEIDLHDPKLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMG 330

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BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A836C6V6_9STRA (PRF3, plastid translation release factor RF3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6V6_9STRA)

HSP 1 Score: 523 bits (1347), Expect = 1.500e-179
Identity = 269/336 (80.06%), Postives = 292/336 (86.90%), Query Frame = 0

Query:   89 GGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRM---GNA-DVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420
            G QWAA   EI RRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSR+DQRKATSDWMELEKQRGISITSTVLSFEY G  INLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVC+LR LPIFTF NKLDRPSLSPFELLDQIE +FG++M PVLWPIGDG +F+GVLDRDTN VHLFER  RT +A +M  L+L DP LP  I E L+ QL EDVE+L+ L+EPLDM +V  GEQSPMFFGSAM NFGVELFLKRFLT+GQ PA R +   GNA + + P+Y EFTGF FKLQANLDPRHRDRLAY+RVVSGR+EKGM+
Sbjct:   69 GAQWAAPAAEIARRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMELEKQRGISITSTVLSFEYAGAQINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCRLRGLPIFTFCNKLDRPSLSPFELLDQIEGDFGLQMVPVLWPIGDGPNFQGVLDRDTNLVHLFERGDRTGRAKEMGTLELDDPELPIAIGETLYNQLREDVEVLEGLIEPLDMAKVHAGEQSPMFFGSAMVNFGVELFLKRFLTLGQGPAPRSISSGGNAAEQLTPEYPEFTGFCFKLQANLDPRHRDRLAYIRVVSGRFEKGMR 404

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BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A6S9HEF4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HEF4_HETAK)

HSP 1 Score: 481 bits (1237), Expect = 3.800e-163
Identity = 244/330 (73.94%), Postives = 286/330 (86.67%), Query Frame = 0

Query:   92 WAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELI-TEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420
            +AA   E+ RRRNFAIISHPDAGKTT+TEKLLLYGGAIQ+AGAV++R+ QRKATSDWMELEKQRGISITSTVLSFEYDG+ INLLDTPGHQDFSEDTYRTLAAADN+VMLVDAAKGLEPQT+KLFEVC+LR LPIFTF NK+DRP+LSPF+L+DQIE EFG++M PV+WPIG+G+ FKGVL+RD+  ++LFE+  R KKA +   + L DP L  ++  ++L +QL+EDVEMLD L EPLDM RVL GEQSPMFFGSAMTNFGVE+FL+RFLT+GQ P +R    A  + P + EFTGFVFKLQANLDP+HRDRLAYVRV SG++EKGMK
Sbjct:   61 YAAPEKEVIRRRNFAIISHPDAGKTTMTEKLLLYGGAIQDAGAVKTRASQRKATSDWMELEKQRGISITSTVLSFEYDGHAINLLDTPGHQDFSEDTYRTLAAADNSVMLVDAAKGLEPQTKKLFEVCRLRGLPIFTFCNKMDRPALSPFDLVDQIEGEFGLQMCPVVWPIGNGDRFKGVLERDSGLIYLFEKGQRGKKAEETT-VRLDDPGLRGILGDDQLFDQLMEDVEMLDGLFEPLDMARVLAGEQSPMFFGSAMTNFGVEVFLRRFLTLGQAPPARTTA-AGPLAPTHPEFTGFVFKLQANLDPKHRDRLAYVRVCSGKFEKGMK 388

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BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A7S2WHP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHP1_9STRA)

HSP 1 Score: 471 bits (1213), Expect = 5.380e-160
Identity = 250/363 (68.87%), Postives = 286/363 (78.79%), Query Frame = 0

Query:   64 AEAEPGIEPLTEPKLAPVAPTTTSKGGQ--WAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGN----HINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420
            AEA PG E     K AP        GG   + A   EI+RRRN AII+HPDAGKTTLTEKLLLYGGA+Q+AGAVR+R++QR ATSDWMELE+QRGISITSTVLSFEY+      H+NLLDTPGHQDFSEDTYRTLAA DNAVMLVDAAKGLEPQTRKL EVC+L  LPIFTF NK+DRP+LSP EL+DQIE EFG+   PV+WPIGDG +F+GVLDR    V+LFER  RT KA D   + L DP+L ELI E L+ QL+EDVE+LD L+EPLDM+RV  G+QSPMFFGSAM NFGVELFLK+FL +G  P    +    V+  DY EFTGFVFKLQANLDP+HRDRLAY+R+VSGR+EKGMK
Sbjct:   56 AEAPPGTEAK---KGAPAG------GGSSLFLAPRTEIERRRNLAIIAHPDAGKTTLTEKLLLYGGALQQAGAVRTRANQRAATSDWMELEQQRGISITSTVLSFEYEHGDRQLHVNLLDTPGHQDFSEDTYRTLAACDNAVMLVDAAKGLEPQTRKLLEVCRLSGLPIFTFCNKMDRPALSPLELIDQIEGEFGLNCHPVVWPIGDGPEFQGVLDRQEGLVYLFERGDRTGKAKDKATVSLDDPDLEELIGERLYSQLMEDVEVLDGLMEPLDMDRVRDGDQSPMFFGSAMNNFGVELFLKKFLDMGTTPQPMEVPGG-VLTADYGEFTGFVFKLQANLDPKHRDRLAYIRIVSGRFEKGMK 408

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BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A7S2FZH2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZH2_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 1.540e-149
Identity = 229/338 (67.75%), Postives = 272/338 (80.47%), Query Frame = 0

Query:   98 EIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPN-LPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMG--------NADVILP------DYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420
            EI+RRRN AII+HPDAGKTTLTEKLLLYGGA+Q+AGAVR+R+DQR ATSDWMELEKQRGISITSTVLSF+Y G HINLLDTPGHQDFSEDTYRTLAA+DNAV L+DAAKGLEPQTRKL EV KL  +P+FTF NK+DRP+LSPFEL+DQIE +F +   PV+WPIG GE+F+G+L+R+T TVHLFE+  RT KA DM  + L D   L +L+  +++ QLLED EMLD L+EPLD++ V+ G Q+PMFFGSAM NFGVELFL+ FL  G +P  R +           DVI+       D +EF+ FVFKLQAN+DP+HRDRLAY+RVVSGRY KGMK
Sbjct:   63 EIERRRNLAIIAHPDAGKTTLTEKLLLYGGAVQQAGAVRTRADQRAATSDWMELEKQRGISITSTVLSFDYLGKHINLLDTPGHQDFSEDTYRTLAASDNAVTLIDAAKGLEPQTRKLLEVTKLSGIPVFTFCNKMDRPALSPFELIDQIEADFKLTCVPVVWPIGMGEEFRGLLERETKTVHLFEKGIRTGKAVDMATVPLDDAETLEDLLGADVYAQLLEDAEMLDGLIEPLDLDEVMDGNQTPMFFGSAMNNFGVELFLRFFLQWGSRPQKRLISPPXXXPKATDDVIVEEEFIEADDSEFSAFVFKLQANIDPKHRDRLAYLRVVSGRYNKGMK 400

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BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A1Z5KM76_FISSO (Peptide chain release factor 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM76_FISSO)

HSP 1 Score: 445 bits (1144), Expect = 2.920e-149
Identity = 215/338 (63.61%), Postives = 276/338 (81.66%), Query Frame = 0

Query:   84 TTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITE-ELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420
            ++ S    + A   EI +RRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR +++QR   SD++ +E++RGISI+STVL+F+Y    I LLDTPGHQDFSEDTYR LAA D A+ML+DAAKGLEPQTRKLFEVC+LR +P+FTFVNK+DRP+LSP++++DQIE+EFG++  P+LWPIGDG+ FKGVLDR TNTVHL+++A +     +  E+ L D  L +LI + EL+++L+ED E+L+E++ PLDMERV+IG+QSP+FFGSAMTNFGV+LFL  F  +G +P  R      +I PDY EFTGFVFK QANLDP+HRDRLAYVR+VSG+YEKGMK
Sbjct:   40 SSESSSSTYQAPLSEITKRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRHKAEQRATQSDFLAMEQERGISISSTVLNFDYQDYTIRLLDTPGHQDFSEDTYRALAATDQALMLMDAAKGLEPQTRKLFEVCQLRSIPLFTFVNKMDRPALSPYDIMDQIEQEFGLEPHPILWPIGDGDRFKGVLDRTTNTVHLYQKAEKRGAKAEATEVALDDEQLKDLIGDSELYDKLMEDAELLNEMIPPLDMERVMIGKQSPLFFGSAMTNFGVQLFLDHFCRMGTEPLGRETSKDILITPDYGEFTGFVFKTQANLDPKHRDRLAYVRIVSGKYEKGMK 377

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BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: B7G1B1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G1B1_PHATC)

HSP 1 Score: 441 bits (1133), Expect = 5.910e-147
Identity = 220/336 (65.48%), Postives = 272/336 (80.95%), Query Frame = 0

Query:   92 WAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDP-NLPELIT-EELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRM-----GNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420
            + A   EIDRRRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR +++QR   SD+ME+E++RGISI+STV++FEY    I L+DTPGHQDFSEDTYR LAAADNA+ML+DAAKGLEPQTRKLFEVC++R LP+FTF NK+DRP+LSP+E++DQIE EFG++  P+LWPIGDG+ FKGVLDR TN VHL+++A +      + E+ L D   L   I  EEL  +LLED E+L+EL+ PLDMERV+ GEQSP+FFGSAMTNFGV+LFL +F ++G KP  R          ++I P++ EFTGF+FK QANLDP+HRDRLAYVRVVSGRYEKGMK
Sbjct:   87 YQAPQIEIDRRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRQKAEQRATQSDFMEMEQERGISISSTVMNFEYQDFGIRLMDTPGHQDFSEDTYRALAAADNALMLLDAAKGLEPQTRKLFEVCRMRRLPLFTFCNKMDRPALSPYEIMDQIEDEFGLETHPILWPIGDGDRFKGVLDRTTNVVHLYQKAEKRGGKAGVQEVPLEDTVTLKATIDDEELFHKLLEDAELLEELINPLDMERVMKGEQSPLFFGSAMTNFGVQLFLDKFCSMGTKPMGRMADTKSENEEEMIGPNHEEFTGFIFKTQANLDPKHRDRLAYVRVVSGRYEKGMK 422

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BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: B5YM78_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YM78_THAPS)

HSP 1 Score: 439 bits (1129), Expect = 1.360e-146
Identity = 223/355 (62.82%), Postives = 278/355 (78.31%), Query Frame = 0

Query:   92 WAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKA----TDMPELDLHDPNLPELITE-ELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNAD---------------------VILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420
            ++A   EI+RRRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR + +QR   SD+ME+E+QRGISI++TV+SF+Y+  HIN+LDTPGHQDFSEDTYR LAAADNAVML+DAAKGLEPQTRKLFEVC++R+LP+FTFVNK+DRP+L+P+E++DQIE EFG++  P+LWPIGDGE FKGVLDR  N VHLF+RA R  K+      M +LD     L E I + EL ++LLED E+L+EL+ PLDMERV+ GEQSP+FFGSAMTNFGV+LFL +F  +G KP+ R     D                     +I P+Y +FTGFVFK QANLDP+HRDRLAY+R+VSG ++KGMK
Sbjct:   55 YSAPLTEINRRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRMKGEQRGTQSDFMEMERQRGISISATVMSFDYNALHINILDTPGHQDFSEDTYRALAAADNAVMLLDAAKGLEPQTRKLFEVCRMRQLPLFTFVNKMDRPALTPYEIMDQIEAEFGLETHPILWPIGDGERFKGVLDRLENMVHLFDRAERGSKSEVRQVSMSDLD----TLKECINDDELFDKLLEDQELLEELINPLDMERVIAGEQSPLFFGSAMTNFGVQLFLDKFCAMGTKPSGRLAKRMDEVKGKKAKEAASSIDDDEGDELIGPEYEDFTGFVFKTQANLDPKHRDRLAYIRIVSGSFQKGMK 405

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BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: W7TN94_9STRA (Peptide chain release factor 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN94_9STRA)

HSP 1 Score: 441 bits (1133), Expect = 2.750e-146
Identity = 221/326 (67.79%), Postives = 265/326 (81.29%), Query Frame = 0

Query:   95 TPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420
            T  ++  RR FAIISHPD+GKTTLTEKLLLYGGAI EAGAVRSR+ QRK  SD+ME+EKQRGISI+STVL+F+Y G  INLLDTPGH DF EDTYRTL+AADNA+MLVDA KGLE QTRKLFEVC+LR LPI+TFVNK+DRP+  P EL+D+IERE G+++ P++WPIGDGEDFKGV DR+   VHLFER GR +KA  +  L L DP LP+L+   L  QL EDVE+LD L+  LD+ +V+ GEQ+PMFFGSAM+NFGV LFL +FL I + PA R    A  I P++ EFTGFVFKLQANL+P+HRDR+AYVR+ SG++EKGMK
Sbjct:  150 TKSKVLERRTFAIISHPDSGKTTLTEKLLLYGGAINEAGAVRSRASQRKTQSDFMEMEKQRGISISSTVLTFDYSGFQINLLDTPGHADFGEDTYRTLSAADNALMLVDAGKGLEAQTRKLFEVCRLRGLPIYTFVNKMDRPAKGPVELVDEIEREMGLEVVPMVWPIGDGEDFKGVYDREARVVHLFERQGRKEKAAALDALPLSDPGLPKLLGSTLFAQLEEDVELLDALMPSLDVAKVMRGEQTPMFFGSAMSNFGVALFLNKFLAISEPPAPRET-TAGSIGPEHPEFTGFVFKLQANLNPKHRDRVAYVRICSGKFEKGMK 474

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LC91_ECTSI	3.450e-286	95.71	PRF3, plastid translation release factor RF3 n=1 T...	[more]
A0A6H5KH59_9PHAE	3.120e-221	97.52	Tr-type G domain-containing protein n=1 Tax=Ectoca...	[more]
A0A836C6V6_9STRA	1.500e-179	80.06	PRF3, plastid translation release factor RF3 n=1 T...	[more]
A0A6S9HEF4_HETAK	3.800e-163	73.94	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2WHP1_9STRA	5.380e-160	68.87	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A7S2FZH2_9STRA	1.540e-149	67.75	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A1Z5KM76_FISSO	2.920e-149	63.61	Peptide chain release factor 3 n=2 Tax=Fistulifera...	[more]
B7G1B1_PHATC	5.910e-147	65.48	Predicted protein n=1 Tax=Phaeodactylum tricornutu...	[more]
B5YM78_THAPS	1.360e-146	62.82	Predicted protein n=1 Tax=Thalassiosira pseudonana...	[more]
W7TN94_9STRA	2.750e-146	67.79	Peptide chain release factor 3 n=2 Tax=Monodopsida...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Transcription factor, GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 174..184 score: 56.15 coord: 190..201 score: 30.01 coord: 226..235 score: 41.85 coord: 104..117 score: 54.54 coord: 154..162 score: 47.07
IPR000795	Transcription factor, GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 101..361 e-value: 2.2E-51 score: 174.2
IPR000795	Transcription factor, GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 100..369 score: 60.499
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 102..237 e-value: 1.8E-21 score: 74.6
IPR004548	Peptide chain release factor 3	TIGRFAM	TIGR00503	TIGR00503	coord: 98..421 e-value: 6.7E-144 score: 478.1
IPR004548	Peptide chain release factor 3	PANTHER	PTHR43556	FAMILY NOT NAMED	coord: 96..422
None	No IPR available	GENE3D	3.40.50.300		coord: 103..419 e-value: 8.0E-88 score: 297.3
None	No IPR available	GENE3D	3.40.50.300		coord: 110..364 e-value: 8.0E-88 score: 297.3
None	No IPR available	PANTHER	PTHR43556:SF3		coord: 96..422
IPR031157	Tr-type G domain, conserved site	PROSITE	PS00301	G_TR_1	coord: 147..162
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 98..362
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 350..421

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1386	contig	Ecto-sp13_S_contig1386:9844..14253 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1386.3017.1	mRNA_Ecto-sp13_S_contig1386.3017.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1386 9835..14253 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1386.3017.1 ID=prot_Ecto-sp13_S_contig1386.3017.1|Name=mRNA_Ecto-sp13_S_contig1386.3017.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp
MNPLDGFGVGGRRAVTRRCIRPRSVLMLSCLVMTSHAFMAPGAQVRAPRQ
DSRCQSTSVELSEAEAEPGIEPLTEPKLAPVAPTTTSKGGQWAATPFEID
RRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWME
LEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVM
LVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIERE
FGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLH
DPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMT
NFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPR
HRDRLAYVRVVSGRYEKGMKAR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000795	TF_GTP-bd_dom
IPR005225	Small_GTP-bd_dom
IPR004548	PrfC
IPR031157	G_TR_CS
IPR027417	P-loop_NTPase
IPR009000	Transl_B-barrel_sf