prot_Ecto-sp13_S_contig1386.3015.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1386.3015.1
Unique Nameprot_Ecto-sp13_S_contig1386.3015.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length274
Homology
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Match: D8LC93_ECTSI (CCHC-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC93_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 2.350e-70
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAGAPMQAVAEESD 111
            MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAGAPMQAVAEESD
Sbjct:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAGAPMQAVAEESD 111          
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Match: A0A835YWX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.460e-48
Identity = 84/98 (85.71%), Postives = 87/98 (88.78%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGG---GADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQ 95
            MPATAGRVRMPH NRVSSSSALKMTGIWTNTIGYDPYAAEGG    A A D  NA+EQAQGLMALAKLSN+GVTE RGACKKCG VGHLTFQCRNH+Q
Sbjct:    1 MPATAGRVRMPHNNRVSSSSALKMTGIWTNTIGYDPYAAEGGEAAAAAAADAENAYEQAQGLMALAKLSNEGVTESRGACKKCGMVGHLTFQCRNHLQ 98          
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Match: A0A2D4C9D1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9D1_PYTIN)

HSP 1 Score: 141 bits (356), Expect = 4.190e-39
Identity = 70/98 (71.43%), Postives = 79/98 (80.61%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVD 98
            MPATAGRVRMPH NR+ SS+ALKMTGIW NTIGYDPYAAEG     +   +++EQA+GLMALAKLSNQG  E RGACKKCG +GHLTFQCRN +   D
Sbjct:    1 MPATAGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAEGEEQQGQVSQSSYEQAKGLMALAKLSNQG-NEVRGACKKCGMLGHLTFQCRNFLDMGD 97          
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Match: A0A2P4YHG3_9STRA (Zinc ion binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHG3_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.020e-37
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPATAGRVRMPH NR+ SS+ALKMTGIW +TIGYDPYAAEG     E    ++EQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSAALKMTGIWKDTIGYDPYAAEG--EKKETSETSYEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 91          
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Match: A0A6A3SK00_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SK00_9STRA)

HSP 1 Score: 138 bits (347), Expect = 9.950e-36
Identity = 69/94 (73.40%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPATAGRVRMPH NR+ SS+ALKMTGIW NTIGYDPYAAE    +  D   +FEQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAEDEKQETSD--TSFEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 91          
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Match: A0A329RX20_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RX20_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.180e-35
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPATAGRVRMPH NR+ SS+ LKMTGIW NTIGYDPYAAEG     E    ++EQA+GLMALAKLSN+  ++ RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSATLKMTGIWKNTIGYDPYAAEGE-QQGETSETSYEQAKGLMALAKLSNKS-SDVRGACKKCGMVGHLTFQCRNHL 92          
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Match: A0A833TGJ4_PHYIN (Zinc knuckle n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TGJ4_PHYIN)

HSP 1 Score: 137 bits (345), Expect = 1.220e-35
Identity = 71/111 (63.96%), Postives = 82/111 (73.87%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAGAPMQAVAEESD 111
            MPATAGRVRMPH NR+ SS+ LKMTGIW NTIGYDPYAAEG     E    + EQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+     G   + ++ +SD
Sbjct:    1 MPATAGRVRMPHNNRMHSSATLKMTGIWKNTIGYDPYAAEGE-QQGETNETSLEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL----GGEEKRVMSSDSD 105          
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Match: A0A0W8C9S2_PHYNI (CAX-interacting protein 4 n=17 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9S2_PHYNI)

HSP 1 Score: 137 bits (345), Expect = 1.460e-35
Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPATAGRVRMPH NR+ SS+ LKMTGIW NTIGYDPYAAEG     E    ++EQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSATLKMTGIWXNTIGYDPYAAEGE-KQGETSETSYEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 92          
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Match: A0A3M6VM93_9STRA (CCHC-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM93_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.560e-35
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPAT+GRVRMPH NR+ SS+ALKMTGIW NTIGYDPYAAE      E    ++EQA+GLM LAKLSN+G ++ RGACKKCG VGHLTFQCRNH+
Sbjct:   15 MPATSGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAED--EKKETTETSYEQAKGLMTLAKLSNKG-SDVRGACKKCGKVGHLTFQCRNHL 105          
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Match: A0A8K1FHX2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHX2_PYTOL)

HSP 1 Score: 135 bits (340), Expect = 7.070e-35
Identity = 68/94 (72.34%), Postives = 78/94 (82.98%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPA+AGRVRMPH NR+ SS+ALKMTGIWTNTIGYDPYAAEG     E   +++EQAQGLMALAKLSN+   + RGACKKCG +GHLTFQCRN +
Sbjct:    1 MPASAGRVRMPHNNRMHSSAALKMTGIWTNTIGYDPYAAEGE-EKKEVSQSSYEQAQGLMALAKLSNKS-NDVRGACKKCGMLGHLTFQCRNFL 92          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1386.3015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC93_ECTSI2.350e-70100.00CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YWX5_9STRA1.460e-4885.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4C9D1_PYTIN4.190e-3971.43Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2P4YHG3_9STRA5.020e-3772.34Zinc ion binding protein n=1 Tax=Phytophthora palm... [more]
A0A6A3SK00_9STRA9.950e-3673.40Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A329RX20_9STRA1.180e-3572.34Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A833TGJ4_PHYIN1.220e-3563.96Zinc knuckle n=1 Tax=Phytophthora infestans TaxID=... [more]
A0A0W8C9S2_PHYNI1.460e-3572.34CAX-interacting protein 4 n=17 Tax=Phytophthora Ta... [more]
A0A3M6VM93_9STRA2.560e-3571.28CCHC-type domain-containing protein n=1 Tax=Perono... [more]
A0A8K1FHX2_PYTOL7.070e-3572.34Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13917zf-CCHC_3coord: 73..95
e-value: 8.3E-8
score: 32.1
NoneNo IPR availablePANTHERPTHR31437FAMILY NOT NAMEDcoord: 1..262
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 77..92
score: 8.598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1386contigEcto-sp13_S_contig1386:573..4937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1386.3015.1mRNA_Ecto-sp13_S_contig1386.3015.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1386 537..6041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1386.3015.1 ID=prot_Ecto-sp13_S_contig1386.3015.1|Name=mRNA_Ecto-sp13_S_contig1386.3015.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEA
NAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAG
APMQAVAEESDSDSDDISSCSSVSDSSDEEDSRRRKRGSGIGATSKGSKG
KEKKSSRASSSSHKDRDRGRDRDGGGGKRKRRREADSSDDEGSNDSDSGS
DVRRKGSGSSKKRRARSGDDFSKDKGKPERRERKEKRRKDREREKSRKSS
SKKSKKDKREKKSKHSKHISRKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC