prot_Ecto-sp13_S_contig13859.3014.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13859.3014.1
Unique Nameprot_Ecto-sp13_S_contig13859.3014.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length601
Homology
BLAST of mRNA_Ecto-sp13_S_contig13859.3014.1 vs. uniprot
Match: D7FRQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ7_ECTSI)

HSP 1 Score: 900 bits (2325), Expect = 0.000e+0
Identity = 471/536 (87.87%), Postives = 483/536 (90.11%), Query Frame = 0
Query:    1 SGAHKSKVKCRVGKRGRRCVRAHPDYGAIILKDDVGVFIGANHESAHLLARYCTGRATSGAAATATPSKASGRSLRREGWVEDAFLVPENPPAGKRPHGTQENRQNTASSGDCRFERTTWFDTDDAGGGASTPSAFPLGESLVGTPPGAVLVIAQSLSFALGVVLSLCEAGADLVVEGSPAVSVVCSPAWWDPVADERAERELAARFPCVRLVKRETECECLLEVGADKADLVCVLSSRPEGEPTTPKTGGGGSDGDVLGDRSRRGQGSDVWAMGVVVDVLGLVPESTRVVVRFDDSARAEQHQVISAHVRRREDERETGRRERVAAESGEEQGEENSFDGRKEETDNASQQHHDA------GMTVEDSVDFGYSARAGVGGVGVYFDDTRGVVREGFDDFFGTMSGYVSGDVVIGDAAELLLLQTMLAPDIQSLMSDVMHLVSRVPIEVLWPEHSPNARGTVVGDNNDSRGDGDTR-SRIRPVTYGEAFRLLLEDRDLLALGLHRPPTHGRGPRKRGGRERWHCPGRSRYVAINS 529
            SG HKS+VKC  GKR RRCVR HPDYG II KDDVGVFI ANHESA LLARYCTGRATSGAAATA PSKASG SLRREGWVE+AFLV ENPP G R HGTQENRQ  ASSGD RFERT W D  DAGGGASTPS FPLGESLVGTPPGAVLVIAQSLSFALGVVLSLCEA  DL VEGSPA+SVVCSP WWDPVADERAERELAARFPCVRLVKRETE ECLLEVGADKADLVCV+SSRPE EPTTPKTGGGG DGDVLGD S RGQGSDVWAMGVVVDVLGLVPESTRVVVRFDDSA AEQHQVISAHVRRRED +ETGRRER AAESGE+QGEEN FDGRKE+TD A+QQ  DA      G TVEDSVDFGYSAR+GVGG GVYFDDTRGVVREGFDDFFGTMSGYVSGDVV+G+AAELLLLQTMLAPDIQSLMSDVMHLVSRVPIEVLWPEHSPNARGT VGDNND+RGDGD R SRIRPVTYGEAFRLLLEDRDLLALGLHRPPTHGRGPRK GGRERW CPG SRYVAINS
Sbjct:  551 SGGHKSRVKCGAGKRRRRCVRVHPDYGTIISKDDVGVFISANHESADLLARYCTGRATSGAAATAAPSKASGTSLRREGWVENAFLVAENPPVGNRQHGTQENRQRNASSGDGRFERTIWSDVHDAGGGASTPSVFPLGESLVGTPPGAVLVIAQSLSFALGVVLSLCEADDDLDVEGSPALSVVCSPTWWDPVADERAERELAARFPCVRLVKRETEYECLLEVGADKADLVCVVSSRPEDEPTTPKTGGGGGDGDVLGDHSGRGQGSDVWAMGVVVDVLGLVPESTRVVVRFDDSASAEQHQVISAHVRRREDAQETGRRERAAAESGEKQGEENLFDGRKEQTDRATQQQRDAPRNENAGTTVEDSVDFGYSARSGVGGGGVYFDDTRGVVREGFDDFFGTMSGYVSGDVVVGNAAELLLLQTMLAPDIQSLMSDVMHLVSRVPIEVLWPEHSPNARGTAVGDNNDNRGDGDIRRSRIRPVTYGEAFRLLLEDRDLLALGLHRPPTHGRGPRKMGGRERWRCPGGSRYVAINS 1086          
BLAST of mRNA_Ecto-sp13_S_contig13859.3014.1 vs. uniprot
Match: A0A6H5L8C5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8C5_9PHAE)

HSP 1 Score: 869 bits (2245), Expect = 2.200e-311
Identity = 459/535 (85.79%), Postives = 472/535 (88.22%), Query Frame = 0
Query:    1 SGAHKSKVKCRVGKRGRRCVRAHPDYGAIILKDDVGVFIGANHESAHLLARYCTGRATSGAAATATPSKASGRSLRREGWVEDAFLVPENPPAGKRPHGTQENRQNTASSGDCRFERTTWFDTDDAGGGASTPSAFPLGESLVGTPPGAVLVIAQSLSFALGVVLSLCEAGADLVVEGSPAVSVVCSPAWWDPVADERAERELAARFPCVRLVKRETECECLLEVGADKADLVCVLSSRPEGEPTTPKTGGGGS-----DGDVLGDRSRRGQGSDVWAMGVVVDVLGLVPESTRVVVRFDDSARAEQHQVISAHVRRREDERETGRRERVAAESGEEQGEENSFDGRKEETDNASQQHHDAGMTVEDSVDFGYSARAGVGGVGVYFDDTRGVVREGFDDFFGTMSGYVSGDVVIGDAAELLLLQTMLAPDIQSLMSDVMHLVSRVPIEVLWPEHSPNARGTVVGDNNDSRGDGDTR-SRIRPVTYGEAFRLLLEDRDLLALGLHRPPTHGRGPRKRGGRERWHCPGRSRYVAINS 529
            SG H  +VKC   KRGR CVR HPDYGAII KDDVGVFI ANHESA LLARYCTGRATSGA AT  PSKASGRSLRREGWV++AFLV ENPPAGKR HGTQENR+ TA S D  FERT W D  DA G A TPS FPLGESLVGTPPGAVLV+AQSLSFALGVVLSLCEAGADL +EGSPA+SVVCSP WWDPVADERAERELAARFP VRLVKRETECECLLEVGADKA L+CV+SSRPE +PTT KTGG        DGDVLGD S RGQGSDVWAMGVVVDVLG V ESTRVVVRFDDSA AEQHQVISAHVRRRE ERETGRRER A ESGEEQGE+NSFDGRKE+TD+ SQQHHDAGMTVEDSVDFGYSARAGVGG GVYFDDTRGVVREGFDDFFGTMSGYVSGDVVIGDAAELLLLQTMLAPDIQ LMSDVMHLVSRVPIEVLWPEHSP AR TVVGDNNDSRGDGD R S IRPVTYGEAFRLLLEDRDLLALGLHRPPTHGRGPRK G RERW CPG SRYVAINS
Sbjct:  102 SGGHMRRVKCGASKRGRCCVRVHPDYGAIISKDDVGVFISANHESADLLARYCTGRATSGAVATTAPSKASGRSLRREGWVKNAFLVAENPPAGKRQHGTQENRRRTALSSDGPFERTIWSDAHDARGDAFTPSIFPLGESLVGTPPGAVLVVAQSLSFALGVVLSLCEAGADLDIEGSPALSVVCSPTWWDPVADERAERELAARFPWVRLVKRETECECLLEVGADKAGLICVVSSRPEDKPTTQKTGGXXXXXXXXDGDVLGDHSGRGQGSDVWAMGVVVDVLGSVSESTRVVVRFDDSASAEQHQVISAHVRRREHERETGRRERAATESGEEQGEDNSFDGRKEQTDDPSQQHHDAGMTVEDSVDFGYSARAGVGGGGVYFDDTRGVVREGFDDFFGTMSGYVSGDVVIGDAAELLLLQTMLAPDIQLLMSDVMHLVSRVPIEVLWPEHSPKARETVVGDNNDSRGDGDIRRSWIRPVTYGEAFRLLLEDRDLLALGLHRPPTHGRGPRKTGRRERWRCPGGSRYVAINS 636          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13859.3014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRQ7_ECTSI0.000e+087.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8C5_9PHAE2.200e-31185.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13859contigEcto-sp13_S_contig13859:188..3103 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13859.3014.1mRNA_Ecto-sp13_S_contig13859.3014.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13859 188..3105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13859.3014.1 ID=prot_Ecto-sp13_S_contig13859.3014.1|Name=mRNA_Ecto-sp13_S_contig13859.3014.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=601bp
SGAHKSKVKCRVGKRGRRCVRAHPDYGAIILKDDVGVFIGANHESAHLLA
RYCTGRATSGAAATATPSKASGRSLRREGWVEDAFLVPENPPAGKRPHGT
QENRQNTASSGDCRFERTTWFDTDDAGGGASTPSAFPLGESLVGTPPGAV
LVIAQSLSFALGVVLSLCEAGADLVVEGSPAVSVVCSPAWWDPVADERAE
RELAARFPCVRLVKRETECECLLEVGADKADLVCVLSSRPEGEPTTPKTG
GGGSDGDVLGDRSRRGQGSDVWAMGVVVDVLGLVPESTRVVVRFDDSARA
EQHQVISAHVRRREDERETGRRERVAAESGEEQGEENSFDGRKEETDNAS
QQHHDAGMTVEDSVDFGYSARAGVGGVGVYFDDTRGVVREGFDDFFGTMS
GYVSGDVVIGDAAELLLLQTMLAPDIQSLMSDVMHLVSRVPIEVLWPEHS
PNARGTVVGDNNDSRGDGDTRSRIRPVTYGEAFRLLLEDRDLLALGLHRP
PTHGRGPRKRGGRERWHCPGRSRYVAINSLVRALPFETATASSSCDDGAD
RSAHSTQSPRSILRILVPVCHSAVVPPPPLRQPPLTSLKRRPRLGRTRRK
D
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