prot_Ecto-sp13_S_contig10299.301.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10299.301.1
Unique Nameprot_Ecto-sp13_S_contig10299.301.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length184
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10299.301.1 vs. uniprot
Match: A0A6H5JU27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU27_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 7.820e-65
Identity = 160/183 (87.43%), Postives = 162/183 (88.52%), Query Frame = 0 
Query:    1 MLSSAGQDKKAHVAFAGTSNNVHPSVDTGTGGIGXXXXXXXXXXXXXXXXGIGEIGLRSSPGSHSPIHPRRDAGGGSSGYPGLVPAEAESAPPGVVEMEPAPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRLGGGDGGMRPAVPDAGPEMDEMRPSPGDGTGAPGPWMS 183
            MLSSAGQDKKAHVAFAGTS+NVHPSVDTGTGGIG                GIGE+GLRSS GSHSPIHPRRDAGGGSSGY GLVPAEAESAPPGVVEMEPA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRLGGGDGGMRPAVPDAGPEMDEMRPSPGDGTGAPGPWMS
Sbjct:  546 MLSSAGQDKKAHVAFAGTSSNVHPSVDTGTGGIGGAAPSFPAYRGMAGSSGIGEMGLRSSSGSHSPIHPRRDAGGGSSGYSGLVPAEAESAPPGVVEMEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRLGGGDGGMRPAVPDAGPEMDEMRPSPGDGTGAPGPWMS 728
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BLAST of mRNA_Ecto-sp13_S_contig10299.301.1 vs. uniprot
Match: D8LRF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF6_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 8.410e-65
Identity = 140/183 (76.50%), Postives = 142/183 (77.60%), Query Frame = 0 
Query:    1 MLSSAGQDKKAHVAFAGTSNNVHPSVDTGTGGIGXXXXXXXXXXXXXXXXGIGEIGLRSSPGSHSPIHPRRDAGGGSSGYPGLVPAEAESAPPGVVEMEPAPPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRLGGGDGGMRPAVPDAGPEMDEMRPSPGDGTGAPGPWMS 183
            MLSSAGQDKKAHVAFAGTS+NVHP VDTGTGGIG                GIGE+GLRSS GSHSPIHPRRD GGGS GYPGLVPAEAESAPPGVVEMEPAPPL    XXXXXXXXXX       XX    X    XXXXXX RRLGGGDGGMRPAVPDAGPEMDEMRPSPGDGTGA GPWMS
Sbjct:  396 MLSSAGQDKKAHVAFAGTSSNVHPPVDTGTGGIGGAAPSFPVYRGTAGSSGIGEMGLRSSSGSHSPIHPRRDGGGGS-GYPGLVPAEAESAPPGVVEMEPAPPLPVAGXXXXXXXXXXVRKKRAKXXSSKSXRDGGXXXXXXXRRLGGGDGGMRPAVPDAGPEMDEMRPSPGDGTGAAGPWMS 577
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10299.301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JU27_9PHAE7.820e-6587.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRF6_ECTSI8.410e-6576.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10299contigEcto-sp13_S_contig10299:3060..3611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10299.301.1mRNA_Ecto-sp13_S_contig10299.301.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10299 2998..3657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10299.301.1 ID=prot_Ecto-sp13_S_contig10299.301.1|Name=mRNA_Ecto-sp13_S_contig10299.301.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=184bp
MLSSAGQDKKAHVAFAGTSNNVHPSVDTGTGGIGGAAPSFPAYRGTAGSS
GIGEIGLRSSPGSHSPIHPRRDAGGGSSGYPGLVPAEAESAPPGVVEMEP
APPLPVAGGDGGGGEGDGARKKRAKKRSSKSRRDRGRGRSSSSRRLGGGD
GGMRPAVPDAGPEMDEMRPSPGDGTGAPGPWMS*
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