prot_Ecto-sp13_S_contig13848.3007.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13848.3007.1
Unique Nameprot_Ecto-sp13_S_contig13848.3007.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length493
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13848.3007.1 vs. uniprot
Match: D7G5T8_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5T8_ECTSI)

HSP 1 Score: 890 bits (2300), Expect = 0.000e+0
Identity = 479/493 (97.16%), Postives = 486/493 (98.58%), Query Frame = 0 
Query:    1 QPHLRPVLSLTDKKRYPMGSGKALYLSHSQGDHLEKRWVPGDPPKTASVDVASKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVIAKQASAAGEAADLYATARAFLMENPEFQHIWVSAACMPPRLREQKWRGAVPSAAGSNMFEHFHPGALLACDAVLVAPPERESMSYIAEQRARYSDLEMYSTSPWKALEGVITQLMNSVSFYAFRLGKKLIFAGPYPAYPEEPQPSPLDLRRGSAPASIVGADSPVGGRMATESPVDRAKAAAKLMFSKGTRMGWNSKSDISAGDSLEDGRWNDWDGGGGRSTAGSTPTASVTTASVSDFSGGRSFYGGWGDVSRRRRSTPPQGSRIERAVAEALDRLGINGTHSPPERNWRGVLQPCFVLKKTRQDVEKYSDAQGALKQAMCSLSVSIDQAEEFFLVWRDLASIGPSASNDRLAVLNLLVFAVSVADGYCCPRRPSDFVGRVLAESLVTPGHLDLWMKDLSPDDSR 493
            +PHLRPVLSLTDKKRYPMGSGKALYLSHSQGDHLEKRWVPGDPPKTASVDVASKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVIAKQASAAGEAADLYATARAFLMENPEFQHIWVSAACMPPRLREQKWRGAVPSAAGSNMFEH HPGAL+ACDAVLVAPPERESMSYIAEQRARYSDLEMYSTSPWKALEGVI QLMNSVSFYAFRLGKKLIFAGPYPAYPEEPQPSPLDLRRGSAPASIVGADSPVGGRMATESPVDRAKAAAKLMFSKGTRMGWNSKSD+SAGDSLEDGRWN WDGGGGRSTAGSTPTASVTTASVSDFSGGRSFYGG GDVSRRRRSTP +GSRIERAVAEALDRLGINGTHSPPERNWRGVLQPCFVL+KTRQDVEKYSDAQGALKQAMCSLSVSIDQAEEFFLVW+ LAS+GP ASNDRLAVLNLLVFAVSVADGYCCPRRPSDFVGRVLAESLVTPGHLDLWMKDLSPDDSR
Sbjct:    8 KPHLRPVLSLTDKKRYPMGSGKALYLSHSQGDHLEKRWVPGDPPKTASVDVASKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVIAKQASAAGEAADLYATARAFLMENPEFQHIWVSAACMPPRLREQKWRGAVPSAAGSNMFEHLHPGALVACDAVLVAPPERESMSYIAEQRARYSDLEMYSTSPWKALEGVIMQLMNSVSFYAFRLGKKLIFAGPYPAYPEEPQPSPLDLRRGSAPASIVGADSPVGGRMATESPVDRAKAAAKLMFSKGTRMGWNSKSDMSAGDSLEDGRWNGWDGGGGRSTAGSTPTASVTTASVSDFSGGRSFYGGGGDVSRRRRSTPTEGSRIERAVAEALDRLGINGTHSPPERNWRGVLQPCFVLRKTRQDVEKYSDAQGALKQAMCSLSVSIDQAEEFFLVWKYLASLGPCASNDRLAVLNLLVFAVSVADGYCCPRRPSDFVGRVLAESLVTPGHLDLWMKDLSPDDSR 500
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BLAST of mRNA_Ecto-sp13_S_contig13848.3007.1 vs. uniprot
Match: A0A835Z0E5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0E5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.160e-7
Identity = 50/138 (36.23%), Postives = 63/138 (45.65%), Query Frame = 0 
Query:  365 GINGT--------HSPPERNWRGVLQPCFVLKKTRQDVEKYSDAQGALKQAMCSLSVSIDQAEEFFLVWRDLASIGPSASND---RLAVLNLLVFAVSVADGYCCPRRPSDFVGRVLAESL--VTPGH-----LDLWM 484
            GIN T          P  +NW        ++   R+DV     A GAL+QA+CS+SV+  QA EF   W  L     +A  D   RLAVLNLL F V+  +    P R   +    L ESL  +  G      LDLWM
Sbjct:  266 GINETIDAYALCYEDPVRKNWEHANLQNTLMDCVRKDVSGLCQAGGALRQAICSMSVTQPQAVEFTRTWHALLEGRWNACADKAERLAVLNLLHFGVAFFERRIAPPRAPGYAEATLLESLDAIPEGEGGGLALDLWM 403
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13848.3007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5T8_ECTSI0.000e+097.16Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A835Z0E5_9STRA1.160e-736.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13848contigEcto-sp13_S_contig13848:312..3581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13848.3007.1mRNA_Ecto-sp13_S_contig13848.3007.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13848 312..3581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13848.3007.1 ID=prot_Ecto-sp13_S_contig13848.3007.1|Name=mRNA_Ecto-sp13_S_contig13848.3007.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=493bp
QPHLRPVLSLTDKKRYPMGSGKALYLSHSQGDHLEKRWVPGDPPKTASVD
VASKAAAAAAVAAGGAVAVAVAAAAAGAAQAAAGAVIAKQASAAGEAADL
YATARAFLMENPEFQHIWVSAACMPPRLREQKWRGAVPSAAGSNMFEHFH
PGALLACDAVLVAPPERESMSYIAEQRARYSDLEMYSTSPWKALEGVITQ
LMNSVSFYAFRLGKKLIFAGPYPAYPEEPQPSPLDLRRGSAPASIVGADS
PVGGRMATESPVDRAKAAAKLMFSKGTRMGWNSKSDISAGDSLEDGRWND
WDGGGGRSTAGSTPTASVTTASVSDFSGGRSFYGGWGDVSRRRRSTPPQG
SRIERAVAEALDRLGINGTHSPPERNWRGVLQPCFVLKKTRQDVEKYSDA
QGALKQAMCSLSVSIDQAEEFFLVWRDLASIGPSASNDRLAVLNLLVFAV
SVADGYCCPRRPSDFVGRVLAESLVTPGHLDLWMKDLSPDDSR
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