mRNA_Ecto-sp13_S_contig1384.3002.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig1384.3002.1
Unique Name	mRNA_Ecto-sp13_S_contig1384.3002.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 6.110e-119
Identity = 204/356 (57.30%), Postives = 215/356 (60.39%), Query Frame = 1

Query:    1 MIPVDTWEATVGEETTYEWSFDVIKVASS-----FIYPFDFKEIGP--YTTFLSGGAGAAVIATVTAGDAAGNTDSCSFLMMLWPRG-------------------------------------------------------------------------------------------------------------KGDDDNAEFVEAGSKTTVGVTASAYDDRPGEGAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPNGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDRDDWISLLEVRFMVDP 720
            MI ++TW+ATVGE  T  WSFDVI          ++YPF   + G   YT  L GGAG  VIATVTA DAAGNTDSCSFLMMLWP G                                                                                                             + DD+NAEFVEAGSKTTVGVTA+AYDDRPGE AGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVP+GGQCEI+FTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTV MESVGIDRDDWISLLEVRFMVDP
Sbjct:   47 MIRLNTWKATVGEAETAVWSFDVINAVDGSNVIDYLYPFHIGQSGSDLYTISLMGGAGTEVIATVTAFDAAGNTDSCSFLMMLWPEGTPLPTDEPVSTXXXXPEPVAPXXXXXXXXXXXXXXGWVQTPVPAASTTPEPVVIPPTAGPSTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVSPATAQPVSPPEEEDDNNAEFVEAGSKTTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVTMESVGIDRDDWISLLEVRFMVDP 402

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BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 9.200e-79
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 1

Query:  361 MGCLPDLAHDGVGEEDTESRWSCAEEIVPNGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDRDDWISLLEVRFMVDP 720
            MGCLPDLAHDGVGEEDTESRWSCAEEIVP+GGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGID DDWISLLEVRFMVDP
Sbjct:    1 MGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDADDWISLLEVRFMVDP 120

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BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 2.470e-57
Identity = 98/173 (56.65%), Postives = 128/173 (73.99%), Query Frame = 1

Query:  202 DSCSFLMMLWPRGKGDDDNAEFVEAGSKTTVGVTASAYDDRPGEGAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPNGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDRDDWISLLEVRFMVDP 720
            DSC +L        GD D+ E V A + T +  +A+ +D+RPG+ +GD GCG+ GCLP LA DG+  +D ESRWSCAE+IVP+GGQCEI FTF  PQ++  +QV FWKG+ERTRTLKVKING+K GE++S+PGS  + F +    VHTV +ES+G+D D+WISLLEV FMV+P
Sbjct:  178 DSCHYLC-------GDMDH-ELVNAATITAIAASATGFDERPGQASGDHGCGKYGCLPVLATDGI-TDDVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKINGEKFGEFDSHPGSVTSYFDVIAYDVHTVTLESLGLDTDEWISLLEVIFMVEP 341

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BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Match: D7G3F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F6_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 7.950e-47
Identity = 83/154 (53.90%), Postives = 104/154 (67.53%), Query Frame = 1

Query:  268 VEAGSKTTVGVTASAYDDRPGEGAGDVGCGEMG---CLPDLAHDGVGEEDTESRWSCAEEIVPNGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDRDDWISLLEVRFMVDP 720
            VE G+KT V V+A+A+D RPG  +GDVGCGE G   C P    DG+  E  ESRWSCA +IVP GG C+I + F  PQDI D+QVAFWKGDER RTL+V  +G     +ESY GSTFN  G+   G+ +V +ESV +  ++WISL+EV   V P
Sbjct:   73 VEVGTKTDVSVSATAHDTRPGSSSGDVGCGEAGGNGCTPANTRDGISNE-AESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIQVAFWKGDERVRTLEVYFDGTLYRTHESYAGSTFNPLGVSATGISSVMLESVDLLENEWISLIEVLIFVSP 225

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BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 6.690e-45
Identity = 81/154 (52.60%), Postives = 104/154 (67.53%), Query Frame = 1

Query:  268 VEAGSKTTVGVTASAYDDRPGEGAGDVGCGE---MGCLPDLAHDGVGEEDTESRWSCAEEIVPNGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDRDDWISLLEVRFMVDP 720
            VE G+K  VGV+A+A+D RPG  +GDVGCGE   +GC      DG+  E  ESRWSCA ++VP+ G C+I FTF  PQ I D+QVAFWKG++RTRTL V +NG+    +ESY  STFN+ G+  N   TV +ES  +  D+WISL+EV   V P
Sbjct:   21 VEVGTKIEVGVSATAHDTRPGNSSGDVGCGEVGGLGCTATNTRDGIFSE-IESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESYTDSTFNTLGVTANEASTVMLESTALLSDEWISLIEVLIFVTP 173

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BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.960e-42
Identity = 83/148 (56.08%), Postives = 103/148 (69.59%), Query Frame = 1

Query:  268 VEAGSKTTVGVTASAYDDRPGEGAGDVGCGEMG---CLPDLAHDGVGEEDTESRWSCAEEIVPNGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDRDDWISLLEV 702
            VE G+KT V V+A+AYD RPG  +GDVGCGE G   C P    DG+  E TESRWSCA +IVP GG C+I + F  PQDI D++VAFW GDER RTL+V  +G     +ESY GSTFNS G+   G+ TV +ESV +  ++WISL+EV
Sbjct:  479 VEVGTKTDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNE-TESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEV 625

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BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Match: D7FI90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI90_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.390e-41
Identity = 80/173 (46.24%), Postives = 106/173 (61.27%), Query Frame = 1

Query:  211 SFLMMLWPRGKGDDDNAEFVEAGSKTTVGVTASAYDDRPGEGAGDVGCGE---MGCLPDLAHDGVGEEDTESRWSCAEEIVPNGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDRDDWISLLEVRFMVDP 720
            S+  + W   +      + VE G+KT VGV+A+A+D RPG    DVGCGE   +GC      DG+   D ESRWSCA  +VP+ G C+I FTF  PQ+I D+QVAFW  +ER  TL+V +NG+    +ESY   TFN+ G+      TV +ESV +  D+WISLLEV+  V P
Sbjct:    2 SYEFLSWEETESLPTVVDAVEVGTKTEVGVSATAHDVRPGSSGNDVGCGEVGSLGCTATNTRDGI-VSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYD-DTFNTLGVTATEASTVMLESVALLSDEWISLLEVQIFVTP 172

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BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.770e-40
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 1

Query:  268 VEAGSKTTVGVTASAYDDRPGEGAGDVGCGE---MGCLPDLAHDGVGEEDTESRWSCAEEIVPNGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDRDDWISLLEVRFMVDP 720
            VE G+KT VGV+++A+D RPG  +GD GCGE   +GC      DG+  E  ESRWSCA ++V + G C+I FTF  PQ I D+QVAFWKG+ERTRTL+V ING+    +ESY  +TFN+ G+    V TV +ESV +  D+WISL+EV   V P
Sbjct:  363 VEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSE-IESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFVTP 515

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BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 3.130e-40
Identity = 77/154 (50.00%), Postives = 106/154 (68.83%), Query Frame = 1

Query:  268 VEAGSKTTVGVTASAYDDRPGEGAGDVGCGEMG---CLPDLAHDGVGEEDTESRWSCAEEIVPNGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDRDDWISLLEVRFMVDP 720
            VE G+KT V V+A+A+D R G  +G+VGCGE G   C  + A DG+  E  ESRWSCA +++ + G C+I F+F  PQ+I D+QVAFWKG+ER RTL+V +NG+    +ESY  STFN+ G+  N  +TV +ESV +  ++WISL+EV   V P
Sbjct:  154 VEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTE-IESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEVLIFVTP 306

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BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Match: D7FI81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI81_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 3.370e-40
Identity = 79/151 (52.32%), Postives = 102/151 (67.55%), Query Frame = 1

Query:  271 EAGSKTTVGVTASAYDDRPGEGAGDVGCGEMG---CLPDLAHDGVGEEDTESRWSCAEEIVPNGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDRDDWISLLEVRFMV 714
            E G+ T V V+A+A+D RPG  +GDVGCGE G   C    AHDG+  E  ESRWSCA  +VP+ G C+I F+F  PQDI D+QVAFW+G+ERTRT+ + I+G+    +ESY  STFN+ G+      TV +ESV +  D+WISLLEV   V
Sbjct:  158 EVGTMTEVNVSATAHDTRPGSSSGDVGCGETGGDGCAAIKAHDGIISE-IESRWSCATMLVPDEGPCQIEFSFADPQDIVDIQVAFWEGNERTRTVDIFIDGELTHTHESYADSTFNTLGVTATEASTVMLESVDLLSDEWISLLEVLIFV 307

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1384.3002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J8U9_9PHAE	6.110e-119	57.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LCQ5_ECTSI	9.200e-79	98.33	Uncharacterized protein n=2 Tax=Ectocarpus silicul...	[more]
A0A6H5JFX1_9PHAE	2.470e-57	56.65	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D7G3F6_ECTSI	7.950e-47	53.90	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FI77_ECTSI	6.690e-45	52.60	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JTT4_9PHAE	1.960e-42	56.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FI90_ECTSI	1.390e-41	46.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G3F4_ECTSI	1.770e-40	52.60	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G0S3_ECTSI	3.130e-40	50.00	LNR domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7FI81_ECTSI	3.370e-40	52.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1384	contig	Ecto-sp13_S_contig1384:10451..17298 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	94.7
Seed ortholog evalue	6.1e-17
Seed eggNOG ortholog	2880.D7FL48
Model size	1602
Hectar predicted targeting category	other localisation
Exons	4
EggNOG free text desc.	regulation of response to stimulus
EggNOG OGs	COG4886@1,KOG0619@2759
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-03_002000.1
Cds size	723
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462738.263611-CDS-Ecto-sp13_S_contig1384:10450..10691	1681462738.263611-CDS-Ecto-sp13_S_contig1384:10450..10691	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1384 10451..10691 +
1681462738.2768261-CDS-Ecto-sp13_S_contig1384:14635..14946	1681462738.2768261-CDS-Ecto-sp13_S_contig1384:14635..14946	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1384 14636..14946 +
1681462738.285053-CDS-Ecto-sp13_S_contig1384:15922..16069	1681462738.285053-CDS-Ecto-sp13_S_contig1384:15922..16069	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1384 15923..16069 +
1681462738.2947245-CDS-Ecto-sp13_S_contig1384:16395..16419	1681462738.2947245-CDS-Ecto-sp13_S_contig1384:16395..16419	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1384 16396..16419 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462738.304898-UTR-Ecto-sp13_S_contig1384:16419..17298	1681462738.304898-UTR-Ecto-sp13_S_contig1384:16419..17298	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig1384 16420..17298 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1384.3002.1	prot_Ecto-sp13_S_contig1384.3002.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig1384 10451..16419 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig1384:10451..17298+
coding sequence from alignment at Ecto-sp13_S_contig1384:10451..17298+

protein sequence of mRNA_Ecto-sp13_S_contig1384.3002.1

>prot_Ecto-sp13_S_contig1384.3002.1 ID=prot_Ecto-sp13_S_contig1384.3002.1|Name=mRNA_Ecto-sp13_S_contig1384.3002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=241bp
MIPVDTWEATVGEETTYEWSFDVIKVASSFIYPFDFKEIGPYTTFLSGGA
GAAVIATVTAGDAAGNTDSCSFLMMLWPRGKGDDDNAEFVEAGSKTTVGV
TASAYDDRPGEGAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPN
GGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPG
STFNSFGIQENGVHTVAMESVGIDRDDWISLLEVRFMVDP*

mRNA from alignment at Ecto-sp13_S_contig1384:10451..17298+

Legend: CDSpolypeptideUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig1384.3002.1 ID=mRNA_Ecto-sp13_S_contig1384.3002.1|Name=mRNA_Ecto-sp13_S_contig1384.3002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6848bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1384:10451..17298+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATTCCCGTGGACACCTGGGAGGCCACTGTCGGGGAAGAAACAACGTA
CGAATGGAGTTTCGACGTGATCAAGGTGGCCTCGTCCTTCATCTACCCCT
TCGACTTTAAGGAAATTGGCCCTTACACCACCTTCCTGTCGGGCGGAGCT
GGTGCTGCGGTAATCGCCACCGTCACCGCCGGCGATGCGGCGGGCAACAC
GGACAGCTGCTCTTTTTTGATGATGCTATGGCCAAGAGGAAGTGAGTTGA
AGAAACGATCGAGAAATTATGTATGTAGTAATTCGAAGCACATACTGCCC
CGGTTTGCCAGACTCCACGAGAAATGGAAGGCCAATGTAGCCGAGTTGGA
ATGACTCGCAGTGTCCCGGGGTGAGGCAGACTCAGCCAATCAGTCGCAGT
TTGGCGGGATAGATCCGACATCGCGAAGTTCCGCCACAATGTACGTTCAG
GATAAGGAAGCACCGACGCAAATGATTGCGTAGGGAACACTCAGCATTGA
TCCTTTGTTTTCGTTCCGAGACGCCTGCCGCGTACTCAAATTTGCGACAG
ACAACATCAGCGTGAACGGATGCACACATCTCCATTTTTTGGGTTGCTTT
GGCTTGTTCCATCGTACGCACTCGACCCCACCAATAATTTCAGCTTCGCG
TACCGCCTCGATATCGTTGTCACCTGATGTTATTCGACTCCGTCCAGCTC
CGCTTCCTACCGACGAGCCTGTGCCTACCCCACCGCCCACGCCGCAGCCG
GTAAGCCCTACTGAAACCTACGATTCAACCTAGTGTTAAAATGCATCTAT
CACTTGTCGCAGGCAAGAAGTACACAGCTTTTGAGTCAGCGTGCGTCGGA
TAGATTTCTGCGTCTTGGTGCTACTTTGAACACGCAAAGATATTCTCTGT
GGGGGACGATGCCATCAGGTGGTAAAAGCGTTTCAATGTTTGGCAACCCG
GCCAGGCACCCTCCTCACTTCGGGTCATAGCCTGCGAGGTACTCGTCTTG
ACTTGCTGGAAGACACCCACATACATGTGGTGGTTGCGAATACATCGACC
ACGCGCCGGTTCTTCTCCCAATGTTTATGACACTCACCCTTGCGCACTTT
CGGAACATCCATCTACAGACTACGCTTAGATCTACATTCGATTGTGTTTG
GGGTTTGTTGAATCTGCAACACCACCGCTTCACACGACGACCGTAGCTTG
CATTGCAACAATGTGGGTAACAATTTGCGACGTCAGAGAGTCCTTCGGAA
CAACATTTCGTCGCAGCCACTGCCGATTTCTTTCATTCCAACGAGAGTAT
TCGGTATATTAATTGGCGGACAGAGTTTGATAGTGTTATGCGGCGGACAA
TGATCTGAAACACACAACAAGTGATATTCGGAAACCTCTCTCCCACAGTG
CACTCCCAGGTCCCCGCGTTGAAATCCTCGTGAATACAGCACATAGTTTG
CACTTCTATATTCGACGTGAGCCGCAGACGGTTTGGAACCACCAAGTACA
TGTGACGCGCACGAACACATGAGGACCGAAGACGGTTGATACACGTTCAT
CTTCATCCCGAAATTTGCCAACGGGCTTGACACACGCGAGGCTTCACATT
TACAGTGCGAACAATTCATAGATCTATGGAGCACATGACAGCTCCGACAG
GGATGGGTACACACCCGGACGAAAGGTGTTGTGTGCTTACCGTCCGCATC
ATTCAGTACATACCCCCCCATTTCCGTTTGAGCTTGCGGAGCAGTCACAA
GTCATGATCCTGAGGCGAGGCTCCAGCAAACAGGTTTACAGGTCAAACCC
AGTGACAAATAAACTCCTGGTGTAATATGTTTGTTTCTGGTTGGCTTTGC
CAACGTTCAAATGTATCAAGATTGCTGCAAAATAAAGAAATCGAAATGAG
AGGGGAAGAAGAACGCCACAACATCCACACTTGGGATCTATGGTGGTGTA
CGTTCGGGTAACCCCTTAGTCTGTTGGTTCTGATTCCGCTTTGGTGACAA
TATGTTTCTTGTTGGCTTCGTCAACGTTAAGATAAGTGTGTCAAGATTGC
TACAAAATGAAGCACCCGAGGTGAGACGGGATGAAAAACGCAACAAAATC
CCAACTTGCGTAGTATCGTGGGGTGGTGTCGATCAAATAATGTTTGGTTC
TGATTCCGGTATGGGCAACGCGATGAGTGACGGAACTGATCGTCGACGAT
ACTTATTTTCTTCCAAGAAACAAGGAAGTCTTCTTGGAAGCGCGCGGGGG
TGGGGCGCTGCTGTGGACAAGGCATTGACGAATTTGAAGTGAACTTGGGT
ATCGTACTCCGAAATATTTCGAATCGAACGCCACCTGCCCCGTGCATGAA
GTTCGACCTAGTCCTGAACGTAAGACAGTATTGATGCAAGTTCATAGGTC
AAGGAGCAGGCTCAGCCGCCTGCATCCGCTCCATTTGGCAGTTTCCACGA
GAATTTCAGAGGAGGACGATCCAAACATTTCGACAATCCGCAACGAGATG
CTGCATGCACCACACCGGGCGCAATAGATTTTACTGTCCAATAGTCGCCG
CAACCTTCGCCTCGGTTTCTCGTCGTGGCTTTGTAGGTCCCTTTTCTGCA
CGCTCCTCAGGTTCCCTCGACACCCGAACCCGCGTCCCACCCCCGAACTG
GTATACCTCTAGACGGTATTCTTCCATTGTACGGAAACCAGTAGCACCCA
ACCCACGTTGGGAGTTTGACGGAGAACTGCAATACCTTCGTGTGCGTGCA
GTTCCCTCAAGCAGGACTACACGATACATTGTCATGAACCTAAGCTATTG
ACGCCATTATTCTCTCCATCCTCTCTGTGTGCTGTTTTCAATGCTTTCAG
GTCGCGCCGACTCCCGCGCCCATCGCACTTACCCCTGGACCGGTACGTAA
TGACGTCGAAGCAGACAGAGTGCCAAACGTGACTTGCTTCGGCCTGAAGG
ACGAATCAGTCTGTTGTGCAGAACAGGAGCTGTTGCCCTTTCGGGACGTT
CGCCGGGGCGTGATGTTGAATCTGTCGTACGTACTTTCGATGAGCAGAAC
AACCGACGAATGCATTTGATGATCTTTCACCTTTCTGTATCCTGACTTCG
AGTACGTGGAAGATAGCTTGTGAATTCACCAGACCTCACTAGCGCGAGCC
CCAGCCAGGTTTGACCGCAAAAATAGCTCTCCATGTTTTGCCGTTTCAAT
ACGCTCAATGCTGTCAGGTCGCGCCGACTCCCGTGCCCATCGTGCCTACC
CCTGAGCCGGTATGTAATGACGTCAAAGCAGACAAACTGCGAAACGTACT
GTATCTTGCTTCGGCCTAAAGGACGAATCGGCTTATTATGCAGAACAGGA
GCTGTTGCCCTTTCGTGACGGTCGTGGCGGCGTGATGTTGAATCTGTCGT
GCGTGCTTTCGACGAGTAGAACAACCGAATGAAGGCATTAATGATTTTTC
ACCTTTCTGTATCCCGACTTCGAGTACGTGGAGGAAATAGCCCGTGATTC
ACAAGGCCTCACCAGCATAAATCCCACTCCCCTTCGGTCGCAACATTAGC
TCTCCATGTTTTGCCGTTTCAATACGCTCAATGCTGCCAGGTCGCGCCGA
CTCCCGCGCCCATCGTGCCTACCCCTGAGCCGGTATGTAATGACGTCAAA
GCAGACAAACTGCGAAACGTACTGTATCTTGCTTCGGCCTAGGACGAATC
GGCTTATTATGCAGAACACGAGCTGTTGCCCTTTCGGGACGGTCGCGGCG
GCGTGATGTTGAATCTGTCGTACGCACTTTCGACGAGCAGAACAAAAGAA
CGAAGGCATATAATGTGTTGTCACCTTTCTGTATCCCGACTTTGAATACG
TGGAGGAAATGCTTTGTGCTTCACAAAACCTCACCAGCGTGAGCCCCACT
CCCCGTTTGGTCGCGAATTTGTCTCTGCATGTTTTGCCGTCTAAATACGC
GCTTGTCAGGTTGTCCCGGTCTGGTACCAGACGCCCGTGCCGGCGGCACC
CACCCCCGAGCCGGTTGTCGTTCCCCCTACCGCCAGCCCTTCGACGGTCC
CGGCCACCTCCCCTCCGATCAGCCCTCCGTCAGCCGAGCCTAGTGCGGCC
CCTGTGACTCCTGCCCCGACGGAGGAGCCCACGTCGTCCCCCATCGCCGT
CAGCCCCCCTACTACACCGGTTTCCCTTCCTGCAGAAGGTGATGACGACA
ACGCCGAGTTCGTCGAGGCCGGGAGCAAGACCACCGTCGGCGTCACCGCC
AGCGCCTACGACGACCGCCCGGGGGAGGGCGCGGGGGACGTCGGCTGCGG
AGAGATGGGTTGCCTTCCTGATCTCGCCCACGACGGCGTCGGCGAGGAGG
ACACGGAGTCGAGGTGGTCGTGCGCCGAGGAGATCGTGCCCAACGGAGGC
CAGTGCGAGATCACCTTCACGTTCGACAGCCCCCAAGACATCACCGACGT
GCAGGTTGCCTTCTGGAAGGGAGACGAGCGCACTCGCACTCTCAAGGTGA
AAAATCGACAATGATGGCCCCATGGTGGGATGGAAAAAAGCATGCTATAG
CTACATTGACGTGCCGAAACCAAGTCAACGAAAACGGATCTAGATAATAA
ATGTTGTCCATCGCTTGATGATTGGGAGTAGACGCGCCTAGATTTTGTCC
CCGCCCCCTGTGATAGGAATGCGTCCTCGGGTCGACGTGGCCGCGGCGCT
GAAACATGCGCCACACATCGTGTAAGCAAGATTGAAGGTGTGCTGGTTCT
TGTTAGTTGCTGATGCGGCTAAGGCAAAAGTCTAGTTGCTTTTGGTTGTA
ATGTGGGTCCCCTGGTACGGGGAAATTTCGCCCATGGAGCCTATGATTTG
TGGTACGACGATACAATACTCCACGCAGCTCGCTCTTCACGCCGTACGTC
GGCTCAAGGTATCATACGTGCTTGGTGCCAAGTAGTGTCTTCCGGTTGGA
GGACTGGACACGATTCGTCCTGACGCTTGACGGATGCGAGGTCTATCATC
AAGTGACCACCGAAGGCTGGCTGTAGGAGTTGACAGGATACATACACTGG
TGGCCCTAGGTGCTGTTGGTCTCTTGTGGTCCTAGATGCTATTGGTCTCT
CGATTCCTCTTGGTACGCCGGGTCCGGCTGGTGCCTCTGTTGTTTGAGCA
AAGGTGCTCCCTCCTCGCCCTGCTTCTTCCCAAGAAAAGCGCATGTGGTC
CATCCCTCTGATGTTTGATTGTGCGGGTGCCGCCTGTTCTATTGGCGGCT
TCACATCCGTCGTGCAACCGCTTCCACATCCCCGACGCACCACAAAGCCA
ACAAGGCGGGGCGCTAAGCAACCATCTGTGCCTTAGCAGACTTTTCCAAC
CACGGCGCAGCTTGTTCGCGACAATACCGGTTGAAAGAAGCCAGAGCGCT
CAATACCTGATATATATCCATGTGTATAATAATGCGTCACCACCATCCGA
ACCGCCCTCCCCGGAACTGCAGGTGAAGATAAACGGCGACAAGATCGGCG
AGTACGAGTCCTACCCCGGATCTACCTTCAACTCGTTCGGGATCCAAGAG
AACGGCGTGCACACCGTTGCCATGGAGTCCGTTGGCATCGACAGGGACGA
CTGGATCAGCCTGCTCGAGGTGCCAGAGCAGGCATTGCAGTAGATTCTTG
TCAGGACCGGTAGAAAAGTGGTCGCCAGCGCAGACGATCAGATTTCTCGC
CGTTTGGCCATTCGGAGCGCTCTCCAAAACGACGTAGACGTCTGTTGACG
CTCAAGAGGACAATTAGGCGCGCCCAATACCCCCCTTTTGCCATGATGCT
CGGCACCACCAAATATAGTGTTCGCCTTCCTGCGTTTGGTCGCGAGTGAA
CAGTTTGGAGAACGCGAGCAACTCTGTGGAGCTCGGATCGTAGTCTAATT
AAGAAGTTGACCTGAACTCACAGTTTTCGTCTGAATTATTGCCAGGTGCG
CTTCATGGTGGACCCTTAGGCGCCATTCACCGATCCGTCAAGCCCCACGA
ACACCACCTTCATCCATCATCAGCGCCAACATGTGGGGTATTTGGACGTT
AAGTGACATACCGCAGATGATCCGAACAGTTCGATGGGAAAGAACACGTG
TATCTCCTTCCGCATGGGTTTGCGGAATTAGTTGTACTGTACGTCTCGTG
GATTGATCACGCAAACGCGAACGACTGAATGGAAACGGGGAGGAGTGTTT
TGGGGAGGAATTTTATGTGACTGATGTTTGATTCGGATTTTGTGGGGAGG
TATATATTGTGTTGGAAATACAACAGTAGTGTGCGCTTGATAACGTCAGG
GAGGACTGAACAGAGCGGCAAGGGGTATAGACATGTTGGGGAGAGTGGGA
TAAAGCACGTTTCGCATGAGGGAATGTTTGATGGTTGGTTCCTAATTTGC
CTTTCGGCTCATGCGCCCTCTGTCTGCGTGTGATGTTGATCATTCCTTTT
GACTCGCTGGACGATATCAGCAGAAGCTGGACAATATCAGCAGAAGTGCC
GGTGATTCAAAAGTAATATTTGTCGTGCGAATTTTCTCGAGAGCAACAGA
ATTAGCTCACCGCGCGTCAACCGTGCGTTCTAGTCGAGCGTGCTATCGAG
GTGAGAAGACGATCAGACTGCTGTCTGATGGCGCTTCAAATGTCTTGGTC
GGTGAATCGTCACATAGAGGGTCTATCCCCTAGGCCAAACAGGTGGTCAG
CTCTGACTGGAAAAGTCTATGGTGGAGCCTCACAGGTGTCGTAGCTGGGA
GGGGCAAAGAACCCAAGGCATGTATTTTGTCACAGGAGAGAGAGGATAAT
CCATTGGACTACTCGGTCAGCGCTGCATGGCTGACACTAGTCCTATCT

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1384:10451..17298+

>mRNA_Ecto-sp13_S_contig1384.3002.1 ID=mRNA_Ecto-sp13_S_contig1384.3002.1|Name=mRNA_Ecto-sp13_S_contig1384.3002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=723bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1384:10451..17298+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATTCCCGTGGACACCTGGGAGGCCACTGTCGGGGAAGAAACAACGTA
CGAATGGAGTTTCGACGTGATCAAGGTGGCCTCGTCCTTCATCTACCCCT
TCGACTTTAAGGAAATTGGCCCTTACACCACCTTCCTGTCGGGCGGAGCT
GGTGCTGCGGTAATCGCCACCGTCACCGCCGGCGATGCGGCGGGCAACAC
GGACAGCTGCTCTTTTTTGATGATGCTATGGCCAAGAGGAAAAGGTGATG
ACGACAACGCCGAGTTCGTCGAGGCCGGGAGCAAGACCACCGTCGGCGTC
ACCGCCAGCGCCTACGACGACCGCCCGGGGGAGGGCGCGGGGGACGTCGG
CTGCGGAGAGATGGGTTGCCTTCCTGATCTCGCCCACGACGGCGTCGGCG
AGGAGGACACGGAGTCGAGGTGGTCGTGCGCCGAGGAGATCGTGCCCAAC
GGAGGCCAGTGCGAGATCACCTTCACGTTCGACAGCCCCCAAGACATCAC
CGACGTGCAGGTTGCCTTCTGGAAGGGAGACGAGCGCACTCGCACTCTCA
AGGTGAAGATAAACGGCGACAAGATCGGCGAGTACGAGTCCTACCCCGGA
TCTACCTTCAACTCGTTCGGGATCCAAGAGAACGGCGTGCACACCGTTGC
CATGGAGTCCGTTGGCATCGACAGGGACGACTGGATCAGCCTGCTCGAGG
TGCGCTTCATGGTGGACCCTTAG