prot_Ecto-sp13_S_contig1383.2996.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1383.2996.1
Unique Nameprot_Ecto-sp13_S_contig1383.2996.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length827
Homology
BLAST of mRNA_Ecto-sp13_S_contig1383.2996.1 vs. uniprot
Match: D8LK34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK34_ECTSI)

HSP 1 Score: 1287 bits (3331), Expect = 0.000e+0
Identity = 735/799 (91.99%), Postives = 751/799 (93.99%), Query Frame = 0
Query:   31 MAVDLLAASRRPLERLLHECSFSQWENIALFLDEGATEAVRWAGGLGFVLEELGISQILDLQAFAPGRTPPEVPEAEGRTRGIFLVTNFVWDVEGAVLHAASTYGLTEVALACSVSEEAHACHPHAAHISEETGGRASLAVVSQQLKVSLERMLKIKAQSSSSGRRRFSKXXXXXXXXXXXXSIQTIATEAAPHLASTAVDPTVLVTIKHSPLHVGCFFQASTTSTSGGGSSVDVDQPLDAEGKQRKGCSAFSLASPACARVFPLRRCDWEGXXXXXXXXXXXXXXXXXXXXXXXXXETRGHVSAEEVPRGERLRYRLLAHTLVESLWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAVAEDLKRVSLERPAPPRFGGEGGVDSAFSGRGGGLGSDGA---ARREASVVLIDRNLDVAAAASHGGSLLQRILSSLDRTGTPNFSVPTTSSSSEAVAVDWSPSAAAHQQDVGVGLPMLTPGLGLPTRTAVVERSGXXXXXXXXAG-----GKPPRFLAMKALSGFPWRAPPSLCHSRGDAGEAAGVVHAMACHEEEEGQAALISALEKCVSDNGCIPPPRKRRGMGSSIMALVTSLAKGNPRAGGLSGDRVCFRCRGVLQVALAAMEAHQRTSSLAGSGWSETVAAERVQLRQLRDGSTVDVVMEQLCATLNRAPPMDSSSSSPSSPPGGTASPGAGAARTGSTAREALLLALRGVSLAGESIGAQDATSFRKAWISRMLAGGFREEGSGVPSGVAEAVDQIRSRKRERTTAPEPAAESVGTGEVEEAGVLLELEDIARER 821
            MAVDLLAASRRPLERLLHECSFSQWENIALFLDEGATEAVRWAGGLGFVLEELGIS ILDLQAFAPGR+PP VPE+EG TRGIFLVTNFVWDVEGAVLHAA TYGLTEVALACSVSEEAHACH HAAHISEETGGRAS AVVSQQLKVSLERMLKIKAQSSSSGRRRFSK      XXXXXX  QTIATEAAPHLA+ AVDPTVLVTIKHSPLHVGCFFQASTT TSGGGSSVDVDQPLD++G+ +KGCSAFSLASPACARVFPLRRCDWEGXXXXXXXXXXXXXXXXXXXXXXXXXETRGHVSAEEVPRGERLRYRLLAHTLVE+LWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAVAEDLKRVSLERPAPP FGGEGG DSA SGRGGG GSDGA   ARREASVVLIDRNLDVAAAASHGGSLLQRILSS+DRTGTPN +VP T SS EAVA+DWSPSAAAHQQDVGV LPMLTPGLGLP R A VERSGXXXXXXXX       GKPPR LAMKALSGFPWRAPPSLCHS GDAG AAGVVHAMACH EEEGQAALISALEKCVSDNGC+PPPRKRRGMGSSIMALVTSLA+GNPRAGGLSGDRVCF+ RGVLQVALAAMEAHQRTSSLAGSGWSETVAAERVQLRQLRDGSTVDVVMEQLCATLNRAPPMD SSSS SSPPGGTAS GAGAARTGS+AREALLLALRGVSLAGESIGAQDATSFRKAWISRMLAGGFRE GSGVP+GVAEAVDQIRSRKRERTTAPEPAAESVGTGEVEEAGVLLELEDIARER
Sbjct:    1 MAVDLLAASRRPLERLLHECSFSQWENIALFLDEGATEAVRWAGGLGFVLEELGISHILDLQAFAPGRSPPAVPESEGLTRGIFLVTNFVWDVEGAVLHAACTYGLTEVALACSVSEEAHACHSHAAHISEETGGRASFAVVSQQLKVSLERMLKIKAQSSSSGRRRFSKPSPSSTXXXXXXXTQTIATEAAPHLAANAVDPTVLVTIKHSPLHVGCFFQASTTITSGGGSSVDVDQPLDSQGQHQKGCSAFSLASPACARVFPLRRCDWEGXXXXXXXXXXXXXXXXXXXXXXXXXETRGHVSAEEVPRGERLRYRLLAHTLVEALWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAVAEDLKRVSLERPAPPGFGGEGGADSASSGRGGGFGSDGAGPAARREASVVLIDRNLDVAAAASHGGSLLQRILSSIDRTGTPNSAVPATPSSPEAVAIDWSPSAAAHQQDVGVVLPMLTPGLGLPARAAAVERSGXXXXXXXXXXXXXXXGKPPRLLAMKALSGFPWRAPPSLCHSGGDAGAAAGVVHAMACHGEEEGQAALISALEKCVSDNGCVPPPRKRRGMGSSIMALVTSLARGNPRAGGLSGDRVCFKSRGVLQVALAAMEAHQRTSSLAGSGWSETVAAERVQLRQLRDGSTVDVVMEQLCATLNRAPPMDFSSSS-SSPPGGTASLGAGAARTGSSAREALLLALRGVSLAGESIGAQDATSFRKAWISRMLAGGFREGGSGVPAGVAEAVDQIRSRKRERTTAPEPAAESVGTGEVEEAGVLLELEDIARER 798          
BLAST of mRNA_Ecto-sp13_S_contig1383.2996.1 vs. uniprot
Match: A0A7S2RG32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG32_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.470e-5
Identity = 38/128 (29.69%), Postives = 61/128 (47.66%), Query Frame = 0
Query:   33 VDLLAASRRPLERLLHECSFSQWENIALFLDEGATEAVRWAGGLGFVLEELGISQILDLQAFAP------GRTPPEVPEAEGRTRGIFLVTNFVWDVEGAVLHAASTYGLTEVALACSVSEEAHACHP 154
            +D L  +R+P    L   +    +   LFLD+ A EA++WAGGL F LEELG   +L L  + P      G  P EV       R + ++ + +W+ +  ++   +  G +E  L  +   + HA  P
Sbjct:   10 LDPLEWNRQPFRTRLFARAV---KGALLFLDDVAAEALKWAGGLPFALEELGAQAVLRLGDYGPPGETGEGGLPGEVSVLPRGDRVVVVLASALWEAQHELIAVLTGTGASEALLCPAQDGDRHAVEP 134          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1383.2996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK34_ECTSI0.000e+091.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RG32_9STRA1.470e-529.69Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1383contigEcto-sp13_S_contig1383:8925..16987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1383.2996.1mRNA_Ecto-sp13_S_contig1383.2996.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1383 8925..16987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1383.2996.1 ID=prot_Ecto-sp13_S_contig1383.2996.1|Name=mRNA_Ecto-sp13_S_contig1383.2996.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=827bp
SCPVHLSSRLAVWCPAILVCFNQRTSVKYKMAVDLLAASRRPLERLLHEC
SFSQWENIALFLDEGATEAVRWAGGLGFVLEELGISQILDLQAFAPGRTP
PEVPEAEGRTRGIFLVTNFVWDVEGAVLHAASTYGLTEVALACSVSEEAH
ACHPHAAHISEETGGRASLAVVSQQLKVSLERMLKIKAQSSSSGRRRFSK
PSPSSSSPPSSSSIQTIATEAAPHLASTAVDPTVLVTIKHSPLHVGCFFQ
ASTTSTSGGGSSVDVDQPLDAEGKQRKGCSAFSLASPACARVFPLRRCDW
EGGGGGGAGAALFAAAAAVEGGGGGGGETRGHVSAEEVPRGERLRYRLLA
HTLVESLWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAVAEDLKRVSLERP
APPRFGGEGGVDSAFSGRGGGLGSDGAARREASVVLIDRNLDVAAAASHG
GSLLQRILSSLDRTGTPNFSVPTTSSSSEAVAVDWSPSAAAHQQDVGVGL
PMLTPGLGLPTRTAVVERSGGGGGGGEGAGGKPPRFLAMKALSGFPWRAP
PSLCHSRGDAGEAAGVVHAMACHEEEEGQAALISALEKCVSDNGCIPPPR
KRRGMGSSIMALVTSLAKGNPRAGGLSGDRVCFRCRGVLQVALAAMEAHQ
RTSSLAGSGWSETVAAERVQLRQLRDGSTVDVVMEQLCATLNRAPPMDSS
SSSPSSPPGGTASPGAGAARTGSTAREALLLALRGVSLAGESIGAQDATS
FRKAWISRMLAGGFREEGSGVPSGVAEAVDQIRSRKRERTTAPEPAAESV
GTGEVEEAGVLLELEDIARERCGSVG*
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