prot_Ecto-sp13_S_contig1382.2991.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1382.2991.1
Unique Nameprot_Ecto-sp13_S_contig1382.2991.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length288
Homology
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Match: A0A6H5JJ59_9PHAE (RPAP3_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ59_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 1.650e-140
Identity = 221/290 (76.21%), Postives = 235/290 (81.03%), Query Frame = 0
Query:    1 MASRQSDGALHFETSALHLELSAALKEDVSRKKTDEMKKRAIHTAASY---DEFRHMVSCAQLNPVTRKEMEMLSDPKRGWQGRVGGVAPTTKVLGSTGRQKAPRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRLVGPKNVSALFRVEMEPDVLGQVLSAVCQEFPFQPHRIDTATTATQENEERFGAPTRGDAAGSAAMTANRNASADEAGATFCVEWLRALSRTGRFAVNILFLGYNEKQALARAFDLITAVLGDEDDEEISSLRRAYAV 287
            MASRQ DG LH ETSALHLELSAALK      + D   ++  H+  S     +   +V  A+     RKEMEMLSDPKRGWQGRVGGVAPTT V G  GRQKAPR+TQRSVDTA+ GGAKAGPLRAPKDHAQFQRDWRRRCR NGERRDYLRLVGPKN SALFRVEMEPDVLGQV+S VC+EFPFQP RID AT ATQENEER GAPTRGDAAGS A+TAN NASADEAGA  C+EWLRALSRTGRFAVNILFL  NEKQALARAFDL TAV GDE   EISSLR+AYAV
Sbjct:    1 MASRQGDGTLHLETSALHLELSAALKARGCEPEEDGRDEKTSHSYGSKLRRIQAHGLVRSAKPCHGVRKEMEMLSDPKRGWQGRVGGVAPTTNVSGRIGRQKAPRRTQRSVDTALRGGAKAGPLRAPKDHAQFQRDWRRRCRTNGERRDYLRLVGPKNASALFRVEMEPDVLGQVISVVCEEFPFQPQRIDAATPATQENEERSGAPTRGDAAGSTAITANGNASADEAGARLCLEWLRALSRTGRFAVNILFLADNEKQALARAFDLTTAVFGDE---EISSLRKAYAV 287          
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Match: D7G465_ECTSI (RPAP3_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G465_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 2.180e-127
Identity = 191/220 (86.82%), Postives = 199/220 (90.45%), Query Frame = 0
Query:   68 MEMLSDPKRGWQGRVGGVAPTTKVLGSTGRQKAPRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRLVGPKNVSALFRVEMEPDVLGQVLSAVCQEFPFQPHRIDTATTATQENEERFGAPTRGDAAGSAAMTANRNASADEAGATFCVEWLRALSRTGRFAVNILFLGYNEKQALARAFDLITAVLGDEDDEEISSLRRAYAV 287
            MEMLS PKRGWQGRVGGVAPTTKV GSTGRQKAPR+TQRSVDTAI+GGAKAGPLRAPKDHAQFQRDWRRRC  NGERRDYLRL+GPKNVSALFRVEMEPDVLGQVLS VCQEFP  P R+DTA  AT ENEER GAPTRGDA GSAA TAN +ASAD+AGA FCVEWL ALSRTGRFAVNILFL   EKQ LARAFDLI+AVLGDEDDEEISSLR+AYAV
Sbjct:    1 MEMLSVPKRGWQGRVGGVAPTTKVSGSTGRQKAPRRTQRSVDTAISGGAKAGPLRAPKDHAQFQRDWRRRCCTNGERRDYLRLIGPKNVSALFRVEMEPDVLGQVLSVVCQEFPLHPQRLDTAMPATPENEERSGAPTRGDAGGSAAETANGSASADKAGARFCVEWLWALSRTGRFAVNILFLADKEKQELARAFDLISAVLGDEDDEEISSLRKAYAV 220          
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Match: A0A7S4DL22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL22_HETAK)

HSP 1 Score: 126 bits (317), Expect = 3.030e-32
Identity = 72/170 (42.35%), Postives = 105/170 (61.76%), Query Frame = 0
Query:    7 DGALHFETSALHLELSAALKEDVSRKKTDEMKKRAIHTAASYDEFRHMVSCAQLNPVTRKEMEMLSDPKRGWQGRVGGVAPTTKVLGSTGRQKAPRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRLVGPKNVSALFRVEMEPDVLGQVLSAV 176
            DG+L+  T  L  EL   L++D + ++TD+MKKRAIH A +YDEFR+MV CA   PVTRKE+E LS P +GWQ      + T   L  T   +A ++T +    A         L  PK+  +F+RDWRR+C  + ++  YLRLVGP+ ++ALF  +++  +LGQ+L A+
Sbjct:    9 DGSLN--TKKLQKELIQGLEDDRNYQRTDDMKKRAIHVAGTYDEFRNMVLCANQQPVTRKELESLSKPSKGWQN-----SRTQSGLPGTSSARAKKKTGQGEIKASK------KLEVPKNSVEFERDWRRKCNTDLKKIKYLRLVGPRRLAALFAGDLDAALLGQLLGAL 165          
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Match: A0A7S2C1V5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1V5_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.220e-25
Identity = 95/288 (32.99%), Postives = 141/288 (48.96%), Query Frame = 0
Query:   14 TSALHLELSAALKEDVSRKKTDEMKKRAIHTAASYDEFRHMVSCAQLNPVTRKEMEMLSDPKRGWQGRVGGVAPTTKVLGSTGRQKAPRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRLVGPKNVSALFRVEMEPDVLGQVLSAVCQEFPFQPHRIDTATTATQENEERFGAPTRGDAAGSAAMTANR------------NASADEAGAT----FCVEWLRALSRTGRFAVNILFLGYNEKQALARAFDLITAVLGDEDDEEISSLRRAY 285
            T+ +  EL+ +LKED +   TDE KK+ I   A+YDEFRHMV+ A    V+R EME L    +GW+ +       TK+  +TG +K+ R  +R         ++  P   P    QF+RDWRR C+  G +  YLRL G + V A+F+ E++  +LG++L+A+                A +  E R G  T G    +AA                  ASA EA       F +  LRAL +TGRF++N+ FL   +K ++A   + +   LG ED   + + R  Y
Sbjct:   79 TTMIQKELADSLKEDRNYHNTDEAKKKYITKCATYDEFRHMVASADQKRVSRAEMETLGKTTKGWEQK-------TKL--TTGAKKSAR-AKRQQTKGSKKLSQEFPTTPPATSMQFERDWRRHCKELGAQLRYLRLCGSETVLAVFKTEIDAALLGKLLAAL----------------AGRAAELRAGGATEGGRDWAAAEVRXXXXXXXXXXXXXXEASAAEAARLEEPLFLLSILRALPQTGRFSLNVNFLEDKDKASVATVVEWL-GELGVEDAGALEATRALY 339          
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Match: A0A7S2REI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REI2_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.240e-23
Identity = 66/177 (37.29%), Postives = 100/177 (56.50%), Query Frame = 0
Query:    4 RQSDGALHFETSALHLELSAALKEDVSRKKTDEMKKRAIHTAASYDEFRHMVSCAQLNPVTRKEMEMLSDPKRGWQGRVGGVAPTTKVLGSTGRQKAPRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRLVGPKNVSALFRVEMEPDVLGQVLSAVCQEF 180
            ++S G+L  +   L  ELS AL+ED     TDE KKR I TAASYDEFRH+V+CA L  ++R E+E LS  K+GW       AP ++      R++  +    +V  +        P++ P    +F+RDW+R CR++ +R  YL L  P ++  LF  +M+  ++ +V+SA C  F
Sbjct:   39 QESSGSLRQDV--LVSELSMALEEDRKHHVTDEAKKRHITTAASYDEFRHLVACADLKRLSRSEIESLSQKKKGWAR----PAPASQAGARPSRRRGNKARGAAVPIS------QFPVQPPPSRMEFERDWKRHCRSHDDRVRYLMLCTPDSLPGLFHADMDVTLMSEVISA-CAHF 202          
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Match: A0A7S2C2K5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2K5_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.910e-22
Identity = 87/267 (32.58%), Postives = 128/267 (47.94%), Query Frame = 0
Query:   35 DEMKKRAIHTAASYDEFRHMVSCAQLNPVTRKEMEMLSDPKRGWQGRVGGVAPTTKVLGSTGRQKAPRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRLVGPKNVSALFRVEMEPDVLGQVLSAVCQEFPFQPHRIDTATTATQENEERFGAPTRGDAAGSAAMTANR------------NASADEAGAT----FCVEWLRALSRTGRFAVNILFLGYNEKQALARAFDLITAVLGDEDDEEISSLRRAY 285
            DE KK+ I   A+YDEFRHMV+ A    V+R EME L    +GW+ +       TK+  +TG +K+ R  +R         ++  P   P    QF+RDWRR C+  G +  YLRL G + V A+F+ E++  +LG++L+A+                A +  E R G  T G    +AA                  ASA EA       F +  LRAL +TGRF++N+ FL   +K ++A   + +   LG ED   + + R  Y
Sbjct:    5 DEAKKKYITKCATYDEFRHMVASADQKRVSRAEMETLGKTTKGWEQK-------TKL--TTGAKKSAR-AKRQQTKGSKKLSQEFPTTPPATSMQFERDWRRHCKELGAQLRYLRLCGSETVLAVFKTEIDAALLGKLLAAL----------------AGRAAELRAGGATEGGRDWAAAEVRXXXXXXXXXXXXXXEASAAEAARLEEPLFLLSILRALPQTGRFSLNVNFLEDKDKASVATVVEWL-GELGVEDAGALEATRALY 244          
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Match: A0A1V9Z8T6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z8T6_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.950e-22
Identity = 63/165 (38.18%), Postives = 89/165 (53.94%), Query Frame = 0
Query:   12 FETSALHLELSAALKEDVSRKKTDEMKKRAIHTAASYDEFRHMVSCAQLNPVTRKEMEMLSDPKRGWQGRVGGVAPTTKVLGSTGRQKAPRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRLVGPKNVSALFRVEMEPDVLGQVLSAV 176
            F+T AL  EL  AL+ED   K TDEMKKRAIHTA SYDEFR+ V CA LNPVT KE++ LS  +R          P         ++   R+  + ++   N          PK  A+F R+W+R C +N  + +YL L  P+ +  LF+ E+E D+   ++  +
Sbjct:    9 FDTEALQKELVNALEEDRKYKATDEMKKRAIHTAGSYDEFRNFVLCADLNPVTSKELQNLSKSQR---------QPNRLYK----KKSQTRERVKLLNATDN-------FAIPKTSAEFLRNWKRNCSSNALKYEYLVLTTPERLGRLFQAEIEADLFVNIVDCM 153          
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Match: A0A6G0X454_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X454_9STRA)

HSP 1 Score: 102 bits (253), Expect = 4.000e-22
Identity = 63/169 (37.28%), Postives = 91/169 (53.85%), Query Frame = 0
Query:   12 FETSALHLELSAALKEDVSRKKTDEMKKRAIHTAASYDEFRHMVSCAQLNPVTRKEMEMLSDPKRGWQGRVGGVAPTTKVLGSTGRQKAPRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRLVGPKNVSALFRVEMEPDVLGQVLSAVCQEF 180
            F+T+AL  EL+ AL+ED   KKTDEMKKRAIHTAASYDEFR+ V CA L PV+ K+++ LS   R  + R+    P   +  S  +  +  +     DT+                  F R WRR C  + ++  Y+RL  P     +F  E+E D++ Q++  + +EF
Sbjct:    9 FDTAALQKELAIALEEDRKYKKTDEMKKRAIHTAASYDEFRNFVLCADLKPVSSKDLQNLSKSDRR-RNRMYQTKPNNPLDASRAKTLSACKKTTPPDTS----------------GDFLRTWRRSCPTHRDKYQYMRLTTPARFRKMFASELEADLMIQLIECMSEEF 160          
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Match: W4H561_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H561_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.510e-21
Identity = 64/173 (36.99%), Postives = 95/173 (54.91%), Query Frame = 0
Query:   12 FETSALHLELSAALKEDVSRKKTDEMKKRAIHTAASYDEFRHMVSCAQLNPVTRKEMEMLSDPKR----GWQGRVGGVAPTTKVLGSTGRQKAPRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRLVGPKNVSALFRVEMEPDVLGQVLSAVCQEF 180
            F+T+AL  EL  AL+ED   K TD+MKKRAIHTAASYD+FR+ V CA L PV+ KE++ LS  +R    G+Q +      T+K     G+Q          D A+           P    +F R WRR C    ++  YL++  P  V+ LF+ E++ D++ Q+++ +  +F
Sbjct:    9 FDTAALQKELVIALEEDRKYKLTDDMKKRAIHTAASYDDFRNFVLCADLKPVSSKELQNLSKSERKRNRGYQTKSLLHVDTSKAKTLVGKQ----------DAAV----------PPATSVEFIRTWRRSCLTQRDKYKYLQVTTPPRVAKLFQAELDSDLMLQIVACLSAQF 161          
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Match: A0A485L547_9STRA (Aste57867_16283 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L547_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.470e-21
Identity = 68/175 (38.86%), Postives = 88/175 (50.29%), Query Frame = 0
Query:   12 FETSALHLELSAALKEDVSRKKTDEMKKRAIHTAASYDEFRHMVSCAQLNPVTRKEMEMLSDPKRGWQGRVGGVAPTTKVLGSTGRQKAPRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRLVGPKNVSALFRVEMEPDVLGQVLSAVCQEF-PFQPH 185
            F+T+AL  EL+ AL+ED   K TDEMKKRAIHTA SYDEFR+ V CA L PV+ KE++ LS   R       G A TT   G T         Q   D ++           P    +F R W R C     +  YL L  P  + ALF  E+  D+L Q+++ +  +F    PH
Sbjct:   10 FDTAALQQELAQALEEDRKYKLTDEMKKRAIHTAGSYDEFRNFVLCADLKPVSSKELQNLSRSARKRNRGFLGDATTTTSRGKT--------LQGKRDASV----------PPATSVEFVRTWHRSCTTQATKYAYLELTTPARLQALFSAELGTDLLFQLVACLNAQFVDLNPH 166          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1382.2991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJ59_9PHAE1.650e-14076.21RPAP3_C domain-containing protein n=1 Tax=Ectocarp... [more]
D7G465_ECTSI2.180e-12786.82RPAP3_C domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S4DL22_HETAK3.030e-3242.35Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2C1V5_9STRA2.220e-2532.99Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2REI2_9STRA1.240e-2337.29Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2C2K5_9STRA3.910e-2232.58Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1V9Z8T6_9STRA3.950e-2238.18Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
A0A6G0X454_9STRA4.000e-2237.28Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4H561_9STRA1.510e-2136.99Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A485L547_9STRA2.470e-2138.86Aste57867_16283 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031733Dynein attachment factor, N-terminalPFAMPF15867Dynein_attach_Ncoord: 14..78
e-value: 1.2E-16
score: 60.4
IPR025986RNA-polymerase II-associated protein 3-like, C-terminal domainPFAMPF13877RPAP3_Ccoord: 124..256
e-value: 1.7E-12
score: 47.7
IPR042422Coiled-coil domain-containing protein 103PANTHERPTHR28572FAMILY NOT NAMEDcoord: 13..277
NoneNo IPR availablePANTHERPTHR28572:SF1COILED-COIL DOMAIN-CONTAINING PROTEIN 103coord: 13..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1382contigEcto-sp13_S_contig1382:2556..4770 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1382.2991.1mRNA_Ecto-sp13_S_contig1382.2991.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1382 2378..4771 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1382.2991.1 ID=prot_Ecto-sp13_S_contig1382.2991.1|Name=mRNA_Ecto-sp13_S_contig1382.2991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=288bp
MASRQSDGALHFETSALHLELSAALKEDVSRKKTDEMKKRAIHTAASYDE
FRHMVSCAQLNPVTRKEMEMLSDPKRGWQGRVGGVAPTTKVLGSTGRQKA
PRQTQRSVDTAINGGAKAGPLRAPKDHAQFQRDWRRRCRNNGERRDYLRL
VGPKNVSALFRVEMEPDVLGQVLSAVCQEFPFQPHRIDTATTATQENEER
FGAPTRGDAAGSAAMTANRNASADEAGATFCVEWLRALSRTGRFAVNILF
LGYNEKQALARAFDLITAVLGDEDDEEISSLRRAYAV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031733Dynein_attach_N
IPR025986RPAP3-like_C
IPR042422CC103