prot_Ecto-sp13_S_contig1382.2990.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1382.2990.1
Unique Name	prot_Ecto-sp13_S_contig1382.2990.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	330

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: D7G466_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G466_ECTSI)

HSP 1 Score: 509 bits (1311), Expect = 2.960e-178
Identity = 260/329 (79.03%), Postives = 264/329 (80.24%), Query Frame = 0

Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNRPF 329
            VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLG VEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAK+                              YVGNLSWECQWQDLKDHMRAAG+VKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREE                                 GP GSKR+GQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNRP+
Sbjct:  172 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGTVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKV------------------------------YVGNLSWECQWQDLKDHMRAAGSVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREE---------------------------------GPIGSKRIGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNRPY 437

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BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S2KX18_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KX18_9STRA)

HSP 1 Score: 248 bits (633), Expect = 5.920e-75
Identity = 143/332 (43.07%), Postives = 186/332 (56.02%), Query Frame = 0

Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQV--YVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGA---EGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 327
            V+V NLAY+V WQDLKDHM++AG V  A+V +  DGRSKG GIVEF+    A+NAI  L++TEL GR I VRE+R    + G    G  G              V        GR +N +  V  YVGNL++E  WQ+LKDHMR  GN+   D+ Q   GRSKGC +V Y++P+EA  AIR+L ++EL GR IFVREDRE                                      S+  G L  GA   +G Q++V N+SW TGW+ LKDHF QCG V   E+ E   GR KG+  +RF +  DAA+AI +L+G +  GR++ VR DN+
Sbjct:  179 VYVGNLAYEVAWQDLKDHMRDAGEVQFAEVMMMNDGRSKGCGIVEFADEEGAQNAIDTLNDTELCGRQIFVREDREQKVSGG----GHHGQHXXXXXXXXXLNRVGXGAXXXXGRYNNQLGNVNVYVGNLAYETTWQELKDHMRRVGNIDKADILQGNDGRSKGCGIVIYQSPKEAQRAIRELQNSELNGRPIFVREDRESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SRTSGNLMPGAPSEQGCQLYVGNLSWGTGWRDLKDHFGQCGGVDRAEVAEGPDGRKKGFGVIRFHTAGDAAEAIERLNGGEFMGRKLEVRLDNK 504

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BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S1DBL6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBL6_CYCTE)

HSP 1 Score: 240 bits (613), Expect = 1.110e-73
Identity = 135/327 (41.28%), Postives = 181/327 (55.35%), Query Frame = 0

Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 327
            V+V NL++DV WQDLKDHM++AG V+ A+V    +GRSKG GIVE++ P EA+ AI  L++TEL GR + VRE+R    N G   G   GA                      G        VYV NL+++  WQDLKDH RAAGNV    +   P GRS GC VV Y+ P+EA  AIR+L +++L GR +++R+DR  V+PG G                                           G Q+ V N+S++T WQ LKDHF+QCG V+ VE+ E  +GR KG+ TVRFGS  +A  AI+QL+G +L GR + VR D++
Sbjct:   63 VYVGNLSWDVAWQDLKDHMRDAGEVVHAEVITEANGRSKGCGIVEYATPAEAQEAIKTLNDTELKGRMVFVREDRET--NSGTYHGAPGGAXXXXXXXXXXXXXXXXXXXXXXGT------SVYVWNLAYDTSWQDLKDHCRAAGNVDQATILTNPEGRSLGCGVVVYQNPKEASRAIRELQNSDLNGRPMYLRKDR--VQPGGGRXXXXXXXXXXXXXXXXXXXXX--------------------SGCQLFVGNLSFDTSWQDLKDHFRQCGEVEHVEVMETPEGRKKGFGTVRFGSAAEAEAAISQLNGVELQGRTLEVRLDHK 359

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BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S4IUY5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUY5_9STRA)

HSP 1 Score: 243 bits (621), Expect = 4.730e-73
Identity = 139/328 (42.38%), Postives = 181/328 (55.18%), Query Frame = 0

Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFF-FSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 327
            V+V NL++DV  QDLKDHM+NAG V+ A+V    DGRSKG GIVEF+   EA  AIS L++TEL GR I VRE+R                     +          + F  F GR       VYVGNL++E  WQDLKDHMR AGNV   ++ Q   GRSKGC +V Y+ PQEA  AIR+L +T L GR IFVREDRE+                  + R+                         A G Q+ V N+SW+T W+ LKDHF+QCG V+  E+ E   G+S+G+ TVRF  ++DAA+AI +L+G +L GR + V+ D +
Sbjct:  232 VYVGNLSWDVALQDLKDHMRNAGEVVFAEVMKEHDGRSKGCGIVEFATAAEAEEAISTLTDTELKGRMIFVREDR-------------------ETTXXXXXXXXXXAVFGGFQGRXXXXXTSVYVGNLAYETSWQDLKDHMRKAGNVDQANILQGEDGRSKGCGIVRYQRPQEASRAIRELQNTMLTGRPIFVREDREQGSHHXXXXXXXXXXXXXXHSRV-------------------------AAGCQLWVGNLSWDTSWRELKDHFRQCGDVERAEVMEGPDGQSRGFGTVRFYRQRDAANAIQRLNGVELQGRVLEVKIDGK 515

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BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S4IV24_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IV24_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.430e-71
Identity = 139/328 (42.38%), Postives = 181/328 (55.18%), Query Frame = 0

Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFF-FSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 327
            V+V NL++DV WQ LKDHM+NAG V+ A+V    DGRSKG GIVEF+   EA  AIS L++TEL GR I VRE+R                     +          + F  F GR       VYVGNL++E  WQDLKDHMR AGNV   ++ Q   GRSKGC +V Y+ PQEA  AIR+L +T L GR IFVREDRE+                  + R+                         A G Q+ V N+SW+T W+ LKDHF+QCG V+  E+ E   G+S+G+ TVRF  ++DAA+AI +L+G +L GR + V+ D +
Sbjct:  504 VYVGNLSWDVAWQGLKDHMRNAGEVVFAEVMKEHDGRSKGCGIVEFATAAEAEEAISTLTDTELKGRMIFVREDR-------------------ETTXXXXXXXXXXAVFGGFQGRXXXXXTSVYVGNLAYETSWQDLKDHMRKAGNVDQANILQGEDGRSKGCGIVRYQRPQEASRAIRELQNTMLTGRPIFVREDREQGSHHXXXXXXXXXXXXXXHSRV-------------------------AAGCQLWVGNLSWDTSWRELKDHFRQCGDVERAEVMEGPDGQSRGFGTVRFYRQRDAANAIQRLNGVELQGRVLEVKIDGK 787

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BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S1BM28_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM28_9STRA)

HSP 1 Score: 233 bits (593), Expect = 3.950e-70
Identity = 138/325 (42.46%), Postives = 179/325 (55.08%), Query Frame = 0

Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVRED 325
            V+V NL+++V WQDLKDHM+ AG V  A+V  G DGRSKG GIVE++   +A+ AIS L++T+L GR I VRE+R         VGG                              ++   VYVGNL++E  WQDLKDHMRAAGNV   D+     GRSKGCA+V Y+ PQEA  AIR+L ++ L GR IFVREDRE+   G G                           G  G      + +G    Q+ V N+S++T W+ LKDHFKQCG V  VE+ E   GR KGY TV F   +DA+ AI +++G +L GR + V+ D
Sbjct:  108 VYVGNLSWEVVWQDLKDHMRQAGDVQFAEVMTGGDGRSKGCGIVEYATAEQAQEAISTLNDTDLNGRMIFVREDRE--------VGGXXXXXXXXXXX-------XXXXXXXXXXXXSNACSVYVGNLAFETPWQDLKDHMRAAGNVDKADILTGEDGRSKGCAIVIYQKPQEAARAIRELQNSVLQGRPIFVREDREQ---GGGRXXXXXXXXXXXR------------SAGYDGDYDRMPVDDGTA-TQLFVGNLSYDTTWEELKDHFKQCGEVDRVEVMEGPDGRKKGYGTVSFFKAKDASSAIRRMNGVELAGRPLEVKVD 401

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BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A6H5J8N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8N0_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 5.770e-69
Identity = 141/368 (38.32%), Postives = 191/368 (51.90%), Query Frame = 0

Query:    1 VFVSNLAYDVQWQDLKDHMKN-AGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRG------------------VG-------GAAGAK--------ISPNSMG-------QYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 327
            V+V NLA+DV WQDLKDHM+   G VIRADV     GRS+G GIVE+++P +A  AI QL+ +EL  R I VRE+R ++G  G G                  VG       GA G +        +   SMG        +              P  +  ++YVGNL+W  +WQ+LKDHMR  G V   D+ Q+  GRSKGC +VEYE  + A+ AIR+L++T L GR IFVREDRE+  P                                          E   GRQ++V N+S+ET W  LKDHF+  G V+  ++  D   RSKG+ TVRF ++++A  AI +L+GT+L  R+I VRED++
Sbjct:   15 VYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDR-ESGTPGSGHXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVLHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXX----------------XXENLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSK 365

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BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S0DYZ3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DYZ3_9CRYP)

HSP 1 Score: 227 bits (579), Expect = 8.800e-69
Identity = 135/347 (38.90%), Postives = 181/347 (52.16%), Query Frame = 0

Query:    1 VFVSNLAYDVQWQDLKDHMKNAGS---VIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAG---NVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREE-------------VRPGAGDLSCVCRPHFCA---NLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVRED 325
            V+V NL+++  WQDLKDHM+  G    V+ ++V     GRSKG  +VE+S P  A  AI +L +T++ GR I VRE+R D+                                           +VYVGNLSW+  WQD+KDHMR      +VK VD+  +P GRSKGCA+VEY +P EA  AI +L+ T+LLGR IFVREDRE                 G  +   V R  F     N+R  PMP  +   +   G +    L    +GR+V+V N+SWE  WQ LKDH +  G V++ +I     GRSKG A V + + ++A  AI +L  +DL GR I VRED
Sbjct:   37 VYVGNLSWECSWQDLKDHMRGPGGDLDVVYSEVMYDGGGRSKGCALVEYSSPQFATRAIEELHDTDIRGRKIFVREDREDS-------------------------------------------RVYVGNLSWDAAWQDVKDHMRGPNQDMDVKHVDVLLDPVGRSKGCAIVEYSSPAEAQRAIDELNHTDLLGRNIFVREDRENGISSNSNNGVAQVTFNGVNNNPAVIRGPFTVMRGNMRATPMPARVQMPRVTRGPQIRPPLRRPGQGRRVYVGNLSWECQWQDLKDHMRAAGEVRYADIMYGPDGRSKGCALVEYNTVEEAQKAIAELHDSDLMGRLIFVRED 340

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BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: D8LGN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN3_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 9.010e-68
Identity = 138/368 (37.50%), Postives = 186/368 (50.54%), Query Frame = 0

Query:    1 VFVSNLAYDVQWQDLKDHMKN-AGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGD---------------------------------------AGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGR-PHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 327
            V+V NLA+DV WQDLKDHM+   G VIRADV     GRS+G GIVE+++P +A  AI QL+ +EL  R I VRE+R                                         A   G  +G + G  +    M Q             G  P  +  ++YVGNL+W  +WQ+LKDHMR  G V   D+ Q+  GRSKGC +VEYE  + A+ AIR+L++T L GR IFVREDRE+  P                 R                        E   GRQ++V N+S+ET W  LKDHF+  G V+  ++  D   RSKG+ TVRF ++++A  AI +L+GT+L  R+I VRED++
Sbjct:  153 VYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGXXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXXXGAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNP-----------------RQXXXXXXXXXXXXXXXXXXXXXXXENLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSK 503

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BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A2D4CCJ1_PYTIN (RNA binding protein putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCJ1_PYTIN)

HSP 1 Score: 225 bits (573), Expect = 1.010e-67
Identity = 137/346 (39.60%), Postives = 188/346 (54.34%), Query Frame = 0

Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQ-VYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTG---------------SKRMGQLHEGA-----EGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVRED 325
            V+V NLA+ VQWQDLKD+M++AG V R  +     GRSKG  +V F    +A+ AI  L++TE  GR + VRE+R        G     G  ++P       ++        +G P  ++ + V+VGNLSW  +WQDLKD+ + AG V   D+ +E GGRS+G  +VE+ T +EA  AI  LHD+EL GR IFVREDRE     +G +S +      A    IP PL   P  G  G               S++M      A     EG  + V N+ +   WQ LKDHF++ G V+ VEIP+ + G+S+GY  VRF    DA  AI++ +GT+L GR I VR D
Sbjct:   25 VYVGNLAWAVQWQDLKDYMRSAGEVERVVLMEDHAGRSKGCAVVTFVTEADAQRAIHTLNDTEFHGRXLFVREDRDPQSGSNTGAWNPPGPPLAP-------LLPPPHSVQDAGPPAPTLGRRVFVGNLSWNIKWQDLKDYFKKAGRVLHADVMEEAGGRSRGFGLVEFSTAEEAQQAIAMLHDSELDGRRIFVREDRENE---SGSISSI------AKRGNIPPPLAPIPIPGSNGAPGMLPXXXXXXXXYSQQMPPSSSYAPAANNEGTTLFVGNLPYGVNWQELKDHFREAGDVEHVEIPQLSDGKSRGYGIVRFVHPDDAMHAIDRFNGTELKGRTIIVRHD 354

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G466_ECTSI	2.960e-178	79.03	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2KX18_9STRA	5.920e-75	43.07	Hypothetical protein n=1 Tax=Skeletonema marinoi T...	[more]
A0A7S1DBL6_CYCTE	1.110e-73	41.28	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]
A0A7S4IUY5_9STRA	4.730e-73	42.38	Hypothetical protein n=2 Tax=Odontella aurita TaxI...	[more]
A0A7S4IV24_9STRA	1.430e-71	42.38	Hypothetical protein n=2 Tax=Odontella aurita TaxI...	[more]
A0A7S1BM28_9STRA	3.950e-70	42.46	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A6H5J8N0_9PHAE	5.770e-69	38.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S0DYZ3_9CRYP	8.800e-69	38.90	Hypothetical protein n=1 Tax=Hanusia phi TaxID=303...	[more]
D8LGN3_ECTSI	9.010e-68	37.50	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A2D4CCJ1_PYTIN	1.010e-67	39.60	RNA binding protein putative (Fragment) n=1 Tax=Py...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 251..323 e-value: 1.0E-21 score: 88.1 coord: 1..72 e-value: 7.6E-17 score: 72.0 coord: 122..194 e-value: 7.9E-19 score: 78.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 123..190 e-value: 1.2E-15 score: 57.0 coord: 1..69 e-value: 3.2E-17 score: 62.1 coord: 253..320 e-value: 2.3E-17 score: 62.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 121..198 score: 14.198
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 250..327 score: 16.295
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 1..76 score: 15.102
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 120..202 e-value: 1.5E-23 score: 84.6 coord: 246..328 e-value: 2.0E-23 score: 84.2 coord: 1..77 e-value: 1.4E-21 score: 78.3
None	No IPR available	PANTHER	PTHR23003	RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN	coord: 1..198 coord: 233..326
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 1..81
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 248..325
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 122..199

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1382	contig	Ecto-sp13_S_contig1382:448..1896 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1382.2990.1	mRNA_Ecto-sp13_S_contig1382.2990.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1382 448..1896 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1382.2990.1 ID=prot_Ecto-sp13_S_contig1382.2990.1|Name=mRNA_Ecto-sp13_S_contig1382.2990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=330bp
VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPY
EARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQ
YPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFV
DLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEV
RPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGR
QVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSE
QDAADAINQLDGTDLDGRRIGVREDNRPF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf