mRNA_Ecto-sp13_S_contig1382.2990.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1382.2990.1
Unique NamemRNA_Ecto-sp13_S_contig1382.2990.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: D7G466_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G466_ECTSI)

HSP 1 Score: 509 bits (1311), Expect = 2.960e-178
Identity = 260/329 (79.03%), Postives = 264/329 (80.24%), Query Frame = 1
Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNRPF 987
            VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLG VEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAK+                              YVGNLSWECQWQDLKDHMRAAG+VKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREE                                 GP GSKR+GQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNRP+
Sbjct:  172 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGTVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKV------------------------------YVGNLSWECQWQDLKDHMRAAGSVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREE---------------------------------GPIGSKRIGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNRPY 437          
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S2KX18_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KX18_9STRA)

HSP 1 Score: 248 bits (633), Expect = 5.920e-75
Identity = 143/332 (43.07%), Postives = 186/332 (56.02%), Query Frame = 1
Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQV--YVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGA---EGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
            V+V NLAY+V WQDLKDHM++AG V  A+V +  DGRSKG GIVEF+    A+NAI  L++TEL GR I VRE+R    + G    G  G              V        GR +N +  V  YVGNL++E  WQ+LKDHMR  GN+   D+ Q   GRSKGC +V Y++P+EA  AIR+L ++EL GR IFVREDRE                                      S+  G L  GA   +G Q++V N+SW TGW+ LKDHF QCG V   E+ E   GR KG+  +RF +  DAA+AI +L+G +  GR++ VR DN+
Sbjct:  179 VYVGNLAYEVAWQDLKDHMRDAGEVQFAEVMMMNDGRSKGCGIVEFADEEGAQNAIDTLNDTELCGRQIFVREDREQKVSGG----GHHGQHXXXXXXXXXLNRVGXGAXXXXGRYNNQLGNVNVYVGNLAYETTWQELKDHMRRVGNIDKADILQGNDGRSKGCGIVIYQSPKEAQRAIRELQNSELNGRPIFVREDRESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SRTSGNLMPGAPSEQGCQLYVGNLSWGTGWRDLKDHFGQCGGVDRAEVAEGPDGRKKGFGVIRFHTAGDAAEAIERLNGGEFMGRKLEVRLDNK 504          
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S1DBL6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBL6_CYCTE)

HSP 1 Score: 240 bits (613), Expect = 1.110e-73
Identity = 135/327 (41.28%), Postives = 181/327 (55.35%), Query Frame = 1
Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
            V+V NL++DV WQDLKDHM++AG V+ A+V    +GRSKG GIVE++ P EA+ AI  L++TEL GR + VRE+R    N G   G   GA                      G        VYV NL+++  WQDLKDH RAAGNV    +   P GRS GC VV Y+ P+EA  AIR+L +++L GR +++R+DR  V+PG G                                           G Q+ V N+S++T WQ LKDHF+QCG V+ VE+ E  +GR KG+ TVRFGS  +A  AI+QL+G +L GR + VR D++
Sbjct:   63 VYVGNLSWDVAWQDLKDHMRDAGEVVHAEVITEANGRSKGCGIVEYATPAEAQEAIKTLNDTELKGRMVFVREDRET--NSGTYHGAPGGAXXXXXXXXXXXXXXXXXXXXXXGT------SVYVWNLAYDTSWQDLKDHCRAAGNVDQATILTNPEGRSLGCGVVVYQNPKEASRAIRELQNSDLNGRPMYLRKDR--VQPGGGRXXXXXXXXXXXXXXXXXXXXX--------------------SGCQLFVGNLSFDTSWQDLKDHFRQCGEVEHVEVMETPEGRKKGFGTVRFGSAAEAEAAISQLNGVELQGRTLEVRLDHK 359          
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S4IUY5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUY5_9STRA)

HSP 1 Score: 243 bits (621), Expect = 4.730e-73
Identity = 139/328 (42.38%), Postives = 181/328 (55.18%), Query Frame = 1
Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFF-FSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
            V+V NL++DV  QDLKDHM+NAG V+ A+V    DGRSKG GIVEF+   EA  AIS L++TEL GR I VRE+R                     +          + F  F GR       VYVGNL++E  WQDLKDHMR AGNV   ++ Q   GRSKGC +V Y+ PQEA  AIR+L +T L GR IFVREDRE+                  + R+                         A G Q+ V N+SW+T W+ LKDHF+QCG V+  E+ E   G+S+G+ TVRF  ++DAA+AI +L+G +L GR + V+ D +
Sbjct:  232 VYVGNLSWDVALQDLKDHMRNAGEVVFAEVMKEHDGRSKGCGIVEFATAAEAEEAISTLTDTELKGRMIFVREDR-------------------ETTXXXXXXXXXXAVFGGFQGRXXXXXTSVYVGNLAYETSWQDLKDHMRKAGNVDQANILQGEDGRSKGCGIVRYQRPQEASRAIRELQNTMLTGRPIFVREDREQGSHHXXXXXXXXXXXXXXHSRV-------------------------AAGCQLWVGNLSWDTSWRELKDHFRQCGDVERAEVMEGPDGQSRGFGTVRFYRQRDAANAIQRLNGVELQGRVLEVKIDGK 515          
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S4IV24_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IV24_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.430e-71
Identity = 139/328 (42.38%), Postives = 181/328 (55.18%), Query Frame = 1
Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFF-FSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
            V+V NL++DV WQ LKDHM+NAG V+ A+V    DGRSKG GIVEF+   EA  AIS L++TEL GR I VRE+R                     +          + F  F GR       VYVGNL++E  WQDLKDHMR AGNV   ++ Q   GRSKGC +V Y+ PQEA  AIR+L +T L GR IFVREDRE+                  + R+                         A G Q+ V N+SW+T W+ LKDHF+QCG V+  E+ E   G+S+G+ TVRF  ++DAA+AI +L+G +L GR + V+ D +
Sbjct:  504 VYVGNLSWDVAWQGLKDHMRNAGEVVFAEVMKEHDGRSKGCGIVEFATAAEAEEAISTLTDTELKGRMIFVREDR-------------------ETTXXXXXXXXXXAVFGGFQGRXXXXXTSVYVGNLAYETSWQDLKDHMRKAGNVDQANILQGEDGRSKGCGIVRYQRPQEASRAIRELQNTMLTGRPIFVREDREQGSHHXXXXXXXXXXXXXXHSRV-------------------------AAGCQLWVGNLSWDTSWRELKDHFRQCGDVERAEVMEGPDGQSRGFGTVRFYRQRDAANAIQRLNGVELQGRVLEVKIDGK 787          
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S1BM28_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM28_9STRA)

HSP 1 Score: 233 bits (593), Expect = 3.950e-70
Identity = 138/325 (42.46%), Postives = 179/325 (55.08%), Query Frame = 1
Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVRED 975
            V+V NL+++V WQDLKDHM+ AG V  A+V  G DGRSKG GIVE++   +A+ AIS L++T+L GR I VRE+R         VGG                              ++   VYVGNL++E  WQDLKDHMRAAGNV   D+     GRSKGCA+V Y+ PQEA  AIR+L ++ L GR IFVREDRE+   G G                           G  G      + +G    Q+ V N+S++T W+ LKDHFKQCG V  VE+ E   GR KGY TV F   +DA+ AI +++G +L GR + V+ D
Sbjct:  108 VYVGNLSWEVVWQDLKDHMRQAGDVQFAEVMTGGDGRSKGCGIVEYATAEQAQEAISTLNDTDLNGRMIFVREDRE--------VGGXXXXXXXXXXX-------XXXXXXXXXXXXSNACSVYVGNLAFETPWQDLKDHMRAAGNVDKADILTGEDGRSKGCAIVIYQKPQEAARAIRELQNSVLQGRPIFVREDREQ---GGGRXXXXXXXXXXXR------------SAGYDGDYDRMPVDDGTA-TQLFVGNLSYDTTWEELKDHFKQCGEVDRVEVMEGPDGRKKGYGTVSFFKAKDASSAIRRMNGVELAGRPLEVKVD 401          
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A6H5J8N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8N0_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 5.770e-69
Identity = 141/368 (38.32%), Postives = 191/368 (51.90%), Query Frame = 1
Query:    1 VFVSNLAYDVQWQDLKDHMKN-AGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRG------------------VG-------GAAGAK--------ISPNSMG-------QYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
            V+V NLA+DV WQDLKDHM+   G VIRADV     GRS+G GIVE+++P +A  AI QL+ +EL  R I VRE+R ++G  G G                  VG       GA G +        +   SMG        +              P  +  ++YVGNL+W  +WQ+LKDHMR  G V   D+ Q+  GRSKGC +VEYE  + A+ AIR+L++T L GR IFVREDRE+  P                                          E   GRQ++V N+S+ET W  LKDHF+  G V+  ++  D   RSKG+ TVRF ++++A  AI +L+GT+L  R+I VRED++
Sbjct:   15 VYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDR-ESGTPGSGHXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVLHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNPRQXXXXXXXXXXXXXXXXXXXXXX----------------XXENLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSK 365          
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A7S0DYZ3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DYZ3_9CRYP)

HSP 1 Score: 227 bits (579), Expect = 8.800e-69
Identity = 135/347 (38.90%), Postives = 181/347 (52.16%), Query Frame = 1
Query:    1 VFVSNLAYDVQWQDLKDHMKNAGS---VIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAG---NVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREE-------------VRPGAGDLSCVCRPHFCA---NLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVRED 975
            V+V NL+++  WQDLKDHM+  G    V+ ++V     GRSKG  +VE+S P  A  AI +L +T++ GR I VRE+R D+                                           +VYVGNLSW+  WQD+KDHMR      +VK VD+  +P GRSKGCA+VEY +P EA  AI +L+ T+LLGR IFVREDRE                 G  +   V R  F     N+R  PMP  +   +   G +    L    +GR+V+V N+SWE  WQ LKDH +  G V++ +I     GRSKG A V + + ++A  AI +L  +DL GR I VRED
Sbjct:   37 VYVGNLSWECSWQDLKDHMRGPGGDLDVVYSEVMYDGGGRSKGCALVEYSSPQFATRAIEELHDTDIRGRKIFVREDREDS-------------------------------------------RVYVGNLSWDAAWQDVKDHMRGPNQDMDVKHVDVLLDPVGRSKGCAIVEYSSPAEAQRAIDELNHTDLLGRNIFVREDRENGISSNSNNGVAQVTFNGVNNNPAVIRGPFTVMRGNMRATPMPARVQMPRVTRGPQIRPPLRRPGQGRRVYVGNLSWECQWQDLKDHMRAAGEVRYADIMYGPDGRSKGCALVEYNTVEEAQKAIAELHDSDLMGRLIFVRED 340          
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: D8LGN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN3_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 9.010e-68
Identity = 138/368 (37.50%), Postives = 186/368 (50.54%), Query Frame = 1
Query:    1 VFVSNLAYDVQWQDLKDHMKN-AGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGD---------------------------------------AGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGR-PHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVREDNR 981
            V+V NLA+DV WQDLKDHM+   G VIRADV     GRS+G GIVE+++P +A  AI QL+ +EL  R I VRE+R                                         A   G  +G + G  +    M Q             G  P  +  ++YVGNL+W  +WQ+LKDHMR  G V   D+ Q+  GRSKGC +VEYE  + A+ AIR+L++T L GR IFVREDRE+  P                 R                        E   GRQ++V N+S+ET W  LKDHF+  G V+  ++  D   RSKG+ TVRF ++++A  AI +L+GT+L  R+I VRED++
Sbjct:  153 VYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAIEQLNNSELKNRMIFVREDRESGTPGXXXXXXXXXXXXXXXXXMVGQMQMGPMGAFGGQPFAAGPGALMGQSMGGHMQQMQMHQXXXXXXXXXXXXXGAMPQATGNRIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIRELNNTALGGRPIFVREDREQQNP-----------------RQXXXXXXXXXXXXXXXXXXXXXXXENLAGRQLYVGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGTELGSRQIEVREDSK 503          
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Match: A0A2D4CCJ1_PYTIN (RNA binding protein putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCJ1_PYTIN)

HSP 1 Score: 225 bits (573), Expect = 1.010e-67
Identity = 137/346 (39.60%), Postives = 188/346 (54.34%), Query Frame = 1
Query:    1 VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPYEARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQYPVIVTSSCFFFSGRPHNSIPQ-VYVGNLSWECQWQDLKDHMRAAGNVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEVRPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTG---------------SKRMGQLHEGA-----EGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRIGVRED 975
            V+V NLA+ VQWQDLKD+M++AG V R  +     GRSKG  +V F    +A+ AI  L++TE  GR + VRE+R        G     G  ++P       ++        +G P  ++ + V+VGNLSW  +WQDLKD+ + AG V   D+ +E GGRS+G  +VE+ T +EA  AI  LHD+EL GR IFVREDRE     +G +S +      A    IP PL   P  G  G               S++M      A     EG  + V N+ +   WQ LKDHF++ G V+ VEIP+ + G+S+GY  VRF    DA  AI++ +GT+L GR I VR D
Sbjct:   25 VYVGNLAWAVQWQDLKDYMRSAGEVERVVLMEDHAGRSKGCAVVTFVTEADAQRAIHTLNDTEFHGRXLFVREDRDPQSGSNTGAWNPPGPPLAP-------LLPPPHSVQDAGPPAPTLGRRVFVGNLSWNIKWQDLKDYFKKAGRVLHADVMEEAGGRSRGFGLVEFSTAEEAQQAIAMLHDSELDGRRIFVREDRENE---SGSISSI------AKRGNIPPPLAPIPIPGSNGAPGMLPXXXXXXXXYSQQMPPSSSYAPAANNEGTTLFVGNLPYGVNWQELKDHFREAGDVEHVEIPQLSDGKSRGYGIVRFVHPDDAMHAIDRFNGTELKGRTIIVRHD 354          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1382.2990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G466_ECTSI2.960e-17879.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2KX18_9STRA5.920e-7543.07Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1DBL6_CYCTE1.110e-7341.28Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4IUY5_9STRA4.730e-7342.38Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S4IV24_9STRA1.430e-7142.38Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S1BM28_9STRA3.950e-7042.46Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A6H5J8N0_9PHAE5.770e-6938.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0DYZ3_9CRYP8.800e-6938.90Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
D8LGN3_ECTSI9.010e-6837.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4CCJ1_PYTIN1.010e-6739.60RNA binding protein putative (Fragment) n=1 Tax=Py... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1382contigEcto-sp13_S_contig1382:448..1896 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score508.1
Seed ortholog evalue3.2e-141
Seed eggNOG ortholog2880.D7G466
Model size992
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.RNA binding
EggNOG OGsKOG0118@1,KOG0118@2759
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-02_001450.1
Cds size990
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462737.1893892-CDS-Ecto-sp13_S_contig1382:447..6001681462737.1893892-CDS-Ecto-sp13_S_contig1382:447..600Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1382 448..600 +
1681462737.2021492-CDS-Ecto-sp13_S_contig1382:842..9651681462737.2021492-CDS-Ecto-sp13_S_contig1382:842..965Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1382 843..965 +
1681462737.2122228-CDS-Ecto-sp13_S_contig1382:1097..14341681462737.2122228-CDS-Ecto-sp13_S_contig1382:1097..1434Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1382 1098..1434 +
1681462737.221996-CDS-Ecto-sp13_S_contig1382:1519..18961681462737.221996-CDS-Ecto-sp13_S_contig1382:1519..1896Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1382 1520..1896 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1382.2990.1prot_Ecto-sp13_S_contig1382.2990.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1382 448..1896 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1382.2990.1

>prot_Ecto-sp13_S_contig1382.2990.1 ID=prot_Ecto-sp13_S_contig1382.2990.1|Name=mRNA_Ecto-sp13_S_contig1382.2990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=330bp
VFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGIVEFSKPY
EARNAISQLSETELMGRPIQVREERGDAGNHGRGVGGAAGAKISPNSMGQ
YPVIVTSSCFFFSGRPHNSIPQVYVGNLSWECQWQDLKDHMRAAGNVKFV
DLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEV
RPGAGDLSCVCRPHFCANLRMIPMPLFMCPRQGPTGSKRMGQLHEGAEGR
QVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSE
QDAADAINQLDGTDLDGRRIGVREDNRPF*
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mRNA from alignment at Ecto-sp13_S_contig1382:448..1896+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1382.2990.1 ID=mRNA_Ecto-sp13_S_contig1382.2990.1|Name=mRNA_Ecto-sp13_S_contig1382.2990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1449bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1382:448..1896+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTTCGTGAGCAACCTGGCATACGACGTCCAGTGGCAAGATCTCAAAGA CCACATGAAAAATGCCGGCTCGGTGATTAGGGCCGATGTTTTTGTCGGCC CCGACGGCCGCAGCAAAGGACTCGGAATTGTGGAGTTCTCCAAGCCCTAC GAGGTAAAGCTGTTGAGACGAGGAAGGTGTGCTGTGTCGGGGTAAATGTT GTTGTTGACGGCAGAAGATTCTCGGGGGTTGCGCCCTCGAAATGCCGTAA TGTTTCCATGAGATCAACGGCTCGAATGCTCTTGGTTCGGGGAACCGGCT CCAACTGCTCACGCGCTGCTGCGGGACCGCGCGAAGGGAGGATCATGGCA ATGTCATTGACGTTGTGTACTCTTACGATGCTCATCTACATGCAGGCAAG GAATGCTATCAGCCAGCTCAGCGAAACTGAGCTTATGGGCCGGCCAATCC AAGTTAGGGAAGAACGAGGAGATGCTGGAAACCATGGACGCGGAGTGGGC GGGGCTGCGGGTGCCAAGGTACACAGCGCTCTCAAACACTGTGGGATCAA GCGATATACCCCACCTTTAGCCACTCCGAAAATTGTTCGACTCTCGAACT AAATCGTTGATCTTCGAAGCAGTGAGTGTGTGGACCGAACTCTGTACGAG ATCTCCCCAAATAGTATGGGTCAATACCCTGTTATCGTAACTTCTTCCTG TTTTTTTTTTTCTGGGCGACCGCACAACTCCATTCCTCAGGTTTATGTTG GCAACTTGAGCTGGGAATGCCAATGGCAAGACCTGAAGGATCACATGAGA GCGGCCGGCAATGTAAAGTTCGTCGATTTGTTCCAAGAGCCTGGCGGCAG GTCGAAGGGATGTGCCGTGGTGGAGTACGAAACGCCTCAAGAAGCGCACA GCGCCATTCGGGACCTACACGACACAGAGCTCTTGGGGCGTCTGATTTTC GTGAGGGAGGACCGTGAAGAGGTGAGACCAGGTGCGGGTTAATTTTTGTT TCCCCGGAACCGGAGTAGTGGTCGGGCGGCTTTGCTGGCCTTGAATGATC TGAGAAAGGTTCGCGAGGGAAGGAGATCTCTCTTGTGTATGCCGACCACA CTTTTGTGCAAACCTACGGATGATCCCCATGCCTCTCTTTATGTGTCCTC GGCAGGGACCCACTGGTAGCAAACGAATGGGTCAGCTGCATGAAGGGGCA GAGGGACGTCAGGTTCATGTTTCAAACGTGAGCTGGGAGACGGGGTGGCA GAGCCTCAAGGACCACTTCAAGCAATGTGGAAGGGTGCAATTCGTGGAGA TCCCCGAGGACGCACAAGGCCGCTCGAAAGGATATGCAACCGTGCGCTTC GGATCGGAACAAGATGCTGCTGATGCCATCAACCAGCTCGACGGCACAGA CCTTGATGGACGCCGCATTGGTGTTCGCGAAGACAACCGGCCCTTCTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1382:448..1896+

>mRNA_Ecto-sp13_S_contig1382.2990.1 ID=mRNA_Ecto-sp13_S_contig1382.2990.1|Name=mRNA_Ecto-sp13_S_contig1382.2990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1382:448..1896+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTTCGTGAGCAACCTGGCATACGACGTCCAGTGGCAAGATCTCAAAGA
CCACATGAAAAATGCCGGCTCGGTGATTAGGGCCGATGTTTTTGTCGGCC
CCGACGGCCGCAGCAAAGGACTCGGAATTGTGGAGTTCTCCAAGCCCTAC
GAGGCAAGGAATGCTATCAGCCAGCTCAGCGAAACTGAGCTTATGGGCCG
GCCAATCCAAGTTAGGGAAGAACGAGGAGATGCTGGAAACCATGGACGCG
GAGTGGGCGGGGCTGCGGGTGCCAAGATCTCCCCAAATAGTATGGGTCAA
TACCCTGTTATCGTAACTTCTTCCTGTTTTTTTTTTTCTGGGCGACCGCA
CAACTCCATTCCTCAGGTTTATGTTGGCAACTTGAGCTGGGAATGCCAAT
GGCAAGACCTGAAGGATCACATGAGAGCGGCCGGCAATGTAAAGTTCGTC
GATTTGTTCCAAGAGCCTGGCGGCAGGTCGAAGGGATGTGCCGTGGTGGA
GTACGAAACGCCTCAAGAAGCGCACAGCGCCATTCGGGACCTACACGACA
CAGAGCTCTTGGGGCGTCTGATTTTCGTGAGGGAGGACCGTGAAGAGGTG
AGACCAGGTGCGGGAGATCTCTCTTGTGTATGCCGACCACACTTTTGTGC
AAACCTACGGATGATCCCCATGCCTCTCTTTATGTGTCCTCGGCAGGGAC
CCACTGGTAGCAAACGAATGGGTCAGCTGCATGAAGGGGCAGAGGGACGT
CAGGTTCATGTTTCAAACGTGAGCTGGGAGACGGGGTGGCAGAGCCTCAA
GGACCACTTCAAGCAATGTGGAAGGGTGCAATTCGTGGAGATCCCCGAGG
ACGCACAAGGCCGCTCGAAAGGATATGCAACCGTGCGCTTCGGATCGGAA
CAAGATGCTGCTGATGCCATCAACCAGCTCGACGGCACAGACCTTGATGG
ACGCCGCATTGGTGTTCGCGAAGACAACCGGCCCTTCTAA
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